RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 MYH6P13533 1939 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 PPP1R11O60927 126 aaPredicted RBP10.21□□□□□ -0.77
PABPC1-213ENST00000519848 ARIH2O95376 493 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 CD4P01730 458 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 ICAM1P05362 532 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 COPB2P35606 906 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 ZNF543Q08ER8 600 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 BAATQ14032 418 aaPredicted RBP10.21□□□□□ -0.77
PABPC1-213ENST00000519848 SYDE2Q5VT97 1194 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 NSMFQ6X4W1 530 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 FAM160B2Q86V87 743 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 USP38Q8NB14 1042 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 SLC43A3Q8NBI5 491 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 UBA5Q9GZZ9 404 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 WNT8AQ9H1J5 351 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 STARD7Q9NQZ5 370 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 SLC5A4Q9NY91 659 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 FAM184BQ9ULE4 1060 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 CCPG1Q9ULG6 757 aa10.21□□□□□ -0.77
PABPC1-213ENST00000519848 KIAA1217Q5T5P2 1943 aa10.21□□□□□ -0.78
PABPC1-213ENST00000519848 TRIM6-TRIM34B2RNG4 842 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 B4E1Z4 1266 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 ACRP10323 421 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 ALDH5A1P51649 535 aaPredicted RBP10.2□□□□□ -0.78
PABPC1-213ENST00000519848 PTH1RQ03431 593 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 IKQ13123 557 aaPredicted RBP10.2□□□□□ -0.78
PABPC1-213ENST00000519848 PPP1R15BQ5SWA1 713 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 AKNAD1Q5T1N1 836 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 CWC27Q6UX04 472 aaKnown RBP10.2□□□□□ -0.78
PABPC1-213ENST00000519848 STOX1Q6ZVD7 989 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 CYB5R4Q7L1T6 521 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 RNF180Q86T96 592 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 TLK2Q86UE8 772 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 MSL3Q8N5Y2 521 aaKnown RBP10.2□□□□□ -0.78
PABPC1-213ENST00000519848 DCAF4Q8WV16 495 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 MYLIPQ8WY64 445 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 CTAGE1Q96RT6 745 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.2□□□□□ -0.78
PABPC1-213ENST00000519848 PPP1R12CQ9BZL4 782 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 PRKD2Q9BZL6 878 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 ABHD16BQ9H3Z7 469 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 DOCK5Q9H7D0 1870 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 TCP11L1Q9NUJ3 509 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 CXXC1Q9P0U4 656 aaPredicted RBP10.2□□□□□ -0.78
PABPC1-213ENST00000519848 STXBP5LQ9Y2K9 1186 aa10.2□□□□□ -0.78
PABPC1-213ENST00000519848 COL4A4P53420 1690 aaPredicted RBP10.19□□□□□ -0.78
PABPC1-213ENST00000519848 B4GALT4O60513 344 aa10.19□□□□□ -0.78
PABPC1-213ENST00000519848 KDM4AO75164 1064 aa10.19□□□□□ -0.78
PABPC1-213ENST00000519848 ARHGEF15O94989 841 aa10.19□□□□□ -0.78
PABPC1-213ENST00000519848 TOP1P11387 765 aaKnown RBP10.19□□□□□ -0.78
PABPC1-213ENST00000519848 CSF2RAP15509 400 aa10.19□□□□□ -0.78
PABPC1-213ENST00000519848 EDNRBP24530 442 aa10.19□□□□□ -0.78
PABPC1-213ENST00000519848 CYP2C18P33260 490 aa10.19□□□□□ -0.78
PABPC1-213ENST00000519848 RASIP1Q5U651 963 aa10.19□□□□□ -0.78
PABPC1-213ENST00000519848 STAG2Q8N3U4 1231 aa10.19□□□□□ -0.78
PABPC1-213ENST00000519848 ENAHQ8N8S7 591 aaPredicted RBP10.19□□□□□ -0.78
PABPC1-213ENST00000519848 CDX2Q99626 313 aaPredicted RBP10.19□□□□□ -0.78
PABPC1-213ENST00000519848 LBHD1Q9BQE6 289 aaPredicted RBP10.19□□□□□ -0.78
PABPC1-213ENST00000519848 TSEN34Q9BSV6 310 aaKnown RBP10.19□□□□□ -0.78
PABPC1-213ENST00000519848 TRPV6Q9H1D0 765 aa10.19□□□□□ -0.78
PABPC1-213ENST00000519848 TOMM22Q9NS69 142 aa10.19□□□□□ -0.78
PABPC1-213ENST00000519848 SUPT16HQ9Y5B9 1047 aaKnown RBP10.19□□□□□ -0.78
PABPC1-213ENST00000519848 TET1Q8NFU7 2136 aa10.18□□□□□ -0.78
PABPC1-213ENST00000519848 MOXD2PA6NHM9 499 aa10.18□□□□□ -0.78
PABPC1-213ENST00000519848 ARVCFO00192 962 aa10.18□□□□□ -0.78
PABPC1-213ENST00000519848 RPS6P62753 249 aaKnown RBP10.18□□□□□ -0.78
PABPC1-213ENST00000519848 TNFAIP2Q03169 654 aa10.18□□□□□ -0.78
PABPC1-213ENST00000519848 SEC23AQ15436 765 aa10.18□□□□□ -0.78
PABPC1-213ENST00000519848 TCTN1Q2MV58 587 aa10.18□□□□□ -0.78
PABPC1-213ENST00000519848 GNASQ5JWF2 1037 aa10.18□□□□□ -0.78
PABPC1-213ENST00000519848 TMEM240Q5SV17 173 aa10.18□□□□□ -0.78
PABPC1-213ENST00000519848 SPRED2Q7Z698 418 aa10.18□□□□□ -0.78
PABPC1-213ENST00000519848 CHURC1Q8WUH1 139 aa10.18□□□□□ -0.78
PABPC1-213ENST00000519848 ZNF287Q9HBT7 754 aa10.18□□□□□ -0.78
PABPC1-213ENST00000519848 PRDM6Q9NQX0 595 aa10.18□□□□□ -0.78
PABPC1-213ENST00000519848 TMEM39AQ9NV64 488 aa10.18□□□□□ -0.78
PABPC1-213ENST00000519848 KIAA1468Q9P260 1216 aa10.18□□□□□ -0.78
PABPC1-213ENST00000519848 FBXO40Q9UH90 709 aa10.18□□□□□ -0.78
PABPC1-213ENST00000519848 TNKSO95271 1327 aa10.17□□□□□ -0.78
PABPC1-213ENST00000519848 DYNC1LI2O43237 492 aaPredicted RBP10.17□□□□□ -0.78
PABPC1-213ENST00000519848 SLC3A2P08195 630 aaKnown RBP10.17□□□□□ -0.78
PABPC1-213ENST00000519848 CALML3P27482 149 aa10.17□□□□□ -0.78
PABPC1-213ENST00000519848 ANTXR2P58335 489 aa10.17□□□□□ -0.78
PABPC1-213ENST00000519848 FPGSQ05932 587 aa10.17□□□□□ -0.78
PABPC1-213ENST00000519848 GRIN2CQ14957 1233 aa10.17□□□□□ -0.78
PABPC1-213ENST00000519848 LRRFIP1Q32MZ4 808 aaKnown RBP10.17□□□□□ -0.78
PABPC1-213ENST00000519848 TKFCQ3LXA3 575 aa10.17□□□□□ -0.78
PABPC1-213ENST00000519848 USH1GQ495M9 461 aa10.17□□□□□ -0.78
PABPC1-213ENST00000519848 TTC22Q5TAA0 569 aa10.17□□□□□ -0.78
PABPC1-213ENST00000519848 IL31RAQ8NI17 732 aa10.17□□□□□ -0.78
PABPC1-213ENST00000519848 RNPC3Q96LT9 517 aaKnown RBP10.17□□□□□ -0.78
PABPC1-213ENST00000519848 TOX2Q96NM4 488 aa10.17□□□□□ -0.78
PABPC1-213ENST00000519848 SEMA6BQ9H3T3 888 aa10.17□□□□□ -0.78
PABPC1-213ENST00000519848 TRMT13Q9NUP7 481 aaKnown RBP10.17□□□□□ -0.78
PABPC1-213ENST00000519848 ZSWIM5Q9P217 1185 aa10.17□□□□□ -0.78
PABPC1-213ENST00000519848 TELO2Q9Y4R8 837 aa10.17□□□□□ -0.78
PABPC1-213ENST00000519848 PCDHGA10Q9Y5H3 936 aa10.17□□□□□ -0.78
PABPC1-213ENST00000519848 SIP14410 1827 aa10.17□□□□□ -0.78
PABPC1-213ENST00000519848 VCANP13611 3396 aa10.16□□□□□ -0.78
PABPC1-213ENST00000519848 SPTBN5Q9NRC6 3674 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms