RNA–Protein interactions for RNA: ENST00000519802.5

PCM1-213, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-213ENST00000519802 NOP9Q86U38 636 aaKnown RBP6.93□□□□□ -1.3
PCM1-213ENST00000519802 BRF1Q92994 677 aa6.93□□□□□ -1.3
PCM1-213ENST00000519802 ITGA4P13612 1032 aa6.92□□□□□ -1.3
PCM1-213ENST00000519802 SSRP1Q08945 709 aaKnown RBP6.92□□□□□ -1.3
PCM1-213ENST00000519802 PPP2R5DQ14738 602 aa6.92□□□□□ -1.3
PCM1-213ENST00000519802 SLC10A6Q3KNW5 377 aa6.92□□□□□ -1.3
PCM1-213ENST00000519802 VWA3BQ502W6 1294 aa6.92□□□□□ -1.3
PCM1-213ENST00000519802 RTP2Q5QGT7 225 aa6.92□□□□□ -1.3
PCM1-213ENST00000519802 SPATC1Q76KD6 591 aa6.92□□□□□ -1.3
PCM1-213ENST00000519802 APBA2Q99767 749 aa6.92□□□□□ -1.3
PCM1-213ENST00000519802 DSCC1Q9BVC3 393 aa6.92□□□□□ -1.3
PCM1-213ENST00000519802 LGR4Q9BXB1 951 aa6.92□□□□□ -1.3
PCM1-213ENST00000519802 KLHL25Q9H0H3 589 aa6.92□□□□□ -1.3
PCM1-213ENST00000519802 GP6Q9HCN6 339 aa6.92□□□□□ -1.3
PCM1-213ENST00000519802 PRR13Q9NZ81 148 aa6.92□□□□□ -1.3
PCM1-213ENST00000519802 APEX2Q9UBZ4 518 aa6.92□□□□□ -1.3
PCM1-213ENST00000519802 TMA7Q9Y2S6 64 aaKnown RBP6.92□□□□□ -1.3
PCM1-213ENST00000519802 AGRPO00253 132 aa6.91□□□□□ -1.3
PCM1-213ENST00000519802 SHOXO15266 292 aa6.91□□□□□ -1.3
PCM1-213ENST00000519802 PPM1BO75688 479 aa6.91□□□□□ -1.3
PCM1-213ENST00000519802 MSL3P1P0C860 447 aa6.91□□□□□ -1.3
PCM1-213ENST00000519802 CD247P20963 164 aa6.91□□□□□ -1.3
PCM1-213ENST00000519802 FBLN1P23142 703 aa6.91□□□□□ -1.3
PCM1-213ENST00000519802 TARBP2Q15633 366 aaKnown RBP6.91□□□□□ -1.3
PCM1-213ENST00000519802 HHIPL2Q6UWX4 724 aa6.91□□□□□ -1.3
PCM1-213ENST00000519802 JAZF1Q86VZ6 243 aa6.91□□□□□ -1.3
PCM1-213ENST00000519802 NOL6Q9H6R4 1146 aaKnown RBP6.91□□□□□ -1.3
PCM1-213ENST00000519802 WHRNQ9P202 907 aa6.91□□□□□ -1.3
PCM1-213ENST00000519802 CNOT11Q9UKZ1 510 aaKnown RBP6.91□□□□□ -1.3
PCM1-213ENST00000519802 KDM2BQ8NHM5 1336 aa6.91□□□□□ -1.3
PCM1-213ENST00000519802 DIAPH1O60610 1272 aaKnown RBP6.9□□□□□ -1.3
PCM1-213ENST00000519802 PLA2G1BP04054 148 aaKnown RBP6.9□□□□□ -1.3
PCM1-213ENST00000519802 INSRRP14616 1297 aa6.9□□□□□ -1.3
PCM1-213ENST00000519802 LIPIQ6XZB0 460 aa6.9□□□□□ -1.3
PCM1-213ENST00000519802 LRP10Q7Z4F1 713 aa6.9□□□□□ -1.3
PCM1-213ENST00000519802 ST13P5Q8NFI4 369 aaPredicted RBP6.9□□□□□ -1.3
PCM1-213ENST00000519802 FNIP1Q8TF40 1166 aa6.9□□□□□ -1.3
PCM1-213ENST00000519802 ZDHHC15Q96MV8 337 aa6.9□□□□□ -1.3
PCM1-213ENST00000519802 SUSD2Q9UGT4 822 aa6.9□□□□□ -1.3
PCM1-213ENST00000519802 MRPL42Q9Y6G3 142 aaKnown RBP6.9□□□□□ -1.3
PCM1-213ENST00000519802 SRGAP3O43295 1099 aa6.89□□□□□ -1.31
PCM1-213ENST00000519802 CYBBP04839 570 aa6.89□□□□□ -1.31
PCM1-213ENST00000519802 GSNP06396 782 aa6.89□□□□□ -1.31
PCM1-213ENST00000519802 DBHP09172 617 aa6.89□□□□□ -1.31
PCM1-213ENST00000519802 ZNF445P59923 1031 aa6.89□□□□□ -1.31
PCM1-213ENST00000519802 PAQR3Q6TCH7 311 aa6.89□□□□□ -1.31
PCM1-213ENST00000519802 ADGRG2Q8IZP9 1017 aa6.89□□□□□ -1.31
PCM1-213ENST00000519802 FIBCD1Q8N539 461 aa6.89□□□□□ -1.31
PCM1-213ENST00000519802 SLC12A9Q9BXP2 914 aa6.89□□□□□ -1.31
PCM1-213ENST00000519802 HCFC2Q9Y5Z7 792 aa6.89□□□□□ -1.31
PCM1-213ENST00000519802 SHROOM4Q9ULL8 1493 aa6.89□□□□□ -1.31
PCM1-213ENST00000519802 A0A1B0GTL3 188 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 A0A1W2PQ27 194 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 A0A1W2PQ64 194 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 A0A1W2PQC6 194 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 A0A1W2PQD8 194 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 K7ESM1 405 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 NOP56O00567 594 aaKnown RBP6.88□□□□□ -1.31
PCM1-213ENST00000519802 GSTM1P09488 218 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 ATF2P15336 505 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 ZNF143P52747 638 aaPredicted RBP6.88□□□□□ -1.31
PCM1-213ENST00000519802 FOXO4P98177 505 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 PUM1Q14671 1186 aaKnown RBP eCLIP6.88□□□□□ -1.311e-11■■■□□ 14.9
PCM1-213ENST00000519802 ANKRD39Q53RE8 183 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 UBXN11Q5T124 520 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 HLA-DQA1Q5Y7H0 255 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 LILRB2Q8N423 598 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 NAT16Q8N8M0 369 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 EPN3Q9H201 632 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 PLA2G2DQ9UNK4 145 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 AKT3Q9Y243 479 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 MYRFQ9Y2G1 1151 aa6.88□□□□□ -1.31
PCM1-213ENST00000519802 IQCA1LA6NCM1 817 aa6.87□□□□□ -1.31
PCM1-213ENST00000519802 KCNH1O95259 989 aa6.87□□□□□ -1.31
PCM1-213ENST00000519802 ITGAVP06756 1048 aa6.87□□□□□ -1.31
PCM1-213ENST00000519802 HTRA3P83110 453 aa6.87□□□□□ -1.31
PCM1-213ENST00000519802 NT5DC1Q5TFE4 455 aa6.87□□□□□ -1.31
PCM1-213ENST00000519802 SAPCD2Q86UD0 394 aa6.87□□□□□ -1.31
PCM1-213ENST00000519802 ZNF227Q86WZ6 799 aa6.87□□□□□ -1.31
PCM1-213ENST00000519802 JAMLQ86YT9 394 aa6.87□□□□□ -1.31
PCM1-213ENST00000519802 BVESQ8NE79 360 aa6.87□□□□□ -1.31
PCM1-213ENST00000519802 SH3TC2Q8TF17 1288 aa6.87□□□□□ -1.31
PCM1-213ENST00000519802 GPR20Q99678 358 aa6.87□□□□□ -1.31
PCM1-213ENST00000519802 SPATA25Q9BR10 227 aa6.87□□□□□ -1.31
PCM1-213ENST00000519802 USP40Q9NVE5 1235 aa6.87□□□□□ -1.31
PCM1-213ENST00000519802 CGGBP1Q9UFW8 167 aaPredicted RBP6.87□□□□□ -1.31
PCM1-213ENST00000519802 FHOD1Q9Y613 1164 aa6.87□□□□□ -1.31
PCM1-213ENST00000519802 TLDC2A0PJX2 215 aa6.86□□□□□ -1.31
PCM1-213ENST00000519802 SH3D21A4FU49 640 aa6.86□□□□□ -1.31
PCM1-213ENST00000519802 H0Y8X5 98 aa6.86□□□□□ -1.31
PCM1-213ENST00000519802 TBX1O43435 398 aa6.86□□□□□ -1.31
PCM1-213ENST00000519802 DPY19L1Q2PZI1 675 aa6.86□□□□□ -1.31
PCM1-213ENST00000519802 CWF19L1Q69YN2 538 aaKnown RBP6.86□□□□□ -1.31
PCM1-213ENST00000519802 BICRALQ6AI39 1079 aa6.86□□□□□ -1.31
PCM1-213ENST00000519802 FERMT3Q86UX7 667 aa6.86□□□□□ -1.31
PCM1-213ENST00000519802 LRRC47Q8N1G4 583 aaKnown RBP6.86□□□□□ -1.31
PCM1-213ENST00000519802 CRACR2BQ8N4Y2 399 aaPredicted RBP6.86□□□□□ -1.31
PCM1-213ENST00000519802 SPATA9Q9BWV2 254 aa6.86□□□□□ -1.31
PCM1-213ENST00000519802 RNF38Q9H0F5 515 aa6.86□□□□□ -1.31
PCM1-213ENST00000519802 KANSL2Q9H9L4 492 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms