RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 TBC1D5Q92609 795 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 HHIPL1Q96JK4 782 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 ANO3Q9BYT9 981 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 MAP3K20Q9NYL2 800 aaKnown RBP9.71□□□□□ -0.86
VAPB-206ENST00000520497 BTBD7Q9P203 1132 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 PCDHA7Q9UN72 937 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 CEP131Q9UPN4 1083 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 RIPK3Q9Y572 518 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 CTDP1Q9Y5B0 961 aaPredicted RBP9.71□□□□□ -0.86
VAPB-206ENST00000520497 CASP8AP2Q9UKL3 1982 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 CCDC85CA6NKD9 419 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 BTBD19C9JJ37 291 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 GCOM1H8Y6P7 765 aaPredicted RBP9.7□□□□□ -0.86
VAPB-206ENST00000520497 CFBP00751 764 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 SLC10A3P09131 477 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 POLR2MP0CAP2 368 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 ALAS1P13196 640 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 ATP2B1P20020 1258 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 OSBPP22059 807 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 HOXA13P31271 388 aaPredicted RBP9.7□□□□□ -0.86
VAPB-206ENST00000520497 SREBF1P36956 1147 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 STAT3P40763 770 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 ZNF157P51786 506 aaPredicted RBP9.7□□□□□ -0.86
VAPB-206ENST00000520497 ZNF174Q15697 407 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 AXDND1Q5T1B0 1012 aaPredicted RBP9.7□□□□□ -0.86
VAPB-206ENST00000520497 L1TD1Q5T7N2 865 aaKnown RBP9.7□□□□□ -0.86
VAPB-206ENST00000520497 RGMBQ6NW40 437 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.7□□□□□ -0.86
VAPB-206ENST00000520497 RIOX2Q8IUF8 465 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 C4orf32Q8N8J7 132 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 TRERF1Q96PN7 1200 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 BEGAINQ9BUH8 593 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 RNF146Q9NTX7 359 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 PNMA3Q9UL41 463 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 FRMPD4Q14CM0 1322 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 RPTORQ8N122 1335 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 MYH11P35749 1972 aa9.7□□□□□ -0.86
VAPB-206ENST00000520497 A0A1W2PQ27 194 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 A0A1W2PQ64 194 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 A0A1W2PQD8 194 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 SPDYE3A6NKU9 549 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 SPDYE4A6NLX3 237 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 PDHXO00330 501 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 CYP3A4P08684 503 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 GCFC2P16383 781 aaKnown RBP9.69□□□□□ -0.86
VAPB-206ENST00000520497 PTPREP23469 700 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 MARCKSP29966 332 aaPredicted RBP9.69□□□□□ -0.86
VAPB-206ENST00000520497 MCM7P33993 719 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 ME1P48163 572 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 USP11P51784 963 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 MKRN3Q13064 507 aaKnown RBP9.69□□□□□ -0.86
VAPB-206ENST00000520497 PTGDRQ13258 359 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 LETM2Q2VYF4 491 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 ARL6IP4Q66PJ3 421 aaKnown RBP9.69□□□□□ -0.86
VAPB-206ENST00000520497 ADALQ6DHV7 355 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 PPP4R3AQ6IN85 833 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 CAVIN1Q6NZI2 390 aaKnown RBP9.69□□□□□ -0.86
VAPB-206ENST00000520497 MOXD1Q6UVY6 613 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 MCF2L2Q86YR7 1114 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 FAM43AQ8N2R8 423 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 CHST13Q8NET6 341 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 GTF3C2Q8WUA4 911 aaPredicted RBP9.69□□□□□ -0.86
VAPB-206ENST00000520497 MBOAT7Q96N66 472 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 PTPN18Q99952 460 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 MCOLN1Q9GZU1 580 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 SPATC1LQ9H0A9 340 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 GZF1Q9H116 711 aaPredicted RBP9.69□□□□□ -0.86
VAPB-206ENST00000520497 TXNRD2Q9NNW7 524 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 HOMER2Q9NSB8 354 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 RNF186Q9NXI6 227 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 COL20A1Q9P218 1284 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 RBPJLQ9UBG7 517 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 FBXO2Q9UK22 296 aaPredicted RBP9.69□□□□□ -0.86
VAPB-206ENST00000520497 RABGAP1Q9Y3P9 1069 aa9.69□□□□□ -0.86
VAPB-206ENST00000520497 SRPRBQ9Y5M8 271 aaKnown RBP9.69□□□□□ -0.86
VAPB-206ENST00000520497 ZSWIM8A7E2V4 1837 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 ADGRA2Q96PE1 1338 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 CYP3A7-CYP3A51PA0A087WV96 503 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 FAM237AA0A1B0GTK4 181 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 MANSC4A6NHS7 340 aaPredicted RBP9.68□□□□□ -0.86
VAPB-206ENST00000520497 LAD1O00515 517 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 SLC37A4O43826 429 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 CCNT1O60563 726 aaKnown RBP9.68□□□□□ -0.86
VAPB-206ENST00000520497 PEX10O60683 326 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 CUTAO60888 179 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 TRPA1O75762 1119 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 TDP2O95551 362 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 CYP2C8P10632 490 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 CYP3A7P24462 503 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 CIITAP33076 1130 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 PRPHP41219 470 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 RPS6P62753 249 aaKnown RBP9.68□□□□□ -0.86
VAPB-206ENST00000520497 ARHGAP4P98171 946 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 NOGQ13253 232 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 SLC30A10Q6XR72 485 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 CCDC73Q6ZRK6 1079 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 KRI1Q8N9T8 703 aaKnown RBP9.68□□□□□ -0.86
VAPB-206ENST00000520497 ZNF579Q8NAF0 562 aaKnown RBP9.68□□□□□ -0.86
VAPB-206ENST00000520497 SYTL5Q8TDW5 730 aaPredicted RBP9.68□□□□□ -0.86
VAPB-206ENST00000520497 FERMT2Q96AC1 680 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms