RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 CCDC194A0A1B0GVG4 234 aa12□□□□□ -0.49
BRD9-216ENST00000518251 FAM205CA6NFA0 338 aa12□□□□□ -0.49
BRD9-216ENST00000518251 GADD45BO75293 160 aaPredicted RBP12□□□□□ -0.49
BRD9-216ENST00000518251 GCLCP48506 637 aaPredicted RBP12□□□□□ -0.49
BRD9-216ENST00000518251 TRAPPC10P48553 1259 aa12□□□□□ -0.49
BRD9-216ENST00000518251 SNAP25P60880 206 aa12□□□□□ -0.49
BRD9-216ENST00000518251 SF3A1Q15459 793 aaKnown RBP12□□□□□ -0.49
BRD9-216ENST00000518251 SH3D19Q5HYK7 790 aa12□□□□□ -0.49
BRD9-216ENST00000518251 EARS2Q5JPH6 523 aaKnown RBP12□□□□□ -0.49
BRD9-216ENST00000518251 KRT25Q7Z3Z0 450 aa12□□□□□ -0.49
BRD9-216ENST00000518251 TDHQ8IZJ6 230 aa12□□□□□ -0.49
BRD9-216ENST00000518251 REXO1Q8N1G1 1221 aaKnown RBP12□□□□□ -0.49
BRD9-216ENST00000518251 DEFB123Q8N688 67 aa12□□□□□ -0.49
BRD9-216ENST00000518251 LINC00301Q8NCQ3 95 aa12□□□□□ -0.49
BRD9-216ENST00000518251 RASGRP4Q8TDF6 673 aa12□□□□□ -0.49
BRD9-216ENST00000518251 KCNG4Q8TDN1 519 aa12□□□□□ -0.49
BRD9-216ENST00000518251 CUL5Q93034 780 aa12□□□□□ -0.49
BRD9-216ENST00000518251 SLF1Q9BQI6 1058 aa12□□□□□ -0.49
BRD9-216ENST00000518251 GLT8D2Q9H1C3 349 aa12□□□□□ -0.49
BRD9-216ENST00000518251 ASCC2Q9H1I8 757 aaPredicted RBP12□□□□□ -0.49
BRD9-216ENST00000518251 C11orf49Q9H6J7 331 aa12□□□□□ -0.49
BRD9-216ENST00000518251 RIC8AQ9NPQ8 531 aa12□□□□□ -0.49
BRD9-216ENST00000518251 FBXO28Q9NVF7 368 aa12□□□□□ -0.49
BRD9-216ENST00000518251 MORF4L1Q9UBU8 362 aa12□□□□□ -0.49
BRD9-216ENST00000518251 OGDHLQ9ULD0 1010 aa12□□□□□ -0.49
BRD9-216ENST00000518251 CEP131Q9UPN4 1083 aa12□□□□□ -0.49
BRD9-216ENST00000518251 RPTORQ8N122 1335 aa12□□□□□ -0.49
BRD9-216ENST00000518251 UNC80Q8N2C7 3258 aa12□□□□□ -0.49
BRD9-216ENST00000518251 CEP290O15078 2479 aa12□□□□□ -0.49
BRD9-216ENST00000518251 GOLGA6L4A6NEF3 574 aa11.99□□□□□ -0.49
BRD9-216ENST00000518251 ADAMTS3O15072 1205 aa11.99□□□□□ -0.49
BRD9-216ENST00000518251 SPTLC2O15270 562 aa11.99□□□□□ -0.49
BRD9-216ENST00000518251 TOB1P50616 345 aaPredicted RBP11.99□□□□□ -0.49
BRD9-216ENST00000518251 NONOQ15233 471 aaKnown RBP eCLIP11.99□□□□□ -0.49
BRD9-216ENST00000518251 USH1GQ495M9 461 aa11.99□□□□□ -0.49
BRD9-216ENST00000518251 TTC38Q5R3I4 469 aa11.99□□□□□ -0.49
BRD9-216ENST00000518251 CCDC174Q6PII3 467 aa11.99□□□□□ -0.49
BRD9-216ENST00000518251 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
BRD9-216ENST00000518251 PRPF38AQ8NAV1 312 aaKnown RBP11.99□□□□□ -0.49
BRD9-216ENST00000518251 GPT2Q8TD30 523 aa11.99□□□□□ -0.49
BRD9-216ENST00000518251 HMX1Q9NP08 348 aaPredicted RBP11.99□□□□□ -0.49
BRD9-216ENST00000518251 PPP1R9AQ9ULJ8 1098 aa11.99□□□□□ -0.49
BRD9-216ENST00000518251 STXBP5LQ9Y2K9 1186 aa11.99□□□□□ -0.49
BRD9-216ENST00000518251 ABCB11O95342 1321 aa11.98□□□□□ -0.49
BRD9-216ENST00000518251 PEX10O60683 326 aa11.98□□□□□ -0.49
BRD9-216ENST00000518251 PPP6R2O75170 966 aa11.98□□□□□ -0.49
BRD9-216ENST00000518251 FLOT1O75955 427 aa11.98□□□□□ -0.49
BRD9-216ENST00000518251 BMP15O95972 392 aa11.98□□□□□ -0.49
BRD9-216ENST00000518251 COL6A1P12109 1028 aa11.98□□□□□ -0.49
BRD9-216ENST00000518251 PRKAR2AP13861 404 aaKnown RBP11.98□□□□□ -0.49
BRD9-216ENST00000518251 ATP2B1P20020 1258 aa11.98□□□□□ -0.49
BRD9-216ENST00000518251 ME1P48163 572 aa11.98□□□□□ -0.49
BRD9-216ENST00000518251 MRPL12P52815 198 aaKnown RBP11.98□□□□□ -0.49
BRD9-216ENST00000518251 SLC39A14Q15043 492 aa11.98□□□□□ -0.49
BRD9-216ENST00000518251 PTPAQ15257 358 aa11.98□□□□□ -0.49
BRD9-216ENST00000518251 SOCS4Q8WXH5 440 aa11.98□□□□□ -0.49
BRD9-216ENST00000518251 TXNRD2Q9NNW7 524 aa11.98□□□□□ -0.49
BRD9-216ENST00000518251 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.98□□□□□ -0.49
BRD9-216ENST00000518251 MTMR10Q9NXD2 777 aa11.98□□□□□ -0.49
BRD9-216ENST00000518251 PCDHB6Q9Y5E3 794 aa11.98□□□□□ -0.49
BRD9-216ENST00000518251 A0A0G2JMZ2 1700 aa11.97□□□□□ -0.49
BRD9-216ENST00000518251 FDX1P10109 184 aa11.97□□□□□ -0.49
BRD9-216ENST00000518251 CLK2P49760 499 aaKnown RBP11.97□□□□□ -0.49
BRD9-216ENST00000518251 PABPC4Q13310 644 aaKnown RBP eCLIP11.97□□□□□ -0.49
BRD9-216ENST00000518251 UBE2SQ16763 222 aa11.97□□□□□ -0.49
BRD9-216ENST00000518251 TPRNQ4KMQ1 711 aa11.97□□□□□ -0.49
BRD9-216ENST00000518251 JAKMIP3Q5VZ66 844 aa11.97□□□□□ -0.49
BRD9-216ENST00000518251 MCTP2Q6DN12 878 aa11.97□□□□□ -0.49
BRD9-216ENST00000518251 PGBD1Q96JS3 809 aa11.97□□□□□ -0.49
BRD9-216ENST00000518251 PSTPIP2Q9H939 334 aa11.97□□□□□ -0.49
BRD9-216ENST00000518251 TMEM260Q9NX78 707 aa11.97□□□□□ -0.49
BRD9-216ENST00000518251 PNMA2Q9UL42 364 aa11.97□□□□□ -0.49
BRD9-216ENST00000518251 CTDP1Q9Y5B0 961 aaPredicted RBP11.97□□□□□ -0.49
BRD9-216ENST00000518251 MORC2Q9Y6X9 1032 aaPredicted RBP11.97□□□□□ -0.49
BRD9-216ENST00000518251 FRMPD3Q5JV73 1810 aa11.97□□□□□ -0.49
BRD9-216ENST00000518251 RLFQ13129 1914 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 USP17L15C9J2P7 530 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 USP17L13C9JLJ4 530 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 USP17L11C9JVI0 530 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 USP17L18D6R9N7 530 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 USP17L22D6RA61 530 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 USP17L17D6RBQ6 530 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 USP17L19D6RCP7 530 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 USP17L20D6RJB6 530 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 WNT7AO00755 349 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 ZBED4O75132 1171 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 ICAM1P05362 532 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 TAL1P17542 331 aaPredicted RBP11.96□□□□□ -0.49
BRD9-216ENST00000518251 USP17L24Q0WX57 530 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 AP3B2Q13367 1082 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 INF2Q27J81 1249 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 CAVIN1Q6NZI2 390 aaKnown RBP11.96□□□□□ -0.49
BRD9-216ENST00000518251 CATSPERGQ6ZRH7 1159 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 NEK8Q86SG6 692 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 TEX2Q8IWB9 1127 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 SYAP1Q96A49 352 aaPredicted RBP11.96□□□□□ -0.49
BRD9-216ENST00000518251 UBE2OQ9C0C9 1292 aaKnown RBP11.96□□□□□ -0.49
BRD9-216ENST00000518251 SLC38A10Q9HBR0 1119 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 CCPG1Q9ULG6 757 aa11.96□□□□□ -0.49
BRD9-216ENST00000518251 PCDHA7Q9UN72 937 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms