RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 KCNF1Q9H3M0 494 aa30.31■■■□□ 2.44
COL13A1-212ENST00000520133 IMPACTQ9P2X3 320 aa30.31■■■□□ 2.44
COL13A1-212ENST00000520133 CD44P16070 742 aaKnown RBP30.3■■■□□ 2.44
COL13A1-212ENST00000520133 KLHL10Q6JEL2 608 aa30.3■■■□□ 2.44
COL13A1-212ENST00000520133 TRPM4Q8TD43 1214 aa30.3■■■□□ 2.44
COL13A1-212ENST00000520133 KCNMB3Q9NPA1 279 aa30.3■■■□□ 2.44
COL13A1-212ENST00000520133 ABCB11O95342 1321 aa30.3■■■□□ 2.44
COL13A1-212ENST00000520133 SYNRGQ9UMZ2 1314 aa30.3■■■□□ 2.44
COL13A1-212ENST00000520133 CDK11BP21127 795 aaKnown RBP30.29■■■□□ 2.44
COL13A1-212ENST00000520133 SPATA1Q5VX52 437 aa30.29■■■□□ 2.44
COL13A1-212ENST00000520133 P2RX7Q99572 595 aaKnown RBP30.29■■■□□ 2.44
COL13A1-212ENST00000520133 FBXO28Q9NVF7 368 aa30.29■■■□□ 2.44
COL13A1-212ENST00000520133 PPP2R3BQ9Y5P8 575 aa30.29■■■□□ 2.44
COL13A1-212ENST00000520133 GCOM1H8Y6P7 765 aaPredicted RBP30.29■■■□□ 2.44
COL13A1-212ENST00000520133 TBX3O15119 743 aa30.29■■■□□ 2.44
COL13A1-212ENST00000520133 POLR2MP0CAP2 368 aa30.29■■■□□ 2.44
COL13A1-212ENST00000520133 TAL1P17542 331 aaPredicted RBP30.29■■■□□ 2.44
COL13A1-212ENST00000520133 HOXA13P31271 388 aaPredicted RBP30.29■■■□□ 2.44
COL13A1-212ENST00000520133 INPP5BP32019 993 aa30.29■■■□□ 2.44
COL13A1-212ENST00000520133 GRB10Q13322 594 aa30.29■■■□□ 2.44
COL13A1-212ENST00000520133 CCDC144BQ3MJ40 725 aa30.29■■■□□ 2.44
COL13A1-212ENST00000520133 Q4G0T1 1027 aa30.29■■■□□ 2.44
COL13A1-212ENST00000520133 SMYD4Q8IYR2 804 aaPredicted RBP30.29■■■□□ 2.44
COL13A1-212ENST00000520133 PRPF38AQ8NAV1 312 aaKnown RBP30.29■■■□□ 2.44
COL13A1-212ENST00000520133 LRRC15Q8TF66 581 aa30.29■■■□□ 2.44
COL13A1-212ENST00000520133 ZNF112Q9UJU3 913 aa30.29■■■□□ 2.44
COL13A1-212ENST00000520133 CFBP00751 764 aa30.28■■■□□ 2.44
COL13A1-212ENST00000520133 ZNF18P17022 549 aa30.28■■■□□ 2.44
COL13A1-212ENST00000520133 USP14P54578 494 aa30.28■■■□□ 2.44
COL13A1-212ENST00000520133 SAMD1Q6SPF0 538 aaPredicted RBP30.28■■■□□ 2.44
COL13A1-212ENST00000520133 SCYL3Q8IZE3 742 aa30.28■■■□□ 2.44
COL13A1-212ENST00000520133 C7orf25Q9BPX7 421 aa30.28■■■□□ 2.44
COL13A1-212ENST00000520133 SLF1Q9BQI6 1058 aa30.28■■■□□ 2.44
COL13A1-212ENST00000520133 CIITAP33076 1130 aa30.27■■■□□ 2.44
COL13A1-212ENST00000520133 GSDMDP57764 484 aa30.27■■■□□ 2.44
COL13A1-212ENST00000520133 SV2BQ7L1I2 683 aa30.27■■■□□ 2.44
COL13A1-212ENST00000520133 FILIP1Q7Z7B0 1213 aa30.27■■■□□ 2.44
COL13A1-212ENST00000520133 MED15Q96RN5 788 aa30.27■■■□□ 2.44
COL13A1-212ENST00000520133 GTPBP4Q9BZE4 634 aaKnown RBP30.27■■■□□ 2.44
COL13A1-212ENST00000520133 AS3MTQ9HBK9 375 aa30.27■■■□□ 2.44
COL13A1-212ENST00000520133 GGA3Q9NZ52 723 aa30.27■■■□□ 2.44
COL13A1-212ENST00000520133 SLC26A4O43511 780 aa30.26■■■□□ 2.44
COL13A1-212ENST00000520133 CYP3A4P08684 503 aa30.26■■■□□ 2.44
COL13A1-212ENST00000520133 DHX8Q14562 1220 aaKnown RBP30.26■■■□□ 2.44
COL13A1-212ENST00000520133 LDHDQ86WU2 507 aa30.26■■■□□ 2.44
COL13A1-212ENST00000520133 PNMA5Q96PV4 448 aa30.26■■■□□ 2.44
COL13A1-212ENST00000520133 TRIM9Q9C026 710 aa30.26■■■□□ 2.44
COL13A1-212ENST00000520133 EHMT1Q9H9B1 1298 aa30.26■■■□□ 2.44
COL13A1-212ENST00000520133 KDM3AQ9Y4C1 1321 aa30.26■■■□□ 2.43
COL13A1-212ENST00000520133 RHOBTB3O94955 611 aa30.26■■■□□ 2.43
COL13A1-212ENST00000520133 KMT5BQ4FZB7 885 aa30.26■■■□□ 2.43
COL13A1-212ENST00000520133 PRR16Q569H4 304 aa30.26■■■□□ 2.43
COL13A1-212ENST00000520133 FCHSD1Q86WN1 690 aa30.26■■■□□ 2.43
COL13A1-212ENST00000520133 LRRC27Q9C0I9 530 aa30.26■■■□□ 2.43
COL13A1-212ENST00000520133 KLRC4O43908 158 aa30.25■■■□□ 2.43
COL13A1-212ENST00000520133 ICAM1P05362 532 aa30.25■■■□□ 2.43
COL13A1-212ENST00000520133 EPS15P42566 896 aa30.25■■■□□ 2.43
COL13A1-212ENST00000520133 LARP4BQ92615 738 aaKnown RBP30.25■■■□□ 2.43
COL13A1-212ENST00000520133 WDR18Q9BV38 432 aa30.25■■■□□ 2.43
COL13A1-212ENST00000520133 NT5C3AQ9H0P0 336 aa30.25■■■□□ 2.43
COL13A1-212ENST00000520133 PICK1Q9NRD5 415 aa30.25■■■□□ 2.43
COL13A1-212ENST00000520133 RWDD2AQ9UIY3 292 aa30.25■■■□□ 2.43
COL13A1-212ENST00000520133 POLR2AP24928 1970 aaKnown RBP30.25■■■□□ 2.43
COL13A1-212ENST00000520133 ZNF76P36508 570 aa30.24■■■□□ 2.43
COL13A1-212ENST00000520133 STX17P56962 302 aa30.24■■■□□ 2.43
COL13A1-212ENST00000520133 PAK1Q13153 545 aa30.24■■■□□ 2.43
COL13A1-212ENST00000520133 WRNIP1Q96S55 665 aa30.24■■■□□ 2.43
COL13A1-212ENST00000520133 CTNND2Q9UQB3 1225 aa30.24■■■□□ 2.43
COL13A1-212ENST00000520133 STIM1Q13586 685 aa30.24■■■□□ 2.43
COL13A1-212ENST00000520133 TPD52L1Q16890 204 aaPredicted RBP30.24■■■□□ 2.43
COL13A1-212ENST00000520133 TMEM119Q4V9L6 283 aa30.24■■■□□ 2.43
COL13A1-212ENST00000520133 TMC6Q7Z403 805 aa30.24■■■□□ 2.43
COL13A1-212ENST00000520133 FAM20AQ96MK3 541 aa30.24■■■□□ 2.43
COL13A1-212ENST00000520133 SAMSN1Q9NSI8 373 aaKnown RBP30.24■■■□□ 2.43
COL13A1-212ENST00000520133 BLOC1S4Q9NUP1 217 aa30.24■■■□□ 2.43
COL13A1-212ENST00000520133 ASIC1P78348 528 aa30.23■■■□□ 2.43
COL13A1-212ENST00000520133 MTMR2Q13614 643 aa30.23■■■□□ 2.43
COL13A1-212ENST00000520133 LRRC8AQ8IWT6 810 aa30.23■■■□□ 2.43
COL13A1-212ENST00000520133 ETNPPLQ8TBG4 499 aa30.23■■■□□ 2.43
COL13A1-212ENST00000520133 RAD54LQ92698 747 aa30.23■■■□□ 2.43
COL13A1-212ENST00000520133 TANGO6Q9C0B7 1094 aa30.23■■■□□ 2.43
COL13A1-212ENST00000520133 CCPG1Q9ULG6 757 aa30.23■■■□□ 2.43
COL13A1-212ENST00000520133 CACTINQ8WUQ7 758 aaKnown RBP30.22■■■□□ 2.43
COL13A1-212ENST00000520133 GJA10Q969M2 543 aa30.22■■■□□ 2.43
COL13A1-212ENST00000520133 EXOC1Q9NV70 894 aa30.22■■■□□ 2.43
COL13A1-212ENST00000520133 GDAQ9Y2T3 454 aa30.22■■■□□ 2.43
COL13A1-212ENST00000520133 FAM86B1E9PN63 330 aa30.22■■■□□ 2.43
COL13A1-212ENST00000520133 FAM86B2P0C5J1 330 aa30.22■■■□□ 2.43
COL13A1-212ENST00000520133 SPP2Q13103 211 aa30.22■■■□□ 2.43
COL13A1-212ENST00000520133 SUPT20HL1Q3ZLR7 823 aa30.22■■■□□ 2.43
COL13A1-212ENST00000520133 HSP90AA4PQ58FG1 418 aa30.22■■■□□ 2.43
COL13A1-212ENST00000520133 HYIQ5T013 277 aa30.22■■■□□ 2.43
COL13A1-212ENST00000520133 GIMAP8Q8ND71 665 aaPredicted RBP30.22■■■□□ 2.43
COL13A1-212ENST00000520133 KIAA1524Q8TCG1 905 aa30.22■■■□□ 2.43
COL13A1-212ENST00000520133 NUDT12Q9BQG2 462 aa30.22■■■□□ 2.43
COL13A1-212ENST00000520133 STK24Q9Y6E0 443 aa30.22■■■□□ 2.43
COL13A1-212ENST00000520133 VCAM1P19320 739 aa30.21■■■□□ 2.43
COL13A1-212ENST00000520133 CCT6AP40227 531 aaKnown RBP30.21■■■□□ 2.43
COL13A1-212ENST00000520133 PRCPP42785 496 aa30.21■■■□□ 2.43
COL13A1-212ENST00000520133 HIRAP54198 1017 aaPredicted RBP30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms