RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 FAN1Q9Y2M0 1017 aa7.21□□□□□ -1.26
HMGB1P46-201ENST00000520062 TMEM265A0A087WTH1 108 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 FAM47E-STBD1D6RA91 191 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 KATNA1O75449 491 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 IGLV1-40P01703 118 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 SOD2P04179 222 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 LCP1P13796 627 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 LTKP29376 864 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 OCRLQ01968 901 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 MTMR1Q13613 665 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 TTF1Q15361 905 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 TMEM177Q53S58 311 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 LHFPL2Q6ZUX7 228 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 FMNL3Q8IVF7 1028 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 SMC1BQ8NDV3 1235 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 SHKBP1Q8TBC3 707 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 NETO1Q8TDF5 533 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 PCGF6Q9BYE7 350 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 B4GALT6Q9UBX8 382 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 ZKSCAN5Q9Y2L8 839 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 ZNF281Q9Y2X9 895 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 PCDHA11Q9Y5I1 949 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 PITPNM2Q9BZ72 1349 aa7.2□□□□□ -1.26
HMGB1P46-201ENST00000520062 TMEM82A0PJX8 343 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 WASH4PA8MWX3 477 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 WDR64B1ANS9 1081 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 M0R2C6 588 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 TRAF5O00463 557 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 GAS7O60861 476 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 H2AFB1P0C5Y9 115 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 H2AFB2P0C5Z0 115 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 GRK2P25098 689 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 GRK3P35626 688 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 LSSP48449 732 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 MECP2P51608 486 aaKnown RBP7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 TEKQ02763 1124 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 INF2Q27J81 1249 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 C16orf59Q7L2K0 433 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 NAT16Q8N8M0 369 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 CHST14Q8NCH0 376 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 FBXW5Q969U6 566 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 RELTQ969Z4 430 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 FCRL2Q96LA5 508 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 COQ6Q9Y2Z9 468 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 SPEF1Q9Y4P9 236 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 PCDHA2Q9Y5H9 948 aa7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 TIMM13Q9Y5L4 95 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P46-201ENST00000520062 ZNF891A8MT65 544 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 FKTNO75072 461 aa7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 ADCYAP1R1P41586 468 aa7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 NEK2P51955 445 aa7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 RPL11P62913 178 aaKnown RBP7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 TMPRSS15P98073 1019 aa7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 FAPQ12884 760 aa7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 LSAMPQ13449 338 aa7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 NFE2Q16621 373 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 ARHGAP44Q17R89 818 aa7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 MBLAC2Q68D91 279 aa7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 OVCH1Q7RTY7 1134 aa7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 LRRC4CQ9HCJ2 640 aa7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 CRTAC1Q9NQ79 661 aa7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 TPSG1Q9NRR2 321 aa7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 GEMIN8Q9NWZ8 242 aaKnown RBP7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 ERVK13-1Q9NX77 482 aa7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 ADGRE2Q9UHX3 823 aa7.18□□□□□ -1.26
HMGB1P46-201ENST00000520062 CCDC66A2RUB6 948 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 C7orf72A4D263 438 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 K7ESF4 209 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 CYP26A1O43174 497 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 NPHS1O60500 1241 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 FKBP9O95302 570 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 ESR1P03372 595 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 SRGAP2CP0DJJ0 459 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 PYGMP11217 842 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 FSTP19883 344 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 IL2P60568 153 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 ST5P78524 1137 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 EGR3Q06889 387 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 MCL1Q07820 350 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 ITKQ08881 620 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 LAPTM5Q13571 262 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 SKOR2Q2VWA4 1001 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 FKBP9P1Q75LS8 142 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 CREG2Q8IUH2 290 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 Q8N1Y9 231 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 PLD6Q8N2A8 252 aaKnown RBP7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 MTMR8Q96EF0 704 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 SCYL1Q96KG9 808 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 MENTQ9BUN1 341 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 CDIP1Q9H305 208 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 IPPKQ9H8X2 491 aa7.17□□□□□ -1.26
HMGB1P46-201ENST00000520062 H7BY64 318 aa7.16□□□□□ -1.26
HMGB1P46-201ENST00000520062 ULK1O75385 1050 aa7.16□□□□□ -1.26
HMGB1P46-201ENST00000520062 LACTBP83111 547 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P46-201ENST00000520062 SYDE2Q5VT97 1194 aa7.16□□□□□ -1.26
HMGB1P46-201ENST00000520062 HLA-DQA1Q5Y7H0 255 aa7.16□□□□□ -1.26
HMGB1P46-201ENST00000520062 OTOP1Q7RTM1 612 aa7.16□□□□□ -1.26
HMGB1P46-201ENST00000520062 C11orf74Q86VG3 221 aa7.16□□□□□ -1.26
HMGB1P46-201ENST00000520062 CPNE8Q86YQ8 564 aa7.16□□□□□ -1.26
HMGB1P46-201ENST00000520062 NXPE1Q8N323 547 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms