RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 AGRPO00253 132 aa4.98□□□□□ -1.61
VPS13B-209ENST00000521559 BUB1BO60566 1050 aaPredicted RBP4.98□□□□□ -1.61
VPS13B-209ENST00000521559 TACR1P25103 407 aa4.98□□□□□ -1.61
VPS13B-209ENST00000521559 HOXC12P31275 282 aa4.98□□□□□ -1.61
VPS13B-209ENST00000521559 AFF3P51826 1226 aaKnown RBP4.98□□□□□ -1.61
VPS13B-209ENST00000521559 SCRN1Q12765 414 aa4.98□□□□□ -1.61
VPS13B-209ENST00000521559 SSPNQ14714 243 aa4.98□□□□□ -1.61
VPS13B-209ENST00000521559 SLC9A5Q14940 896 aa4.98□□□□□ -1.61
VPS13B-209ENST00000521559 GTF2IRD2BQ6EKJ0 949 aa4.98□□□□□ -1.61
VPS13B-209ENST00000521559 CNKSR3Q6P9H4 555 aa4.98□□□□□ -1.61
VPS13B-209ENST00000521559 C6orf15Q6UXA7 325 aaPredicted RBP4.98□□□□□ -1.61
VPS13B-209ENST00000521559 GTF2IRD2Q86UP8 949 aa4.98□□□□□ -1.61
VPS13B-209ENST00000521559 CPNE8Q86YQ8 564 aa4.98□□□□□ -1.61
VPS13B-209ENST00000521559 COPS5Q92905 334 aa4.98□□□□□ -1.61
VPS13B-209ENST00000521559 RNF38Q9H0F5 515 aa4.98□□□□□ -1.61
VPS13B-209ENST00000521559 EPN3Q9H201 632 aa4.98□□□□□ -1.61
VPS13B-209ENST00000521559 PCDHA5Q9Y5H7 936 aa4.98□□□□□ -1.61
VPS13B-209ENST00000521559 SYNJ2O15056 1496 aa4.98□□□□□ -1.61
VPS13B-209ENST00000521559 IRS2Q9Y4H2 1338 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 ZBTB7AO95365 584 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 CPP00450 1065 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 FGRP09769 529 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 GLI4P10075 376 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 DNAJA1P31689 397 aaKnown RBP4.97□□□□□ -1.61
VPS13B-209ENST00000521559 ETFBP38117 255 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 PRR5P85299 388 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 ZNF200P98182 395 aaPredicted RBP4.97□□□□□ -1.61
VPS13B-209ENST00000521559 EEPD1Q7L9B9 569 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 IGDCC3Q8IVU1 814 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 MRGPRX3Q96LB0 322 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 TINF2Q9BSI4 451 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 NKX2-4Q9H2Z4 354 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 CLEC1BQ9P126 229 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 FAN1Q9Y2M0 1017 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 RWDD3Q9Y3V2 267 aa4.97□□□□□ -1.61
VPS13B-209ENST00000521559 PRXQ9BXM0 1461 aa4.96□□□□□ -1.62
VPS13B-209ENST00000521559 ZC3H12DA2A288 527 aaKnown RBP4.96□□□□□ -1.62
VPS13B-209ENST00000521559 C7orf72A4D263 438 aa4.96□□□□□ -1.62
VPS13B-209ENST00000521559 SUSD5O60279 629 aa4.96□□□□□ -1.62
VPS13B-209ENST00000521559 NCAM1P13591 858 aa4.96□□□□□ -1.62
VPS13B-209ENST00000521559 PLS3P13797 630 aa4.96□□□□□ -1.62
VPS13B-209ENST00000521559 GTF2A2P52657 109 aa4.96□□□□□ -1.62
VPS13B-209ENST00000521559 CAP1Q01518 475 aa4.96□□□□□ -1.62
VPS13B-209ENST00000521559 E4F1Q66K89 784 aaPredicted RBP4.96□□□□□ -1.62
VPS13B-209ENST00000521559 FAM129CQ86XR2 697 aa4.96□□□□□ -1.62
VPS13B-209ENST00000521559 ALG3Q92685 438 aa4.96□□□□□ -1.62
VPS13B-209ENST00000521559 DACT3Q96B18 629 aaPredicted RBP4.96□□□□□ -1.62
VPS13B-209ENST00000521559 ZNF428Q96B54 188 aa4.96□□□□□ -1.62
VPS13B-209ENST00000521559 TSPAN17Q96FV3 270 aa4.96□□□□□ -1.62
VPS13B-209ENST00000521559 GMLQ99445 158 aa4.96□□□□□ -1.62
VPS13B-209ENST00000521559 ZNF408Q9H9D4 720 aa4.96□□□□□ -1.62
VPS13B-209ENST00000521559 GULP1Q9UBP9 304 aa4.96□□□□□ -1.62
VPS13B-209ENST00000521559 GRIN2AQ12879 1464 aa4.95□□□□□ -1.62
VPS13B-209ENST00000521559 RAPGEF2Q9Y4G8 1499 aa4.95□□□□□ -1.62
VPS13B-209ENST00000521559 MYO1BO43795 1136 aa4.95□□□□□ -1.62
VPS13B-209ENST00000521559 SASH1O94885 1247 aa4.95□□□□□ -1.62
VPS13B-209ENST00000521559 THBDP07204 575 aa4.95□□□□□ -1.62
VPS13B-209ENST00000521559 SNRPB2P08579 225 aaKnown RBP4.95□□□□□ -1.62
VPS13B-209ENST00000521559 NCKAP1LP55160 1127 aa4.95□□□□□ -1.62
VPS13B-209ENST00000521559 KCNAB2Q13303 367 aa4.95□□□□□ -1.62
VPS13B-209ENST00000521559 MCF2L2Q86YR7 1114 aa4.95□□□□□ -1.62
VPS13B-209ENST00000521559 DCP2Q8IU60 420 aaKnown RBP4.95□□□□□ -1.62
VPS13B-209ENST00000521559 TMEFF1Q8IYR6 380 aa4.95□□□□□ -1.62
VPS13B-209ENST00000521559 PANK1Q8TE04 598 aa4.95□□□□□ -1.62
VPS13B-209ENST00000521559 PWWP2AQ96N64 755 aa4.95□□□□□ -1.62
VPS13B-209ENST00000521559 MTA3Q9BTC8 594 aa4.95□□□□□ -1.62
VPS13B-209ENST00000521559 ZCCHC4Q9H5U6 513 aa4.95□□□□□ -1.62
VPS13B-209ENST00000521559 GPRC5CQ9NQ84 441 aa4.95□□□□□ -1.62
VPS13B-209ENST00000521559 NUP160Q12769 1436 aa4.95□□□□□ -1.62
VPS13B-209ENST00000521559 FUCA1P04066 466 aa4.94□□□□□ -1.62
VPS13B-209ENST00000521559 SCG5P05408 212 aa4.94□□□□□ -1.62
VPS13B-209ENST00000521559 ITGAVP06756 1048 aa4.94□□□□□ -1.62
VPS13B-209ENST00000521559 BMP7P18075 431 aa4.94□□□□□ -1.62
VPS13B-209ENST00000521559 IGFBP6P24592 240 aaPredicted RBP4.94□□□□□ -1.62
VPS13B-209ENST00000521559 RPL11P62913 178 aaKnown RBP4.94□□□□□ -1.62
VPS13B-209ENST00000521559 WWC2Q6AWC2 1192 aa4.94□□□□□ -1.62
VPS13B-209ENST00000521559 TTLL10Q6ZVT0 673 aa4.94□□□□□ -1.62
VPS13B-209ENST00000521559 ZNF227Q86WZ6 799 aa4.94□□□□□ -1.62
VPS13B-209ENST00000521559 SP8Q8IXZ3 490 aa4.94□□□□□ -1.62
VPS13B-209ENST00000521559 BTN2A2Q8WVV5 523 aa4.94□□□□□ -1.62
VPS13B-209ENST00000521559 DIO2Q92813 273 aa4.94□□□□□ -1.62
VPS13B-209ENST00000521559 AP5M1Q9H0R1 490 aa4.94□□□□□ -1.62
VPS13B-209ENST00000521559 PCDH18Q9HCL0 1135 aa4.94□□□□□ -1.62
VPS13B-209ENST00000521559 PARD6AQ9NPB6 346 aa4.94□□□□□ -1.62
VPS13B-209ENST00000521559 TIMM13Q9Y5L4 95 aaPredicted RBP4.94□□□□□ -1.62
VPS13B-209ENST00000521559 ADAMTS12P58397 1594 aa4.94□□□□□ -1.62
VPS13B-209ENST00000521559 IQCA1LA6NCM1 817 aa4.93□□□□□ -1.62
VPS13B-209ENST00000521559 B2RBV5 119 aa4.93□□□□□ -1.62
VPS13B-209ENST00000521559 MEFVO15553 781 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-209ENST00000521559 GJB6O95452 261 aa4.93□□□□□ -1.62
VPS13B-209ENST00000521559 INHBBP09529 407 aa4.93□□□□□ -1.62
VPS13B-209ENST00000521559 ECI1P42126 302 aa4.93□□□□□ -1.62
VPS13B-209ENST00000521559 KCNJ6P48051 423 aa4.93□□□□□ -1.62
VPS13B-209ENST00000521559 FOXO4P98177 505 aa4.93□□□□□ -1.62
VPS13B-209ENST00000521559 ACBD5Q5T8D3 534 aaPredicted RBP4.93□□□□□ -1.62
VPS13B-209ENST00000521559 MROH9Q5TGP6 573 aa4.93□□□□□ -1.62
VPS13B-209ENST00000521559 ANKS3Q6ZW76 656 aa4.93□□□□□ -1.62
VPS13B-209ENST00000521559 LINC01356Q8N9X3 169 aa4.93□□□□□ -1.62
VPS13B-209ENST00000521559 MARCH10Q8NA82 808 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms