RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 P2RX7Q99572 595 aaKnown RBP29.8■■■□□ 2.36
COL13A1-210ENST00000517713 BLOC1S4Q9NUP1 217 aa29.8■■■□□ 2.36
COL13A1-210ENST00000517713 ARHGAP4P98171 946 aa29.79■■■□□ 2.36
COL13A1-210ENST00000517713 CHURC1Q8WUH1 139 aa29.79■■■□□ 2.36
COL13A1-210ENST00000517713 SGIP1Q9BQI5 828 aa29.79■■■□□ 2.36
COL13A1-210ENST00000517713 LTBP3Q9NS15 1303 aa29.79■■■□□ 2.36
COL13A1-210ENST00000517713 SPDYE3A6NKU9 549 aa29.79■■■□□ 2.36
COL13A1-210ENST00000517713 ASNSP08243 561 aa29.79■■■□□ 2.36
COL13A1-210ENST00000517713 ASIC1P78348 528 aa29.79■■■□□ 2.36
COL13A1-210ENST00000517713 STIM1Q13586 685 aa29.79■■■□□ 2.36
COL13A1-210ENST00000517713 SPECC1LQ69YQ0 1117 aa29.79■■■□□ 2.36
COL13A1-210ENST00000517713 GJA10Q969M2 543 aa29.79■■■□□ 2.36
COL13A1-210ENST00000517713 NUDT12Q9BQG2 462 aa29.79■■■□□ 2.36
COL13A1-210ENST00000517713 SCAF8Q9UPN6 1271 aaKnown RBP29.79■■■□□ 2.36
COL13A1-210ENST00000517713 OPLAHO14841 1288 aa29.78■■■□□ 2.36
COL13A1-210ENST00000517713 EGFRP00533 1210 aa29.78■■■□□ 2.36
COL13A1-210ENST00000517713 TAL1P17542 331 aaPredicted RBP29.78■■■□□ 2.36
COL13A1-210ENST00000517713 TBX2Q13207 712 aaPredicted RBP29.78■■■□□ 2.36
COL13A1-210ENST00000517713 TNFAIP1Q13829 316 aa29.78■■■□□ 2.36
COL13A1-210ENST00000517713 ZYXQ15942 572 aaKnown RBP29.78■■■□□ 2.36
COL13A1-210ENST00000517713 KCNMB3Q9NPA1 279 aa29.78■■■□□ 2.36
COL13A1-210ENST00000517713 EXOC1Q9NV70 894 aa29.78■■■□□ 2.36
COL13A1-210ENST00000517713 LARP4BQ92615 738 aaKnown RBP29.78■■■□□ 2.36
COL13A1-210ENST00000517713 ADD3Q9UEY8 706 aaKnown RBP29.78■■■□□ 2.36
COL13A1-210ENST00000517713 RASSF7Q02833 373 aa29.77■■■□□ 2.36
COL13A1-210ENST00000517713 PDE4DQ08499 809 aa29.77■■■□□ 2.36
COL13A1-210ENST00000517713 MCM6Q14566 821 aa29.77■■■□□ 2.36
COL13A1-210ENST00000517713 TMEM119Q4V9L6 283 aa29.77■■■□□ 2.36
COL13A1-210ENST00000517713 GTPBP4Q9BZE4 634 aaKnown RBP29.77■■■□□ 2.36
COL13A1-210ENST00000517713 PLA2G6O60733 806 aa29.76■■■□□ 2.36
COL13A1-210ENST00000517713 FILIP1LQ4L180 1135 aa29.76■■■□□ 2.36
COL13A1-210ENST00000517713 RAD54LQ92698 747 aa29.76■■■□□ 2.36
COL13A1-210ENST00000517713 KIFC2Q96AC6 838 aa29.76■■■□□ 2.36
COL13A1-210ENST00000517713 KCND1Q9NSA2 647 aa29.76■■■□□ 2.36
COL13A1-210ENST00000517713 PHF20L1A8MW92 1017 aa29.76■■■□□ 2.35
COL13A1-210ENST00000517713 PIK3CDO00329 1044 aa29.76■■■□□ 2.35
COL13A1-210ENST00000517713 SREBF1P36956 1147 aa29.76■■■□□ 2.35
COL13A1-210ENST00000517713 GMPSP49915 693 aaPredicted RBP29.76■■■□□ 2.35
COL13A1-210ENST00000517713 FAM160B2Q86V87 743 aa29.76■■■□□ 2.35
COL13A1-210ENST00000517713 MICALL2Q8IY33 904 aa29.76■■■□□ 2.35
COL13A1-210ENST00000517713 TEPSINQ96N21 525 aa29.76■■■□□ 2.35
COL13A1-210ENST00000517713 GLIS2Q9BZE0 524 aaPredicted RBP29.76■■■□□ 2.35
COL13A1-210ENST00000517713 RANBP17Q9H2T7 1088 aaKnown RBP29.76■■■□□ 2.35
COL13A1-210ENST00000517713 H7C1D1 291 aa29.75■■■□□ 2.35
COL13A1-210ENST00000517713 PSMA7O14818 248 aa29.75■■■□□ 2.35
COL13A1-210ENST00000517713 SPAG1Q07617 926 aa29.75■■■□□ 2.35
COL13A1-210ENST00000517713 SLFN12Q8IYM2 578 aa29.75■■■□□ 2.35
COL13A1-210ENST00000517713 CCDC112Q8NEF3 446 aa29.75■■■□□ 2.35
COL13A1-210ENST00000517713 LIMA1Q9UHB6 759 aaKnown RBP29.75■■■□□ 2.35
COL13A1-210ENST00000517713 TEX33O43247 280 aa29.74■■■□□ 2.35
COL13A1-210ENST00000517713 HOXA13P31271 388 aaPredicted RBP29.74■■■□□ 2.35
COL13A1-210ENST00000517713 C16orf45Q96MC5 204 aaPredicted RBP29.74■■■□□ 2.35
COL13A1-210ENST00000517713 MYMKA6NI61 221 aa29.74■■■□□ 2.35
COL13A1-210ENST00000517713 FZD9O00144 591 aa29.74■■■□□ 2.35
COL13A1-210ENST00000517713 KCNJ6P48051 423 aa29.74■■■□□ 2.35
COL13A1-210ENST00000517713 Q4G0T1 1027 aa29.74■■■□□ 2.35
COL13A1-210ENST00000517713 CCDC174Q6PII3 467 aa29.74■■■□□ 2.35
COL13A1-210ENST00000517713 CCDC84Q86UT8 332 aaPredicted RBP29.74■■■□□ 2.35
COL13A1-210ENST00000517713 TEX2Q8IWB9 1127 aa29.74■■■□□ 2.35
COL13A1-210ENST00000517713 CCAR2Q8N163 923 aaKnown RBP29.74■■■□□ 2.35
COL13A1-210ENST00000517713 DHTKD1Q96HY7 919 aaPredicted RBP29.74■■■□□ 2.35
COL13A1-210ENST00000517713 TMX1Q9H3N1 280 aa29.74■■■□□ 2.35
COL13A1-210ENST00000517713 FEM1BQ9UK73 627 aa29.74■■■□□ 2.35
COL13A1-210ENST00000517713 GJA3Q9Y6H8 435 aa29.74■■■□□ 2.35
COL13A1-210ENST00000517713 USP27XA6NNY8 438 aa29.73■■■□□ 2.35
COL13A1-210ENST00000517713 TPM2P07951 284 aa29.73■■■□□ 2.35
COL13A1-210ENST00000517713 SAMD7Q7Z3H4 446 aa29.73■■■□□ 2.35
COL13A1-210ENST00000517713 PRIMPOLQ96LW4 560 aa29.73■■■□□ 2.35
COL13A1-210ENST00000517713 LRRC27Q9C0I9 530 aa29.73■■■□□ 2.35
COL13A1-210ENST00000517713 CNOT7Q9UIV1 285 aaKnown RBP29.73■■■□□ 2.35
COL13A1-210ENST00000517713 TRIM49BA6NDI0 452 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 LRRC10BA6NIK2 292 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 KRT31Q15323 416 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 ECM1Q16610 540 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 PRR16Q569H4 304 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 TCP11X2Q5H9J9 407 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 HYIQ5T013 277 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 CNNM4Q6P4Q7 775 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 ANKRD20A12PQ8NF67 263 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 UIMC1Q96RL1 719 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 KDM3AQ9Y4C1 1321 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 ATAD5Q96QE3 1844 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 KCNJ18B7U540 433 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 TBX3O15119 743 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 CCT6AP40227 531 aaKnown RBP29.72■■■□□ 2.35
COL13A1-210ENST00000517713 PRELPP51888 382 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 GOLGA8FQ08AF8 430 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 GOLGA8DPQ0D2H9 430 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 KCNJ12Q14500 433 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 KCNK18Q7Z418 384 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 ETNPPLQ8TBG4 499 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 ZNF341Q9BYN7 854 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 NT5C3AQ9H0P0 336 aa29.72■■■□□ 2.35
COL13A1-210ENST00000517713 PVALEFA0A1B0GWK0 134 aa29.71■■■□□ 2.35
COL13A1-210ENST00000517713 PPP1R2P41236 205 aa29.71■■■□□ 2.35
COL13A1-210ENST00000517713 PMS1P54277 932 aaKnown RBP29.71■■■□□ 2.35
COL13A1-210ENST00000517713 STK4Q13043 487 aa29.71■■■□□ 2.35
COL13A1-210ENST00000517713 UNC13DQ70J99 1090 aa29.71■■■□□ 2.35
COL13A1-210ENST00000517713 FEZ1Q99689 392 aa29.71■■■□□ 2.35
COL13A1-210ENST00000517713 SLC26A4O43511 780 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms