RNA–Protein interactions for RNA: ENST00000519112.5

BRD9-217, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 861 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-217ENST00000519112 GHRHRQ02643 423 aa16.21■□□□□ 0.19
BRD9-217ENST00000519112 WTAPQ15007 396 aa16.21■□□□□ 0.19
BRD9-217ENST00000519112 CCDC62Q6P9F0 684 aa16.21■□□□□ 0.19
BRD9-217ENST00000519112 RALYLQ86SE5 291 aaKnown RBP16.21■□□□□ 0.19
BRD9-217ENST00000519112 OR6J1Q8NGC5 347 aa16.21■□□□□ 0.19
BRD9-217ENST00000519112 PIGSQ96S52 555 aa16.21■□□□□ 0.19
BRD9-217ENST00000519112 ESYT1Q9BSJ8 1104 aa16.21■□□□□ 0.19
BRD9-217ENST00000519112 TRPV6Q9H1D0 765 aa16.21■□□□□ 0.19
BRD9-217ENST00000519112 RIOX1Q9H6W3 641 aa16.21■□□□□ 0.19
BRD9-217ENST00000519112 A0A0C4DFX4 3053 aa16.21■□□□□ 0.19
BRD9-217ENST00000519112 CFBP00751 764 aa16.2■□□□□ 0.18
BRD9-217ENST00000519112 TXNP10599 105 aaKnown RBP16.2■□□□□ 0.18
BRD9-217ENST00000519112 CSF2RAP15509 400 aa16.2■□□□□ 0.18
BRD9-217ENST00000519112 HSD17B4P51659 736 aa16.2■□□□□ 0.18
BRD9-217ENST00000519112 PPP2R5BQ15173 497 aa16.2■□□□□ 0.18
BRD9-217ENST00000519112 TMEM67Q5HYA8 995 aa16.2■□□□□ 0.18
BRD9-217ENST00000519112 FAM109BQ6ICB4 259 aaPredicted RBP16.2■□□□□ 0.18
BRD9-217ENST00000519112 MCF2L2Q86YR7 1114 aa16.2■□□□□ 0.18
BRD9-217ENST00000519112 NSUN6Q8TEA1 469 aaKnown RBP16.2■□□□□ 0.18
BRD9-217ENST00000519112 SCFD2Q8WU76 684 aa16.2■□□□□ 0.18
BRD9-217ENST00000519112 PPP1R13LQ8WUF5 828 aa16.2■□□□□ 0.18
BRD9-217ENST00000519112 FAM161BQ96MY7 647 aa16.2■□□□□ 0.18
BRD9-217ENST00000519112 GUCD1Q96NT3 240 aa16.2■□□□□ 0.18
BRD9-217ENST00000519112 RMDN3Q96TC7 470 aa16.2■□□□□ 0.18
BRD9-217ENST00000519112 MPHOSPH6Q99547 160 aaKnown RBP16.2■□□□□ 0.18
BRD9-217ENST00000519112 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.2■□□□□ 0.185e-11■■□□□ 12.7
BRD9-217ENST00000519112 ERICH2A1L162 156 aa16.19■□□□□ 0.18
BRD9-217ENST00000519112 A6NJR5 290 aa16.19■□□□□ 0.18
BRD9-217ENST00000519112 NKRFO15226 690 aaKnown RBP eCLIP16.19■□□□□ 0.18
BRD9-217ENST00000519112 TLR3O15455 904 aaKnown RBP16.19■□□□□ 0.18
BRD9-217ENST00000519112 MYL3P08590 195 aa16.19■□□□□ 0.18
BRD9-217ENST00000519112 EIF2AK2P19525 551 aaKnown RBP16.19■□□□□ 0.18
BRD9-217ENST00000519112 CYP2C18P33260 490 aa16.19■□□□□ 0.18
BRD9-217ENST00000519112 CPT1AP50416 773 aa16.19■□□□□ 0.18
BRD9-217ENST00000519112 NECTIN1Q15223 517 aa16.19■□□□□ 0.18
BRD9-217ENST00000519112 SEPT14Q6ZU15 432 aa16.19■□□□□ 0.18
BRD9-217ENST00000519112 HOMER1Q86YM7 354 aa16.19■□□□□ 0.18
BRD9-217ENST00000519112 RNPC3Q96LT9 517 aaKnown RBP16.19■□□□□ 0.18
BRD9-217ENST00000519112 LY9Q9HBG7 655 aa16.19■□□□□ 0.18
BRD9-217ENST00000519112 PXMP2Q9NR77 195 aa16.19■□□□□ 0.18
BRD9-217ENST00000519112 PCDHA1Q9Y5I3 950 aa16.19■□□□□ 0.18
BRD9-217ENST00000519112 PRUNE2Q8WUY3 3088 aa16.18■□□□□ 0.18
BRD9-217ENST00000519112 SCN5AQ14524 2016 aa16.18■□□□□ 0.18
BRD9-217ENST00000519112 B4DLN1 442 aa16.18■□□□□ 0.18
BRD9-217ENST00000519112 SLC27A2O14975 620 aa16.18■□□□□ 0.18
BRD9-217ENST00000519112 ACRP10323 421 aa16.18■□□□□ 0.18
BRD9-217ENST00000519112 MRPL12P52815 198 aaKnown RBP16.18■□□□□ 0.18
BRD9-217ENST00000519112 SMAD3P84022 425 aaKnown RBP16.18■□□□□ 0.18
BRD9-217ENST00000519112 TTLL4Q14679 1199 aa16.18■□□□□ 0.18
BRD9-217ENST00000519112 LY6KQ17RY6 165 aa16.18■□□□□ 0.18
BRD9-217ENST00000519112 TMEM240Q5SV17 173 aa16.18■□□□□ 0.18
BRD9-217ENST00000519112 CENPQQ7L2Z9 268 aaPredicted RBP16.18■□□□□ 0.18
BRD9-217ENST00000519112 IWS1Q96ST2 819 aa16.18■□□□□ 0.18
BRD9-217ENST00000519112 MYL10Q9BUA6 226 aa16.18■□□□□ 0.18
BRD9-217ENST00000519112 ALDH8A1Q9H2A2 487 aaPredicted RBP16.18■□□□□ 0.18
BRD9-217ENST00000519112 TRMT13Q9NUP7 481 aaKnown RBP16.18■□□□□ 0.18
BRD9-217ENST00000519112 POLR3EQ9NVU0 708 aa16.18■□□□□ 0.18
BRD9-217ENST00000519112 GBF1Q92538 1859 aa16.17■□□□□ 0.18
BRD9-217ENST00000519112 RGS20O76081 388 aa16.17■□□□□ 0.18
BRD9-217ENST00000519112 NR3C2P08235 984 aa16.17■□□□□ 0.18
BRD9-217ENST00000519112 HOXA13P31271 388 aaPredicted RBP16.17■□□□□ 0.18
BRD9-217ENST00000519112 ARHGAP1Q07960 439 aa16.17■□□□□ 0.18
BRD9-217ENST00000519112 SART3Q15020 963 aaKnown RBP16.17■□□□□ 0.18
BRD9-217ENST00000519112 STXBP2Q15833 593 aa16.17■□□□□ 0.18
BRD9-217ENST00000519112 BMP2KLQ5H9B9 411 aa16.17■□□□□ 0.18
BRD9-217ENST00000519112 ARHGEF16Q5VV41 709 aa16.17■□□□□ 0.18
BRD9-217ENST00000519112 CREB3L3Q68CJ9 461 aa16.17■□□□□ 0.18
BRD9-217ENST00000519112 CATIPQ7Z7H3 387 aa16.17■□□□□ 0.18
BRD9-217ENST00000519112 VWCEQ96DN2 955 aa16.17■□□□□ 0.18
BRD9-217ENST00000519112 MTG1Q9BT17 334 aaPredicted RBP16.17■□□□□ 0.18
BRD9-217ENST00000519112 NOC4LQ9BVI4 516 aaKnown RBP16.17■□□□□ 0.18
BRD9-217ENST00000519112 SEZ6LQ9BYH1 1024 aa16.17■□□□□ 0.18
BRD9-217ENST00000519112 WNT8AQ9H1J5 351 aa16.17■□□□□ 0.18
BRD9-217ENST00000519112 TTYH1Q9H313 450 aaPredicted RBP16.17■□□□□ 0.18
BRD9-217ENST00000519112 DDX41Q9UJV9 622 aaKnown RBP16.17■□□□□ 0.18
BRD9-217ENST00000519112 STXBP5LQ9Y2K9 1186 aa16.17■□□□□ 0.18
BRD9-217ENST00000519112 TRIP12Q14669 1992 aaPredicted RBP16.17■□□□□ 0.18
BRD9-217ENST00000519112 CHD9Q3L8U1 2897 aa16.16■□□□□ 0.18
BRD9-217ENST00000519112 SH2B2O14492 632 aaPredicted RBP16.16■□□□□ 0.18
BRD9-217ENST00000519112 PRC1O43663 620 aa16.16■□□□□ 0.18
BRD9-217ENST00000519112 CCL23P55773 120 aa16.16■□□□□ 0.18
BRD9-217ENST00000519112 PPIGQ13427 754 aaKnown RBP eCLIP16.16■□□□□ 0.181e-6■■■□□ 15.2
BRD9-217ENST00000519112 NBPF20Q3BBV1 942 aa16.16■□□□□ 0.18
BRD9-217ENST00000519112 RASIP1Q5U651 963 aa16.16■□□□□ 0.18
BRD9-217ENST00000519112 ZNF365Q70YC5 407 aa16.16■□□□□ 0.18
BRD9-217ENST00000519112 ZNF654Q8IZM8 581 aa16.16■□□□□ 0.18
BRD9-217ENST00000519112 TMEM199Q8N511 208 aa16.16■□□□□ 0.18
BRD9-217ENST00000519112 IL31RAQ8NI17 732 aa16.16■□□□□ 0.18
BRD9-217ENST00000519112 AFG1LQ8WV93 481 aa16.16■□□□□ 0.18
BRD9-217ENST00000519112 ZFP91Q96JP5 570 aaPredicted RBP16.16■□□□□ 0.18
BRD9-217ENST00000519112 PDCD2LQ9BRP1 358 aa16.16■□□□□ 0.18
BRD9-217ENST00000519112 SEMA6BQ9H3T3 888 aa16.16■□□□□ 0.18
BRD9-217ENST00000519112 HIPK3Q9H422 1215 aa16.16■□□□□ 0.18
BRD9-217ENST00000519112 MAP3K20Q9NYL2 800 aaKnown RBP16.16■□□□□ 0.18
BRD9-217ENST00000519112 PNMA6FA0A0J9YX94 578 aa16.15■□□□□ 0.18
BRD9-217ENST00000519112 EIF3JO75822 258 aaKnown RBP16.15■□□□□ 0.18
BRD9-217ENST00000519112 MMP3P08254 477 aa16.15■□□□□ 0.18
BRD9-217ENST00000519112 CYP2C9P11712 490 aa16.15■□□□□ 0.18
BRD9-217ENST00000519112 ZNF697Q5TEC3 545 aa16.15■□□□□ 0.18
BRD9-217ENST00000519112 PIBF1Q8WXW3 757 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms