RNA–Protein interactions for RNA: ENST00000518692.1

SPIDR-207, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 726 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-207ENST00000518692 KIAA1217Q5T5P2 1943 aa20.38■□□□□ 0.85
SPIDR-207ENST00000518692 PALM3A6NDB9 673 aaPredicted RBP20.38■□□□□ 0.85
SPIDR-207ENST00000518692 KLRF2D3W0D1 207 aa20.38■□□□□ 0.85
SPIDR-207ENST00000518692 TXNP10599 105 aaKnown RBP20.38■□□□□ 0.85
SPIDR-207ENST00000518692 CPT1AP50416 773 aa20.38■□□□□ 0.85
SPIDR-207ENST00000518692 CCDC62Q6P9F0 684 aa20.38■□□□□ 0.85
SPIDR-207ENST00000518692 CHST3Q7LGC8 479 aa20.38■□□□□ 0.85
SPIDR-207ENST00000518692 MPHOSPH6Q99547 160 aaKnown RBP20.38■□□□□ 0.85
SPIDR-207ENST00000518692 WNT8AQ9H1J5 351 aa20.38■□□□□ 0.85
SPIDR-207ENST00000518692 ALDH8A1Q9H2A2 487 aaPredicted RBP20.38■□□□□ 0.85
SPIDR-207ENST00000518692 TRMT13Q9NUP7 481 aaKnown RBP20.38■□□□□ 0.85
SPIDR-207ENST00000518692 POLR3EQ9NVU0 708 aa20.38■□□□□ 0.85
SPIDR-207ENST00000518692 MRPL11Q9Y3B7 192 aaKnown RBP20.38■□□□□ 0.85
SPIDR-207ENST00000518692 U3KPZ7 1027 aaPredicted RBP20.38■□□□□ 0.85
SPIDR-207ENST00000518692 BAZ2BQ9UIF8 2168 aaKnown RBP20.38■□□□□ 0.85
SPIDR-207ENST00000518692 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.37■□□□□ 0.85
SPIDR-207ENST00000518692 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.37■□□□□ 0.85
SPIDR-207ENST00000518692 A6NJR5 290 aa20.37■□□□□ 0.85
SPIDR-207ENST00000518692 GRXCR1A8MXD5 290 aa20.37■□□□□ 0.85
SPIDR-207ENST00000518692 E7EWF7 191 aa20.37■□□□□ 0.85
SPIDR-207ENST00000518692 NKRFO15226 690 aaKnown RBP eCLIP20.37■□□□□ 0.85
SPIDR-207ENST00000518692 CCL23P55773 120 aa20.37■□□□□ 0.85
SPIDR-207ENST00000518692 TRDNQ13061 729 aa20.37■□□□□ 0.85
SPIDR-207ENST00000518692 MCF2L2Q86YR7 1114 aa20.37■□□□□ 0.85
SPIDR-207ENST00000518692 VWCEQ96DN2 955 aa20.37■□□□□ 0.85
SPIDR-207ENST00000518692 MTG1Q9BT17 334 aaPredicted RBP20.37■□□□□ 0.85
SPIDR-207ENST00000518692 SEZ6LQ9BYH1 1024 aa20.37■□□□□ 0.85
SPIDR-207ENST00000518692 MAF1Q9H063 256 aa20.37■□□□□ 0.85
SPIDR-207ENST00000518692 IL23AQ9NPF7 189 aa20.37■□□□□ 0.85
SPIDR-207ENST00000518692 IFIT3O14879 490 aaKnown RBP20.36■□□□□ 0.85
SPIDR-207ENST00000518692 ANTXR2P58335 489 aa20.36■□□□□ 0.85
SPIDR-207ENST00000518692 GRM4Q14833 912 aa20.36■□□□□ 0.85
SPIDR-207ENST00000518692 SEPT14Q6ZU15 432 aa20.36■□□□□ 0.85
SPIDR-207ENST00000518692 NSUN6Q8TEA1 469 aaKnown RBP20.36■□□□□ 0.85
SPIDR-207ENST00000518692 MYLIPQ8WY64 445 aa20.36■□□□□ 0.85
SPIDR-207ENST00000518692 MAP4K1Q92918 833 aa20.36■□□□□ 0.85
SPIDR-207ENST00000518692 RMDN3Q96TC7 470 aa20.36■□□□□ 0.85
SPIDR-207ENST00000518692 AMNQ9BXJ7 453 aa20.36■□□□□ 0.85
SPIDR-207ENST00000518692 UNC80Q8N2C7 3258 aa20.36■□□□□ 0.85
SPIDR-207ENST00000518692 A0A0C4DFX4 3053 aa20.35■□□□□ 0.85
SPIDR-207ENST00000518692 B4DLN1 442 aa20.35■□□□□ 0.85
SPIDR-207ENST00000518692 CFBP00751 764 aa20.35■□□□□ 0.85
SPIDR-207ENST00000518692 CYP2C9P11712 490 aa20.35■□□□□ 0.85
SPIDR-207ENST00000518692 EIF2AK2P19525 551 aaKnown RBP20.35■□□□□ 0.85
SPIDR-207ENST00000518692 DNAJB2P25686 324 aa20.35■□□□□ 0.85
SPIDR-207ENST00000518692 PBX2P40425 430 aa20.35■□□□□ 0.85
SPIDR-207ENST00000518692 HSD17B4P51659 736 aa20.35■□□□□ 0.85
SPIDR-207ENST00000518692 MRPL12P52815 198 aaKnown RBP20.35■□□□□ 0.85
SPIDR-207ENST00000518692 TTLL4Q14679 1199 aa20.35■□□□□ 0.85
SPIDR-207ENST00000518692 LY6KQ17RY6 165 aa20.35■□□□□ 0.85
SPIDR-207ENST00000518692 NBPF20Q3BBV1 942 aa20.35■□□□□ 0.85
SPIDR-207ENST00000518692 CXXC1Q9P0U4 656 aaPredicted RBP20.35■□□□□ 0.85
SPIDR-207ENST00000518692 ZBTB5O15062 677 aa20.34■□□□□ 0.85
SPIDR-207ENST00000518692 CYTH3O43739 400 aa20.34■□□□□ 0.85
SPIDR-207ENST00000518692 GHRHRQ02643 423 aa20.34■□□□□ 0.85
SPIDR-207ENST00000518692 TROAPQ12815 778 aa20.34■□□□□ 0.85
SPIDR-207ENST00000518692 COL9A3Q14050 684 aaPredicted RBP20.34■□□□□ 0.85
SPIDR-207ENST00000518692 PSRC1Q6PGN9 363 aaPredicted RBP20.34■□□□□ 0.85
SPIDR-207ENST00000518692 NCOA7Q8NI08 942 aa20.34■□□□□ 0.85
SPIDR-207ENST00000518692 AFG1LQ8WV93 481 aa20.34■□□□□ 0.85
SPIDR-207ENST00000518692 SCLYQ96I15 445 aa20.34■□□□□ 0.85
SPIDR-207ENST00000518692 IWS1Q96ST2 819 aa20.34■□□□□ 0.85
SPIDR-207ENST00000518692 RIOX1Q9H6W3 641 aa20.34■□□□□ 0.85
SPIDR-207ENST00000518692 GPHNQ9NQX3 736 aaPredicted RBP20.34■□□□□ 0.85
SPIDR-207ENST00000518692 PXMP2Q9NR77 195 aa20.34■□□□□ 0.85
SPIDR-207ENST00000518692 RBM8AQ9Y5S9 174 aaKnown RBP20.34■□□□□ 0.85
SPIDR-207ENST00000518692 SCN5AQ14524 2016 aa20.33■□□□□ 0.85
SPIDR-207ENST00000518692 TMEM265A0A087WTH1 108 aa20.33■□□□□ 0.85
SPIDR-207ENST00000518692 ARHGAP1Q07960 439 aa20.33■□□□□ 0.85
SPIDR-207ENST00000518692 WTAPQ15007 396 aa20.33■□□□□ 0.85
SPIDR-207ENST00000518692 STXBP2Q15833 593 aa20.33■□□□□ 0.85
SPIDR-207ENST00000518692 ARHGEF16Q5VV41 709 aa20.33■□□□□ 0.85
SPIDR-207ENST00000518692 RALYLQ86SE5 291 aaKnown RBP20.33■□□□□ 0.85
SPIDR-207ENST00000518692 HOMER1Q86YM7 354 aa20.33■□□□□ 0.85
SPIDR-207ENST00000518692 MB21D2Q8IYB1 491 aaPredicted RBP20.33■□□□□ 0.85
SPIDR-207ENST00000518692 IGDCC4Q8TDY8 1250 aa20.33■□□□□ 0.85
SPIDR-207ENST00000518692 HERVK_113Q902F9 699 aa20.33■□□□□ 0.85
SPIDR-207ENST00000518692 PIGSQ96S52 555 aa20.33■□□□□ 0.85
SPIDR-207ENST00000518692 PBX4Q9BYU1 374 aa20.33■□□□□ 0.85
SPIDR-207ENST00000518692 PCDHA1Q9Y5I3 950 aa20.33■□□□□ 0.85
SPIDR-207ENST00000518692 DLL1O00548 723 aa20.32■□□□□ 0.84
SPIDR-207ENST00000518692 NR3C2P08235 984 aa20.32■□□□□ 0.84
SPIDR-207ENST00000518692 HOXA13P31271 388 aaPredicted RBP20.32■□□□□ 0.84
SPIDR-207ENST00000518692 GRIN2CQ14957 1233 aa20.32■□□□□ 0.84
SPIDR-207ENST00000518692 BRDTQ58F21 947 aaPredicted RBP20.32■□□□□ 0.84
SPIDR-207ENST00000518692 FAM47CQ5HY64 1035 aa20.32■□□□□ 0.84
SPIDR-207ENST00000518692 SKAP1Q86WV1 359 aa20.32■□□□□ 0.84
SPIDR-207ENST00000518692 TIFAQ96CG3 184 aa20.32■□□□□ 0.84
SPIDR-207ENST00000518692 DDX41Q9UJV9 622 aaKnown RBP20.32■□□□□ 0.84
SPIDR-207ENST00000518692 GBF1Q92538 1859 aa20.32■□□□□ 0.84
SPIDR-207ENST00000518692 MYH7BA7E2Y1 1941 aa20.31■□□□□ 0.84
SPIDR-207ENST00000518692 KPNA6O60684 536 aa20.31■□□□□ 0.84
SPIDR-207ENST00000518692 RGS20O76081 388 aa20.31■□□□□ 0.84
SPIDR-207ENST00000518692 FGBP02675 491 aa20.31■□□□□ 0.84
SPIDR-207ENST00000518692 MMP3P08254 477 aa20.31■□□□□ 0.84
SPIDR-207ENST00000518692 TMEM67Q5HYA8 995 aa20.31■□□□□ 0.84
SPIDR-207ENST00000518692 NFRKBQ6P4R8 1299 aa20.31■□□□□ 0.84
SPIDR-207ENST00000518692 OTOP2Q7RTS6 562 aa20.31■□□□□ 0.84
SPIDR-207ENST00000518692 LSG1Q9H089 658 aaKnown RBP20.31■□□□□ 0.84
SPIDR-207ENST00000518692 PRUNE2Q8WUY3 3088 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms