RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 SCN10AQ9Y5Y9 1956 aa14.53□□□□□ -0.08
CSMD1-205ENST00000519623 GRXCR1A8MXD5 290 aa14.52□□□□□ -0.09
CSMD1-205ENST00000519623 ARIH2O95376 493 aa14.52□□□□□ -0.09
CSMD1-205ENST00000519623 MYL3P08590 195 aa14.52□□□□□ -0.09
CSMD1-205ENST00000519623 CYP21A2P08686 494 aa14.52□□□□□ -0.09
CSMD1-205ENST00000519623 DNAJB2P25686 324 aa14.52□□□□□ -0.09
CSMD1-205ENST00000519623 PPP2R5BQ15173 497 aa14.52□□□□□ -0.09
CSMD1-205ENST00000519623 IFIT1BQ5T764 474 aaKnown RBP14.52□□□□□ -0.09
CSMD1-205ENST00000519623 PSRC1Q6PGN9 363 aaPredicted RBP14.52□□□□□ -0.09
CSMD1-205ENST00000519623 FBXO11Q86XK2 927 aa14.52□□□□□ -0.09
CSMD1-205ENST00000519623 MCF2L2Q86YR7 1114 aa14.52□□□□□ -0.09
CSMD1-205ENST00000519623 HERVK_113Q902F9 699 aa14.52□□□□□ -0.09
CSMD1-205ENST00000519623 MTMR8Q96EF0 704 aa14.52□□□□□ -0.09
CSMD1-205ENST00000519623 MTG1Q9BT17 334 aaPredicted RBP14.52□□□□□ -0.09
CSMD1-205ENST00000519623 WNT8AQ9H1J5 351 aa14.52□□□□□ -0.09
CSMD1-205ENST00000519623 TRMT13Q9NUP7 481 aaKnown RBP14.52□□□□□ -0.09
CSMD1-205ENST00000519623 CXXC1Q9P0U4 656 aaPredicted RBP14.52□□□□□ -0.09
CSMD1-205ENST00000519623 MAD2L2Q9UI95 211 aa14.52□□□□□ -0.09
CSMD1-205ENST00000519623 MRPL11Q9Y3B7 192 aaKnown RBP14.52□□□□□ -0.09
CSMD1-205ENST00000519623 UNC80Q8N2C7 3258 aa14.51□□□□□ -0.09
CSMD1-205ENST00000519623 RAD50Q92878 1312 aa14.51□□□□□ -0.09
CSMD1-205ENST00000519623 PALM3A6NDB9 673 aaPredicted RBP14.51□□□□□ -0.09
CSMD1-205ENST00000519623 KLRF2D3W0D1 207 aa14.51□□□□□ -0.09
CSMD1-205ENST00000519623 OPLAHO14841 1288 aa14.51□□□□□ -0.09
CSMD1-205ENST00000519623 FGBP02675 491 aa14.51□□□□□ -0.09
CSMD1-205ENST00000519623 PBX2P40425 430 aa14.51□□□□□ -0.09
CSMD1-205ENST00000519623 CCL23P55773 120 aa14.51□□□□□ -0.09
CSMD1-205ENST00000519623 IRX6P78412 446 aaPredicted RBP14.51□□□□□ -0.09
CSMD1-205ENST00000519623 TTLL4Q14679 1199 aa14.51□□□□□ -0.09
CSMD1-205ENST00000519623 GRIN2CQ14957 1233 aa14.51□□□□□ -0.09
CSMD1-205ENST00000519623 NBPF20Q3BBV1 942 aa14.51□□□□□ -0.09
CSMD1-205ENST00000519623 NSUN6Q8TEA1 469 aaKnown RBP14.51□□□□□ -0.09
CSMD1-205ENST00000519623 IWS1Q96ST2 819 aa14.51□□□□□ -0.09
CSMD1-205ENST00000519623 RMDN3Q96TC7 470 aa14.51□□□□□ -0.09
CSMD1-205ENST00000519623 TAF6LQ9Y6J9 622 aa14.51□□□□□ -0.09
CSMD1-205ENST00000519623 BAZ2BQ9UIF8 2168 aaKnown RBP14.5□□□□□ -0.09
CSMD1-205ENST00000519623 DHX16O60231 1041 aaKnown RBP14.5□□□□□ -0.09
CSMD1-205ENST00000519623 KPNA6O60684 536 aa14.5□□□□□ -0.09
CSMD1-205ENST00000519623 PPP1R11O60927 126 aaPredicted RBP14.5□□□□□ -0.09
CSMD1-205ENST00000519623 SUPT20HL2P0C7V6 817 aa14.5□□□□□ -0.09
CSMD1-205ENST00000519623 SLC35G1Q2M3R5 365 aa14.5□□□□□ -0.09
CSMD1-205ENST00000519623 BRDTQ58F21 947 aaPredicted RBP14.5□□□□□ -0.09
CSMD1-205ENST00000519623 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.5□□□□□ -0.09
CSMD1-205ENST00000519623 MAFAQ8NHW3 353 aaPredicted RBP14.5□□□□□ -0.09
CSMD1-205ENST00000519623 RUFY2Q8WXA3 655 aa14.5□□□□□ -0.09
CSMD1-205ENST00000519623 TIFAQ96CG3 184 aa14.5□□□□□ -0.09
CSMD1-205ENST00000519623 PBX4Q9BYU1 374 aa14.5□□□□□ -0.09
CSMD1-205ENST00000519623 ZNF576Q9H609 170 aa14.5□□□□□ -0.09
CSMD1-205ENST00000519623 SENP2Q9HC62 589 aa14.5□□□□□ -0.09
CSMD1-205ENST00000519623 GPHNQ9NQX3 736 aaPredicted RBP14.5□□□□□ -0.09
CSMD1-205ENST00000519623 U3KPZ7 1027 aaPredicted RBP14.5□□□□□ -0.09
CSMD1-205ENST00000519623 KIAA1217Q5T5P2 1943 aa14.49□□□□□ -0.09
CSMD1-205ENST00000519623 SGSM2O43147 1006 aa14.49□□□□□ -0.09
CSMD1-205ENST00000519623 CYP2C9P11712 490 aa14.49□□□□□ -0.09
CSMD1-205ENST00000519623 HSD17B4P51659 736 aa14.49□□□□□ -0.09
CSMD1-205ENST00000519623 GHRHRQ02643 423 aa14.49□□□□□ -0.09
CSMD1-205ENST00000519623 TRDNQ13061 729 aa14.49□□□□□ -0.09
CSMD1-205ENST00000519623 STXBP2Q15833 593 aa14.49□□□□□ -0.09
CSMD1-205ENST00000519623 LY6KQ17RY6 165 aa14.49□□□□□ -0.09
CSMD1-205ENST00000519623 NFRKBQ6P4R8 1299 aa14.49□□□□□ -0.09
CSMD1-205ENST00000519623 SEPT14Q6ZU15 432 aa14.49□□□□□ -0.09
CSMD1-205ENST00000519623 RPUSD2Q8IZ73 545 aaKnown RBP14.49□□□□□ -0.09
CSMD1-205ENST00000519623 PPP1R13LQ8WUF5 828 aa14.49□□□□□ -0.09
CSMD1-205ENST00000519623 SCLYQ96I15 445 aa14.49□□□□□ -0.09
CSMD1-205ENST00000519623 AMNQ9BXJ7 453 aa14.49□□□□□ -0.09
CSMD1-205ENST00000519623 EYSQ5T1H1 3165 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 E7EWF7 191 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 ZBTB5O15062 677 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 EIF3JO75822 258 aaKnown RBP14.48□□□□□ -0.09
CSMD1-205ENST00000519623 CFBP00751 764 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 NR3C2P08235 984 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 FOSL2P15408 326 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 PTPN11Q06124 597 aaPredicted RBP14.48□□□□□ -0.09
CSMD1-205ENST00000519623 ARHGAP1Q07960 439 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 GRM4Q14833 912 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 ARHGEF16Q5VV41 709 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 STOX1Q6ZVD7 989 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 OTOP2Q7RTS6 562 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 AFG1LQ8WV93 481 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 MAP4K1Q92918 833 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 RIOX1Q9H6W3 641 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 PXMP2Q9NR77 195 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 DDX41Q9UJV9 622 aaKnown RBP14.48□□□□□ -0.09
CSMD1-205ENST00000519623 PCDHA1Q9Y5I3 950 aa14.48□□□□□ -0.09
CSMD1-205ENST00000519623 IFIT3O14879 490 aaKnown RBP14.47□□□□□ -0.09
CSMD1-205ENST00000519623 GH1P01241 217 aa14.47□□□□□ -0.09
CSMD1-205ENST00000519623 MMP3P08254 477 aa14.47□□□□□ -0.09
CSMD1-205ENST00000519623 EIF2AK2P19525 551 aaKnown RBP14.47□□□□□ -0.09
CSMD1-205ENST00000519623 TROAPQ12815 778 aa14.47□□□□□ -0.09
CSMD1-205ENST00000519623 FAM47CQ5HY64 1035 aa14.47□□□□□ -0.09
CSMD1-205ENST00000519623 IGDCC4Q8TDY8 1250 aa14.47□□□□□ -0.09
CSMD1-205ENST00000519623 KAT2BQ92831 832 aa14.47□□□□□ -0.09
CSMD1-205ENST00000519623 MAP3K20Q9NYL2 800 aaKnown RBP14.47□□□□□ -0.09
CSMD1-205ENST00000519623 PRUNE2Q8WUY3 3088 aa14.47□□□□□ -0.09
CSMD1-205ENST00000519623 CHD9Q3L8U1 2897 aa14.47□□□□□ -0.09
CSMD1-205ENST00000519623 MYH7BA7E2Y1 1941 aa14.47□□□□□ -0.09
CSMD1-205ENST00000519623 SCN5AQ14524 2016 aa14.46□□□□□ -0.09
CSMD1-205ENST00000519623 TRIP12Q14669 1992 aaPredicted RBP14.46□□□□□ -0.09
CSMD1-205ENST00000519623 CYTH3O43739 400 aa14.46□□□□□ -0.09
CSMD1-205ENST00000519623 RGS20O76081 388 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms