RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 TBX21Q9UL17 535 aa25.02■■□□□ 1.6
HOXA3-204ENST00000521401 LTBP2Q14767 1821 aa25.01■■□□□ 1.59
HOXA3-204ENST00000521401 PNMA6FA0A0J9YX94 578 aa25.01■■□□□ 1.59
HOXA3-204ENST00000521401 B4DLN1 442 aa25.01■■□□□ 1.59
HOXA3-204ENST00000521401 ZEB2O60315 1214 aa25.01■■□□□ 1.59
HOXA3-204ENST00000521401 ARIH2O95376 493 aa25.01■■□□□ 1.59
HOXA3-204ENST00000521401 LIFRP42702 1097 aa25.01■■□□□ 1.59
HOXA3-204ENST00000521401 MRPL12P52815 198 aaKnown RBP25.01■■□□□ 1.59
HOXA3-204ENST00000521401 FAM126BQ8IXS8 530 aa25.01■■□□□ 1.59
HOXA3-204ENST00000521401 TMTC2Q8N394 836 aa25.01■■□□□ 1.59
HOXA3-204ENST00000521401 SCFD2Q8WU76 684 aa25.01■■□□□ 1.59
HOXA3-204ENST00000521401 COPS5Q92905 334 aa25.01■■□□□ 1.59
HOXA3-204ENST00000521401 IWS1Q96ST2 819 aa25.01■■□□□ 1.59
HOXA3-204ENST00000521401 NKRFO15226 690 aaKnown RBP eCLIP25■■□□□ 1.595e-10■□□□□ 10.8
HOXA3-204ENST00000521401 PPP2R5BQ15173 497 aa25■■□□□ 1.59
HOXA3-204ENST00000521401 CCDC62Q6P9F0 684 aa25■■□□□ 1.59
HOXA3-204ENST00000521401 RASEFQ8IZ41 740 aa25■■□□□ 1.59
HOXA3-204ENST00000521401 OR6J1Q8NGC5 347 aa25■■□□□ 1.59
HOXA3-204ENST00000521401 LRRC2Q9BYS8 371 aa25■■□□□ 1.59
HOXA3-204ENST00000521401 PXMP2Q9NR77 195 aa25■■□□□ 1.59
HOXA3-204ENST00000521401 MAP3K20Q9NYL2 800 aaKnown RBP25■■□□□ 1.59
HOXA3-204ENST00000521401 MROH7Q68CQ1 1323 aa25■■□□□ 1.59
HOXA3-204ENST00000521401 EIF2AK2P19525 551 aaKnown RBP24.99■■□□□ 1.59
HOXA3-204ENST00000521401 TSGA10IPQ3SY00 556 aa24.99■■□□□ 1.59
HOXA3-204ENST00000521401 C9orf50Q5SZB4 431 aa24.99■■□□□ 1.59
HOXA3-204ENST00000521401 ARHGEF16Q5VV41 709 aa24.99■■□□□ 1.59
HOXA3-204ENST00000521401 CTCFLQ8NI51 663 aaPredicted RBP24.99■■□□□ 1.59
HOXA3-204ENST00000521401 SPZ1Q9BXG8 430 aa24.99■■□□□ 1.59
HOXA3-204ENST00000521401 CD4P01730 458 aa24.98■■□□□ 1.59
HOXA3-204ENST00000521401 TXNP10599 105 aaKnown RBP24.98■■□□□ 1.59
HOXA3-204ENST00000521401 RAG1P15918 1043 aa24.98■■□□□ 1.59
HOXA3-204ENST00000521401 SMARCA1P28370 1054 aa24.98■■□□□ 1.59
HOXA3-204ENST00000521401 EPHB4P54760 987 aa24.98■■□□□ 1.59
HOXA3-204ENST00000521401 PSMC6P62333 389 aa24.98■■□□□ 1.59
HOXA3-204ENST00000521401 ITGA7Q13683 1181 aa24.98■■□□□ 1.59
HOXA3-204ENST00000521401 TTLL4Q14679 1199 aa24.98■■□□□ 1.59
HOXA3-204ENST00000521401 SHHQ15465 462 aa24.98■■□□□ 1.59
HOXA3-204ENST00000521401 RNF20Q5VTR2 975 aa24.98■■□□□ 1.59
HOXA3-204ENST00000521401 SAMD3Q8N6K7 520 aa24.98■■□□□ 1.59
HOXA3-204ENST00000521401 CCDC69A6NI79 296 aa24.97■■□□□ 1.59
HOXA3-204ENST00000521401 PLEKHA8P1O95397 391 aa24.97■■□□□ 1.59
HOXA3-204ENST00000521401 NR3C2P08235 984 aa24.97■■□□□ 1.59
HOXA3-204ENST00000521401 RXRAP19793 462 aa24.97■■□□□ 1.59
HOXA3-204ENST00000521401 HOXA13P31271 388 aaPredicted RBP24.97■■□□□ 1.59
HOXA3-204ENST00000521401 KIF5BP33176 963 aa24.97■■□□□ 1.59
HOXA3-204ENST00000521401 STXBP2Q15833 593 aa24.97■■□□□ 1.59
HOXA3-204ENST00000521401 NFXL1Q6ZNB6 911 aa24.97■■□□□ 1.59
HOXA3-204ENST00000521401 SGMS1Q86VZ5 419 aa24.97■■□□□ 1.59
HOXA3-204ENST00000521401 SRBD1Q8N5C6 995 aaKnown RBP24.97■■□□□ 1.59
HOXA3-204ENST00000521401 PIBF1Q8WXW3 757 aa24.97■■□□□ 1.59
HOXA3-204ENST00000521401 NEK1Q96PY6 1258 aa24.97■■□□□ 1.59
HOXA3-204ENST00000521401 A6NJR5 290 aa24.96■■□□□ 1.59
HOXA3-204ENST00000521401 TIMP1P01033 207 aa24.96■■□□□ 1.59
HOXA3-204ENST00000521401 CPT1AP50416 773 aa24.96■■□□□ 1.59
HOXA3-204ENST00000521401 PURAQ00577 322 aaKnown RBP24.96■■□□□ 1.59
HOXA3-204ENST00000521401 EXOSC10Q01780 885 aaKnown RBP24.96■■□□□ 1.59
HOXA3-204ENST00000521401 TRAF1Q13077 416 aa24.96■■□□□ 1.59
HOXA3-204ENST00000521401 ADCK5Q3MIX3 580 aa24.96■■□□□ 1.59
HOXA3-204ENST00000521401 SEPT14Q6ZU15 432 aa24.96■■□□□ 1.59
HOXA3-204ENST00000521401 LZTS2Q9BRK4 669 aa24.96■■□□□ 1.59
HOXA3-204ENST00000521401 PDCD2LQ9BRP1 358 aa24.96■■□□□ 1.59
HOXA3-204ENST00000521401 GCOM1H8Y6P7 765 aaPredicted RBP24.95■■□□□ 1.58
HOXA3-204ENST00000521401 EIF3JO75822 258 aaKnown RBP24.95■■□□□ 1.58
HOXA3-204ENST00000521401 POLR2MP0CAP2 368 aa24.95■■□□□ 1.58
HOXA3-204ENST00000521401 GPR153Q6NV75 609 aa24.95■■□□□ 1.58
HOXA3-204ENST00000521401 RAB11FIP4Q86YS3 637 aa24.95■■□□□ 1.58
HOXA3-204ENST00000521401 POLR3EQ9NVU0 708 aa24.95■■□□□ 1.58
HOXA3-204ENST00000521401 RGS20O76081 388 aa24.94■■□□□ 1.58
HOXA3-204ENST00000521401 MYL3P08590 195 aa24.94■■□□□ 1.58
HOXA3-204ENST00000521401 GNAQP50148 359 aa24.94■■□□□ 1.58
HOXA3-204ENST00000521401 LY6KQ17RY6 165 aa24.94■■□□□ 1.58
HOXA3-204ENST00000521401 CMTR1Q8N1G2 835 aaKnown RBP24.94■■□□□ 1.58
HOXA3-204ENST00000521401 IL31RAQ8NI17 732 aa24.94■■□□□ 1.58
HOXA3-204ENST00000521401 KCNB2Q92953 911 aa24.94■■□□□ 1.58
HOXA3-204ENST00000521401 SEZ6LQ9BYH1 1024 aa24.94■■□□□ 1.58
HOXA3-204ENST00000521401 SLC12A7Q9Y666 1083 aa24.94■■□□□ 1.58
HOXA3-204ENST00000521401 TLR3O15455 904 aaKnown RBP24.93■■□□□ 1.58
HOXA3-204ENST00000521401 CALM1P0DP23 149 aa24.93■■□□□ 1.58
HOXA3-204ENST00000521401 CALM2P0DP24 149 aa24.93■■□□□ 1.58
HOXA3-204ENST00000521401 CALM3P0DP25 149 aa24.93■■□□□ 1.58
HOXA3-204ENST00000521401 ARHGAP1Q07960 439 aa24.93■■□□□ 1.58
HOXA3-204ENST00000521401 PGM5Q15124 567 aa24.93■■□□□ 1.58
HOXA3-204ENST00000521401 DHX32Q7L7V1 743 aaKnown RBP24.93■■□□□ 1.58
HOXA3-204ENST00000521401 VSIG10LQ86VR7 867 aa24.93■■□□□ 1.58
HOXA3-204ENST00000521401 RRP36Q96EU6 259 aaKnown RBP24.93■■□□□ 1.58
HOXA3-204ENST00000521401 TCEANC2Q96MN5 208 aa24.93■■□□□ 1.58
HOXA3-204ENST00000521401 MTG1Q9BT17 334 aaPredicted RBP24.93■■□□□ 1.58
HOXA3-204ENST00000521401 DDX41Q9UJV9 622 aaKnown RBP24.93■■□□□ 1.58
HOXA3-204ENST00000521401 B4GALT4O60513 344 aa24.92■■□□□ 1.58
HOXA3-204ENST00000521401 FPGSQ05932 587 aa24.92■■□□□ 1.58
HOXA3-204ENST00000521401 MFSD5Q6N075 450 aa24.92■■□□□ 1.58
HOXA3-204ENST00000521401 FANCBQ8NB91 859 aa24.92■■□□□ 1.58
HOXA3-204ENST00000521401 TRPV6Q9H1D0 765 aa24.92■■□□□ 1.58
HOXA3-204ENST00000521401 BAZ2BQ9UIF8 2168 aaKnown RBP24.91■■□□□ 1.58
HOXA3-204ENST00000521401 GH1P01241 217 aa24.91■■□□□ 1.58
HOXA3-204ENST00000521401 NEFLP07196 543 aa24.91■■□□□ 1.58
HOXA3-204ENST00000521401 MYCLP12524 364 aaPredicted RBP24.91■■□□□ 1.58
HOXA3-204ENST00000521401 TMTC3Q6ZXV5 915 aa24.91■■□□□ 1.58
HOXA3-204ENST00000521401 FCHSD1Q86WN1 690 aa24.91■■□□□ 1.58
HOXA3-204ENST00000521401 AFG1LQ8WV93 481 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms