RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 GABREP78334 506 aa9.1□□□□□ -0.95
PTPN12-213ENST00000519553 HOMER1Q86YM7 354 aa9.1□□□□□ -0.95
PTPN12-213ENST00000519553 TEX2Q8IWB9 1127 aa9.1□□□□□ -0.95
PTPN12-213ENST00000519553 LZTR1Q8N653 840 aa9.1□□□□□ -0.95
PTPN12-213ENST00000519553 GSTCDQ8NEC7 633 aa9.1□□□□□ -0.95
PTPN12-213ENST00000519553 LIN37Q96GY3 246 aaPredicted RBP9.1□□□□□ -0.95
PTPN12-213ENST00000519553 MRPL4Q9BYD3 311 aaKnown RBP9.1□□□□□ -0.95
PTPN12-213ENST00000519553 SLC6A17Q9H1V8 727 aa9.1□□□□□ -0.95
PTPN12-213ENST00000519553 CDIP1Q9H305 208 aa9.1□□□□□ -0.95
PTPN12-213ENST00000519553 SLC52A2Q9HAB3 445 aa9.1□□□□□ -0.95
PTPN12-213ENST00000519553 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.1□□□□□ -0.95
PTPN12-213ENST00000519553 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.1□□□□□ -0.95
PTPN12-213ENST00000519553 MARCH2Q9P0N8 246 aa9.1□□□□□ -0.95
PTPN12-213ENST00000519553 TMA7Q9Y2S6 64 aaKnown RBP9.1□□□□□ -0.95
PTPN12-213ENST00000519553 PPP1R12AO14974 1030 aaPredicted RBP9.09□□□□□ -0.95
PTPN12-213ENST00000519553 MYO1BO43795 1136 aa9.09□□□□□ -0.95
PTPN12-213ENST00000519553 SDHBP21912 280 aa9.09□□□□□ -0.95
PTPN12-213ENST00000519553 FPR2P25090 351 aa9.09□□□□□ -0.95
PTPN12-213ENST00000519553 GPR85P60893 370 aa9.09□□□□□ -0.95
PTPN12-213ENST00000519553 CBX2Q14781 532 aaPredicted RBP9.09□□□□□ -0.95
PTPN12-213ENST00000519553 LBX2Q6XYB7 198 aa9.09□□□□□ -0.95
PTPN12-213ENST00000519553 SLC7A14Q8TBB6 771 aa9.09□□□□□ -0.95
PTPN12-213ENST00000519553 APPBP2Q92624 585 aa9.09□□□□□ -0.95
PTPN12-213ENST00000519553 BTG4Q9NY30 223 aa9.09□□□□□ -0.95
PTPN12-213ENST00000519553 SRGAP3O43295 1099 aa9.08□□□□□ -0.96
PTPN12-213ENST00000519553 KCNQ2O43526 872 aa9.08□□□□□ -0.96
PTPN12-213ENST00000519553 CDC45O75419 566 aa9.08□□□□□ -0.96
PTPN12-213ENST00000519553 ASMTLO95671 621 aa9.08□□□□□ -0.96
PTPN12-213ENST00000519553 FUCA1P04066 466 aa9.08□□□□□ -0.96
PTPN12-213ENST00000519553 GLI4P10075 376 aa9.08□□□□□ -0.96
PTPN12-213ENST00000519553 ARL4AP40617 200 aa9.08□□□□□ -0.96
PTPN12-213ENST00000519553 GTF2A2P52657 109 aa9.08□□□□□ -0.96
PTPN12-213ENST00000519553 TKFCQ3LXA3 575 aa9.08□□□□□ -0.96
PTPN12-213ENST00000519553 ADGRF1Q5T601 910 aa9.08□□□□□ -0.96
PTPN12-213ENST00000519553 IRF2BP1Q8IU81 584 aa9.08□□□□□ -0.96
PTPN12-213ENST00000519553 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.08□□□□□ -0.96
PTPN12-213ENST00000519553 PPARGC1AQ9UBK2 798 aaKnown RBP9.08□□□□□ -0.96
PTPN12-213ENST00000519553 SFMBT1Q9UHJ3 866 aa9.08□□□□□ -0.96
PTPN12-213ENST00000519553 PLD2O14939 933 aa9.07□□□□□ -0.96
PTPN12-213ENST00000519553 RAPGEF3O95398 923 aa9.07□□□□□ -0.96
PTPN12-213ENST00000519553 DBHP09172 617 aa9.07□□□□□ -0.96
PTPN12-213ENST00000519553 LSAMPQ13449 338 aa9.07□□□□□ -0.96
PTPN12-213ENST00000519553 BICRALQ6AI39 1079 aa9.07□□□□□ -0.96
PTPN12-213ENST00000519553 SDE2Q6IQ49 451 aa9.07□□□□□ -0.96
PTPN12-213ENST00000519553 C16orf86Q6ZW13 317 aa9.07□□□□□ -0.96
PTPN12-213ENST00000519553 IFNL3Q8IZI9 196 aa9.07□□□□□ -0.96
PTPN12-213ENST00000519553 CLUHP3Q96NS8 147 aa9.07□□□□□ -0.96
PTPN12-213ENST00000519553 NDOR1Q9UHB4 597 aa9.07□□□□□ -0.96
PTPN12-213ENST00000519553 X6R8D5 127 aa9.07□□□□□ -0.96
PTPN12-213ENST00000519553 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.06□□□□□ -0.96
PTPN12-213ENST00000519553 C22orf46C9J442 243 aa9.06□□□□□ -0.96
PTPN12-213ENST00000519553 AQP7O14520 342 aa9.06□□□□□ -0.96
PTPN12-213ENST00000519553 RBM10P98175 930 aaKnown RBP9.06□□□□□ -0.96
PTPN12-213ENST00000519553 CEP68Q76N32 757 aa9.06□□□□□ -0.96
PTPN12-213ENST00000519553 TMEM169Q96HH4 297 aa9.06□□□□□ -0.96
PTPN12-213ENST00000519553 TRIM39Q9HCM9 518 aa9.06□□□□□ -0.96
PTPN12-213ENST00000519553 H7BY64 318 aa9.05□□□□□ -0.96
PTPN12-213ENST00000519553 KIZQ2M2Z5 673 aa9.05□□□□□ -0.96
PTPN12-213ENST00000519553 WWC2Q6AWC2 1192 aa9.05□□□□□ -0.96
PTPN12-213ENST00000519553 MPZL3Q6UWV2 235 aa9.05□□□□□ -0.96
PTPN12-213ENST00000519553 BRAPQ7Z569 592 aa9.05□□□□□ -0.96
PTPN12-213ENST00000519553 KIAA0907Q7Z7F0 614 aaPredicted RBP9.05□□□□□ -0.96
PTPN12-213ENST00000519553 SYNPOQ8N3V7 929 aa9.05□□□□□ -0.96
PTPN12-213ENST00000519553 KRTAP4-8Q9BYQ9 185 aa9.05□□□□□ -0.96
PTPN12-213ENST00000519553 CLDND1Q9NY35 253 aa9.05□□□□□ -0.96
PTPN12-213ENST00000519553 CD2APQ9Y5K6 639 aa9.05□□□□□ -0.96
PTPN12-213ENST00000519553 A0A1W2PQJ5 194 aa9.04□□□□□ -0.96
PTPN12-213ENST00000519553 OR14I1A6ND48 311 aa9.04□□□□□ -0.96
PTPN12-213ENST00000519553 EFCAB14O75071 495 aa9.04□□□□□ -0.96
PTPN12-213ENST00000519553 NTRK1P04629 796 aa9.04□□□□□ -0.96
PTPN12-213ENST00000519553 CYBBP04839 570 aa9.04□□□□□ -0.96
PTPN12-213ENST00000519553 PDE6BP35913 854 aa9.04□□□□□ -0.96
PTPN12-213ENST00000519553 TCEA2Q15560 299 aa9.04□□□□□ -0.96
PTPN12-213ENST00000519553 FNDC3BQ53EP0 1204 aaKnown RBP9.04□□□□□ -0.96
PTPN12-213ENST00000519553 PLEKHG4Q58EX7 1191 aa9.04□□□□□ -0.96
PTPN12-213ENST00000519553 RPTNQ6XPR3 784 aa9.04□□□□□ -0.96
PTPN12-213ENST00000519553 PRR23BQ6ZRT6 265 aa9.04□□□□□ -0.96
PTPN12-213ENST00000519553 RIOX2Q8IUF8 465 aa9.04□□□□□ -0.96
PTPN12-213ENST00000519553 SCLYQ96I15 445 aa9.04□□□□□ -0.96
PTPN12-213ENST00000519553 CHAMP1Q96JM3 812 aa9.04□□□□□ -0.96
PTPN12-213ENST00000519553 KLHL14Q9P2G3 628 aa9.04□□□□□ -0.96
PTPN12-213ENST00000519553 NUDT19A8MXV4 375 aa9.03□□□□□ -0.96
PTPN12-213ENST00000519553 ARVCFO00192 962 aa9.03□□□□□ -0.96
PTPN12-213ENST00000519553 SMARCA5O60264 1052 aaPredicted RBP9.03□□□□□ -0.96
PTPN12-213ENST00000519553 RASGRP1O95267 797 aa9.03□□□□□ -0.96
PTPN12-213ENST00000519553 CRTAMO95727 393 aa9.03□□□□□ -0.96
PTPN12-213ENST00000519553 MPOP05164 745 aa9.03□□□□□ -0.96
PTPN12-213ENST00000519553 GRK2P25098 689 aa9.03□□□□□ -0.96
PTPN12-213ENST00000519553 GRK3P35626 688 aa9.03□□□□□ -0.96
PTPN12-213ENST00000519553 PAQR3Q6TCH7 311 aa9.03□□□□□ -0.96
PTPN12-213ENST00000519553 FGD2Q7Z6J4 655 aa9.03□□□□□ -0.96
PTPN12-213ENST00000519553 MTDHQ86UE4 582 aaKnown RBP9.03□□□□□ -0.96
PTPN12-213ENST00000519553 NETO2Q8NC67 525 aa9.03□□□□□ -0.96
PTPN12-213ENST00000519553 USP33Q8TEY7 942 aa9.03□□□□□ -0.96
PTPN12-213ENST00000519553 TRMT2BQ96GJ1 504 aaKnown RBP9.03□□□□□ -0.96
PTPN12-213ENST00000519553 FEZ1Q99689 392 aa9.03□□□□□ -0.96
PTPN12-213ENST00000519553 PCDHA9Q9Y5H5 950 aa9.03□□□□□ -0.96
PTPN12-213ENST00000519553 PCDHA8Q9Y5H6 950 aa9.03□□□□□ -0.96
PTPN12-213ENST00000519553 RFPL3O75679 317 aa9.02□□□□□ -0.97
PTPN12-213ENST00000519553 SOD2P04179 222 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms