RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 GTF3C6Q969F1 213 aa13.64□□□□□ -0.23
HPS4-218ENST00000519774 MPHOSPH6Q99547 160 aaKnown RBP13.64□□□□□ -0.23
HPS4-218ENST00000519774 MAF1Q9H063 256 aa13.64□□□□□ -0.23
HPS4-218ENST00000519774 B4DLN1 442 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 ST18O60284 1047 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 CDKL5O76039 1030 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 MRPL12P52815 198 aaKnown RBP13.63□□□□□ -0.23
HPS4-218ENST00000519774 GHRHRQ02643 423 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 ACVR2BQ13705 512 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 PKN1Q16512 942 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 UBE2SQ16763 222 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 PPP1R18Q6NYC8 613 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 DNERQ8NFT8 737 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 NSUN6Q8TEA1 469 aaKnown RBP13.63□□□□□ -0.23
HPS4-218ENST00000519774 SHISA4Q96DD7 197 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 RMDN3Q96TC7 470 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 ABHD16BQ9H3Z7 469 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 PSTPIP2Q9H939 334 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 BARHL2Q9NY43 387 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 MAP3K20Q9NYL2 800 aaKnown RBP13.63□□□□□ -0.23
HPS4-218ENST00000519774 DDX20Q9UHI6 824 aaKnown RBP13.63□□□□□ -0.23
HPS4-218ENST00000519774 NRBP1Q9UHY1 535 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 LIMCH1Q9UPQ0 1083 aa13.63□□□□□ -0.23
HPS4-218ENST00000519774 SEPT4O43236 478 aa13.62□□□□□ -0.23
HPS4-218ENST00000519774 SGPL1O95470 568 aa13.62□□□□□ -0.23
HPS4-218ENST00000519774 TFRCP02786 760 aaKnown RBP13.62□□□□□ -0.23
HPS4-218ENST00000519774 ZNF865P0CJ78 1059 aaPredicted RBP13.62□□□□□ -0.23
HPS4-218ENST00000519774 EN2P19622 333 aaPredicted RBP13.62□□□□□ -0.23
HPS4-218ENST00000519774 GJA8P48165 433 aa13.62□□□□□ -0.23
HPS4-218ENST00000519774 ADCY7P51828 1080 aa13.62□□□□□ -0.23
HPS4-218ENST00000519774 SAMD3Q8N6K7 520 aa13.62□□□□□ -0.23
HPS4-218ENST00000519774 LENG1Q96BZ8 264 aaPredicted RBP13.62□□□□□ -0.23
HPS4-218ENST00000519774 PXMP2Q9NR77 195 aa13.62□□□□□ -0.23
HPS4-218ENST00000519774 LOC102724159A0A0B4J2E5 919 aa13.61□□□□□ -0.23
HPS4-218ENST00000519774 SMCO2A6NFE2 343 aa13.61□□□□□ -0.23
HPS4-218ENST00000519774 MEIS2O14770 477 aa13.61□□□□□ -0.23
HPS4-218ENST00000519774 MSCO60682 206 aa13.61□□□□□ -0.23
HPS4-218ENST00000519774 DEXIO95424 95 aa13.61□□□□□ -0.23
HPS4-218ENST00000519774 MYCLP12524 364 aaPredicted RBP13.61□□□□□ -0.23
HPS4-218ENST00000519774 AKR1A1P14550 325 aa13.61□□□□□ -0.23
HPS4-218ENST00000519774 EDNRBP24530 442 aa13.61□□□□□ -0.23
HPS4-218ENST00000519774 PWP2Q15269 919 aaKnown RBP13.61□□□□□ -0.23
HPS4-218ENST00000519774 CCDC83Q8IWF9 413 aa13.61□□□□□ -0.23
HPS4-218ENST00000519774 MORC4Q8TE76 937 aa13.61□□□□□ -0.23
HPS4-218ENST00000519774 CCDC12Q8WUD4 166 aaPredicted RBP13.61□□□□□ -0.23
HPS4-218ENST00000519774 KATNBL1Q9H079 304 aa13.61□□□□□ -0.23
HPS4-218ENST00000519774 VTA1Q9NP79 307 aa13.61□□□□□ -0.23
HPS4-218ENST00000519774 VPS54Q9P1Q0 977 aa13.61□□□□□ -0.23
HPS4-218ENST00000519774 FAM184BQ9ULE4 1060 aa13.61□□□□□ -0.23
HPS4-218ENST00000519774 SPDYE3A6NKU9 549 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 PIK3CDO00329 1044 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 CD2BP2O95400 341 aaKnown RBP13.6□□□□□ -0.23
HPS4-218ENST00000519774 CTDNEP1O95476 244 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 RARBP10826 455 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 ADCYAP1R1P41586 468 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 ST3GAL1Q11201 340 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 PGM5Q15124 567 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 CCDC144BQ3MJ40 725 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 LHX8Q68G74 356 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 CCDC148Q8NFR7 591 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 IL31RAQ8NI17 732 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 ZFP91Q96JP5 570 aaPredicted RBP13.6□□□□□ -0.23
HPS4-218ENST00000519774 ZSCAN31Q96LW9 406 aaPredicted RBP13.6□□□□□ -0.23
HPS4-218ENST00000519774 AIFM3Q96NN9 605 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 PDCD2LQ9BRP1 358 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 RIC8AQ9NPQ8 531 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 PDGFCQ9NRA1 345 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 STK36Q9NRP7 1315 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 CENPFP49454 3210 aa13.6□□□□□ -0.23
HPS4-218ENST00000519774 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.59□□□□□ -0.23
HPS4-218ENST00000519774 ADCY6O43306 1168 aa13.59□□□□□ -0.23
HPS4-218ENST00000519774 JAK2O60674 1132 aa13.59□□□□□ -0.23
HPS4-218ENST00000519774 NR3C2P08235 984 aa13.59□□□□□ -0.23
HPS4-218ENST00000519774 STXBP2Q15833 593 aa13.59□□□□□ -0.23
HPS4-218ENST00000519774 TAPT1Q6NXT6 567 aa13.59□□□□□ -0.23
HPS4-218ENST00000519774 NSUN7Q8NE18 718 aaKnown RBP13.59□□□□□ -0.23
HPS4-218ENST00000519774 PGBD1Q96JS3 809 aa13.59□□□□□ -0.23
HPS4-218ENST00000519774 IWS1Q96ST2 819 aa13.59□□□□□ -0.23
HPS4-218ENST00000519774 CRISPLD2Q9H0B8 497 aa13.59□□□□□ -0.23
HPS4-218ENST00000519774 C6orf50Q9HD87 102 aa13.59□□□□□ -0.23
HPS4-218ENST00000519774 XPNPEP3Q9NQH7 507 aa13.59□□□□□ -0.23
HPS4-218ENST00000519774 SH2B1Q9NRF2 756 aaPredicted RBP13.59□□□□□ -0.23
HPS4-218ENST00000519774 TMEM260Q9NX78 707 aa13.59□□□□□ -0.23
HPS4-218ENST00000519774 ORC3Q9UBD5 711 aaPredicted RBP13.59□□□□□ -0.23
HPS4-218ENST00000519774 OGDHLQ9ULD0 1010 aa13.59□□□□□ -0.23
HPS4-218ENST00000519774 KIAA1217Q5T5P2 1943 aa13.58□□□□□ -0.23
HPS4-218ENST00000519774 ESYT2A0FGR8 921 aa13.58□□□□□ -0.24
HPS4-218ENST00000519774 FARP2O94887 1054 aaPredicted RBP13.58□□□□□ -0.24
HPS4-218ENST00000519774 CCND2P30279 289 aa13.58□□□□□ -0.24
HPS4-218ENST00000519774 FOSBP53539 338 aa13.58□□□□□ -0.24
HPS4-218ENST00000519774 NLRP5P59047 1200 aa13.58□□□□□ -0.24
HPS4-218ENST00000519774 TNFAIP2Q03169 654 aa13.58□□□□□ -0.24
HPS4-218ENST00000519774 IFFO2Q5TF58 517 aa13.58□□□□□ -0.24
HPS4-218ENST00000519774 JAKMIP3Q5VZ66 844 aa13.58□□□□□ -0.24
HPS4-218ENST00000519774 SEPT14Q6ZU15 432 aa13.58□□□□□ -0.24
HPS4-218ENST00000519774 ANO3Q9BYT9 981 aa13.58□□□□□ -0.24
HPS4-218ENST00000519774 ZMYND12Q9H0C1 365 aa13.58□□□□□ -0.24
HPS4-218ENST00000519774 GLT8D2Q9H1C3 349 aa13.58□□□□□ -0.24
HPS4-218ENST00000519774 EHMT1Q9H9B1 1298 aa13.58□□□□□ -0.24
HPS4-218ENST00000519774 PCDHA6Q9UN73 950 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms