RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 ZBTB7AO95365 584 aa8.25□□□□□ -1.09
PABPC1-216ENST00000520868 NME1P15531 152 aaKnown RBP8.25□□□□□ -1.09
PABPC1-216ENST00000520868 ERVFC1P60507 584 aa8.25□□□□□ -1.09
PABPC1-216ENST00000520868 TMEM67Q5HYA8 995 aa8.25□□□□□ -1.09
PABPC1-216ENST00000520868 NBPF12Q5TAG4 269 aaPredicted RBP8.25□□□□□ -1.09
PABPC1-216ENST00000520868 ARHGEF25Q86VW2 580 aa8.25□□□□□ -1.09
PABPC1-216ENST00000520868 DHX38Q92620 1227 aaKnown RBP8.25□□□□□ -1.09
PABPC1-216ENST00000520868 DDX41Q9UJV9 622 aaKnown RBP8.25□□□□□ -1.09
PABPC1-216ENST00000520868 OVOS2A0A0G2JMS6 1433 aa8.25□□□□□ -1.09
PABPC1-216ENST00000520868 OVOS2A0A0J9YW53 1432 aa8.25□□□□□ -1.09
PABPC1-216ENST00000520868 USP6P35125 1406 aa8.25□□□□□ -1.09
PABPC1-216ENST00000520868 OVOS2Q6IE36 1432 aa8.25□□□□□ -1.09
PABPC1-216ENST00000520868 TTC21BQ7Z4L5 1316 aa8.25□□□□□ -1.09
PABPC1-216ENST00000520868 EVC2Q86UK5 1308 aa8.25□□□□□ -1.09
PABPC1-216ENST00000520868 WDR17Q8IZU2 1322 aa8.25□□□□□ -1.09
PABPC1-216ENST00000520868 TOPAZ1Q8N9V7 1692 aa8.24□□□□□ -1.09
PABPC1-216ENST00000520868 TNFRSF10CO14798 259 aa8.24□□□□□ -1.09
PABPC1-216ENST00000520868 GLI1P08151 1106 aa8.24□□□□□ -1.09
PABPC1-216ENST00000520868 POLR2BP30876 1174 aaKnown RBP8.24□□□□□ -1.09
PABPC1-216ENST00000520868 NMIQ13287 307 aaPredicted RBP8.24□□□□□ -1.09
PABPC1-216ENST00000520868 MLANAQ16655 118 aa8.24□□□□□ -1.09
PABPC1-216ENST00000520868 ZNF654Q8IZM8 581 aa8.24□□□□□ -1.09
PABPC1-216ENST00000520868 SYTL5Q8TDW5 730 aaPredicted RBP8.24□□□□□ -1.09
PABPC1-216ENST00000520868 SIN3AQ96ST3 1273 aa8.24□□□□□ -1.09
PABPC1-216ENST00000520868 ZNRF3Q9ULT6 936 aa8.24□□□□□ -1.09
PABPC1-216ENST00000520868 PCDHA11Q9Y5I1 949 aa8.24□□□□□ -1.09
PABPC1-216ENST00000520868 RREB1Q92766 1687 aa8.24□□□□□ -1.09
PABPC1-216ENST00000520868 NUP188Q5SRE5 1749 aa8.23□□□□□ -1.09
PABPC1-216ENST00000520868 FARP2O94887 1054 aaPredicted RBP8.23□□□□□ -1.09
PABPC1-216ENST00000520868 TXNRD1Q16881 649 aa8.23□□□□□ -1.09
PABPC1-216ENST00000520868 KCNH5Q8NCM2 988 aa8.23□□□□□ -1.09
PABPC1-216ENST00000520868 MRRFQ96E11 262 aaKnown RBP8.23□□□□□ -1.09
PABPC1-216ENST00000520868 SPATA32Q96LK8 384 aa8.23□□□□□ -1.09
PABPC1-216ENST00000520868 FERD3LQ96RJ6 166 aa8.23□□□□□ -1.09
PABPC1-216ENST00000520868 STK32BQ9NY57 414 aa8.23□□□□□ -1.09
PABPC1-216ENST00000520868 SHISA3A0PJX4 238 aa8.22□□□□□ -1.09
PABPC1-216ENST00000520868 LRRC10BA6NIK2 292 aa8.22□□□□□ -1.09
PABPC1-216ENST00000520868 HK2P52789 917 aa8.22□□□□□ -1.09
PABPC1-216ENST00000520868 MESP2Q0VG99 397 aa8.22□□□□□ -1.09
PABPC1-216ENST00000520868 COL9A2Q14055 689 aaPredicted RBP8.22□□□□□ -1.09
PABPC1-216ENST00000520868 SLC15A2Q16348 729 aa8.22□□□□□ -1.09
PABPC1-216ENST00000520868 NBPF9Q3BBW0 867 aa8.22□□□□□ -1.09
PABPC1-216ENST00000520868 INTS3Q68E01 1043 aaKnown RBP8.22□□□□□ -1.09
PABPC1-216ENST00000520868 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.22□□□□□ -1.09
PABPC1-216ENST00000520868 OXR1Q8N573 874 aa8.22□□□□□ -1.09
PABPC1-216ENST00000520868 ABHD4Q8TB40 342 aa8.22□□□□□ -1.09
PABPC1-216ENST00000520868 DHRS1Q96LJ7 313 aa8.22□□□□□ -1.09
PABPC1-216ENST00000520868 ADAMTS10Q9H324 1103 aa8.22□□□□□ -1.09
PABPC1-216ENST00000520868 ANTXR1Q9H6X2 564 aa8.22□□□□□ -1.09
PABPC1-216ENST00000520868 KCNK12Q9HB15 430 aa8.22□□□□□ -1.09
PABPC1-216ENST00000520868 KIAA1210Q9ULL0 1709 aa8.22□□□□□ -1.09
PABPC1-216ENST00000520868 NINLQ9Y2I6 1382 aa8.22□□□□□ -1.09
PABPC1-216ENST00000520868 PARP4Q9UKK3 1724 aaKnown RBP8.21□□□□□ -1.09
PABPC1-216ENST00000520868 SLIT3O75094 1523 aa8.21□□□□□ -1.1
PABPC1-216ENST00000520868 HPXP02790 462 aa8.21□□□□□ -1.1
PABPC1-216ENST00000520868 TRHRP34981 398 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-216ENST00000520868 RACK1P63244 317 aaKnown RBP8.21□□□□□ -1.1
PABPC1-216ENST00000520868 JAG1P78504 1218 aa8.21□□□□□ -1.1
PABPC1-216ENST00000520868 MPZL3Q6UWV2 235 aa8.21□□□□□ -1.1
PABPC1-216ENST00000520868 RNF111Q6ZNA4 994 aa8.21□□□□□ -1.1
PABPC1-216ENST00000520868 PRR23BQ6ZRT6 265 aa8.21□□□□□ -1.1
PABPC1-216ENST00000520868 ZNF655Q8N720 491 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-216ENST00000520868 DAGLBQ8NCG7 672 aa8.21□□□□□ -1.1
PABPC1-216ENST00000520868 PDZD8Q8NEN9 1154 aa8.21□□□□□ -1.1
PABPC1-216ENST00000520868 MYLIPQ8WY64 445 aa8.21□□□□□ -1.1
PABPC1-216ENST00000520868 HDAC8Q9BY41 377 aa8.21□□□□□ -1.1
PABPC1-216ENST00000520868 CPSF1Q10570 1443 aaKnown RBP8.2□□□□□ -1.1
PABPC1-216ENST00000520868 ZGLP1P0C6A0 271 aa8.2□□□□□ -1.1
PABPC1-216ENST00000520868 DUSP4Q13115 394 aa8.2□□□□□ -1.1
PABPC1-216ENST00000520868 TAB3Q8N5C8 712 aaPredicted RBP8.2□□□□□ -1.1
PABPC1-216ENST00000520868 SLC6A18Q96N87 628 aa8.2□□□□□ -1.1
PABPC1-216ENST00000520868 SLC38A3Q99624 504 aa8.2□□□□□ -1.1
PABPC1-216ENST00000520868 TM9SF2Q99805 663 aa8.2□□□□□ -1.1
PABPC1-216ENST00000520868 SYT17Q9BSW7 474 aa8.2□□□□□ -1.1
PABPC1-216ENST00000520868 MKRN2Q9H000 416 aaKnown RBP8.2□□□□□ -1.1
PABPC1-216ENST00000520868 TTC21AQ8NDW8 1320 aa8.2□□□□□ -1.1
PABPC1-216ENST00000520868 ROCK2O75116 1388 aaKnown RBP8.2□□□□□ -1.1
PABPC1-216ENST00000520868 KTN1Q86UP2 1357 aaKnown RBP8.2□□□□□ -1.1
PABPC1-216ENST00000520868 PEAK1Q9H792 1746 aa8.2□□□□□ -1.1
PABPC1-216ENST00000520868 FITM1A5D6W6 292 aa8.19□□□□□ -1.1
PABPC1-216ENST00000520868 TEKQ02763 1124 aa8.19□□□□□ -1.1
PABPC1-216ENST00000520868 METTL16Q86W50 562 aaKnown RBP8.19□□□□□ -1.1
PABPC1-216ENST00000520868 SPPL2CQ8IUH8 684 aa8.19□□□□□ -1.1
PABPC1-216ENST00000520868 LILRA2Q8N149 483 aa8.19□□□□□ -1.1
PABPC1-216ENST00000520868 SLC9A7Q96T83 725 aa8.19□□□□□ -1.1
PABPC1-216ENST00000520868 UTRNP46939 3433 aa8.19□□□□□ -1.1
PABPC1-216ENST00000520868 COL18A1P39060 1754 aa8.19□□□□□ -1.1
PABPC1-216ENST00000520868 CCDC7Q96M83 1385 aa8.19□□□□□ -1.1
PABPC1-216ENST00000520868 LRRC37A3O60309 1634 aa8.18□□□□□ -1.1
PABPC1-216ENST00000520868 QRICH2Q9H0J4 1663 aa8.18□□□□□ -1.1
PABPC1-216ENST00000520868 SSU72P8A0A1W2PR75 194 aa8.18□□□□□ -1.1
PABPC1-216ENST00000520868 PCBP3P57721 371 aaKnown RBP8.18□□□□□ -1.1
PABPC1-216ENST00000520868 CHRNEQ04844 493 aa8.18□□□□□ -1.1
PABPC1-216ENST00000520868 PAK2Q13177 524 aa8.18□□□□□ -1.1
PABPC1-216ENST00000520868 FZD5Q13467 585 aa8.18□□□□□ -1.1
PABPC1-216ENST00000520868 PKN1Q16512 942 aa8.18□□□□□ -1.1
PABPC1-216ENST00000520868 FBXW10Q5XX13 1052 aa8.18□□□□□ -1.1
PABPC1-216ENST00000520868 NME9Q86XW9 330 aa8.18□□□□□ -1.1
PABPC1-216ENST00000520868 KSR1Q8IVT5 923 aa8.18□□□□□ -1.1
PABPC1-216ENST00000520868 TMEM192Q8IY95 271 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms