RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 KDM4AO75164 1064 aa17.08■□□□□ 0.32
SCARNA20.5-201ENST00000516991 GOLGA8HP0CJ92 632 aa17.08■□□□□ 0.32
SCARNA20.5-201ENST00000516991 RFC2P35250 354 aa17.08■□□□□ 0.32
SCARNA20.5-201ENST00000516991 PTPN11Q06124 597 aaPredicted RBP17.08■□□□□ 0.32
SCARNA20.5-201ENST00000516991 TTLL4Q14679 1199 aa17.08■□□□□ 0.32
SCARNA20.5-201ENST00000516991 CDC37Q16543 378 aaPredicted RBP17.08■□□□□ 0.32
SCARNA20.5-201ENST00000516991 IMMTQ16891 758 aaKnown RBP17.08■□□□□ 0.32
SCARNA20.5-201ENST00000516991 CWC27Q6UX04 472 aaKnown RBP17.08■□□□□ 0.32
SCARNA20.5-201ENST00000516991 ANKS1AQ92625 1134 aa17.08■□□□□ 0.32
SCARNA20.5-201ENST00000516991 PRDM12Q9H4Q4 367 aa17.08■□□□□ 0.32
SCARNA20.5-201ENST00000516991 SLC28A3Q9HAS3 691 aa17.08■□□□□ 0.32
SCARNA20.5-201ENST00000516991 TRMT13Q9NUP7 481 aaKnown RBP17.08■□□□□ 0.32
SCARNA20.5-201ENST00000516991 CTNNA3Q9UI47 895 aa17.08■□□□□ 0.32
SCARNA20.5-201ENST00000516991 TXNP10599 105 aaKnown RBP17.07■□□□□ 0.32
SCARNA20.5-201ENST00000516991 FAM47CQ5HY64 1035 aa17.07■□□□□ 0.32
SCARNA20.5-201ENST00000516991 MCF2L2Q86YR7 1114 aa17.07■□□□□ 0.32
SCARNA20.5-201ENST00000516991 USP38Q8NB14 1042 aa17.07■□□□□ 0.32
SCARNA20.5-201ENST00000516991 SCLYQ96I15 445 aa17.07■□□□□ 0.32
SCARNA20.5-201ENST00000516991 ZSCAN10Q96SZ4 725 aaPredicted RBP17.07■□□□□ 0.32
SCARNA20.5-201ENST00000516991 KRT23Q9C075 422 aa17.07■□□□□ 0.32
SCARNA20.5-201ENST00000516991 UBA5Q9GZZ9 404 aa17.07■□□□□ 0.32
SCARNA20.5-201ENST00000516991 NKX2-4Q9H2Z4 354 aa17.07■□□□□ 0.32
SCARNA20.5-201ENST00000516991 CNNM2Q9H8M5 875 aa17.07■□□□□ 0.32
SCARNA20.5-201ENST00000516991 ZBBXA8MT70 800 aa17.06■□□□□ 0.32
SCARNA20.5-201ENST00000516991 B4E1Z4 1266 aa17.06■□□□□ 0.32
SCARNA20.5-201ENST00000516991 PITPNM1O00562 1244 aa17.06■□□□□ 0.32
SCARNA20.5-201ENST00000516991 CYP2C9P11712 490 aa17.06■□□□□ 0.32
SCARNA20.5-201ENST00000516991 ACTN1P12814 892 aa17.06■□□□□ 0.32
SCARNA20.5-201ENST00000516991 NBPF20Q3BBV1 942 aa17.06■□□□□ 0.32
SCARNA20.5-201ENST00000516991 TJAP1Q5JTD0 557 aa17.06■□□□□ 0.32
SCARNA20.5-201ENST00000516991 ADGRF4Q8IZF3 695 aa17.06■□□□□ 0.32
SCARNA20.5-201ENST00000516991 ENAHQ8N8S7 591 aaPredicted RBP17.06■□□□□ 0.32
SCARNA20.5-201ENST00000516991 NSUN6Q8TEA1 469 aaKnown RBP17.06■□□□□ 0.32
SCARNA20.5-201ENST00000516991 UBAC1Q9BSL1 405 aa17.06■□□□□ 0.32
SCARNA20.5-201ENST00000516991 MRPL11Q9Y3B7 192 aaKnown RBP17.06■□□□□ 0.32
SCARNA20.5-201ENST00000516991 PCDHA11Q9Y5I1 949 aa17.06■□□□□ 0.32
SCARNA20.5-201ENST00000516991 CHD9Q3L8U1 2897 aa17.06■□□□□ 0.32
SCARNA20.5-201ENST00000516991 KIAA1217Q5T5P2 1943 aa17.06■□□□□ 0.32
SCARNA20.5-201ENST00000516991 PARP1P09874 1014 aaKnown RBP17.05■□□□□ 0.32
SCARNA20.5-201ENST00000516991 ATP2A2P16615 1042 aaKnown RBP17.05■□□□□ 0.32
SCARNA20.5-201ENST00000516991 BFSP2Q13515 415 aa17.05■□□□□ 0.32
SCARNA20.5-201ENST00000516991 FBXO11Q86XK2 927 aa17.05■□□□□ 0.32
SCARNA20.5-201ENST00000516991 CCDC155Q8N6L0 562 aa17.05■□□□□ 0.32
SCARNA20.5-201ENST00000516991 RETREG2Q8NC44 543 aa17.05■□□□□ 0.32
SCARNA20.5-201ENST00000516991 IWS1Q96ST2 819 aa17.05■□□□□ 0.32
SCARNA20.5-201ENST00000516991 CPVLQ9H3G5 476 aa17.05■□□□□ 0.32
SCARNA20.5-201ENST00000516991 NOD1Q9Y239 953 aa17.05■□□□□ 0.32
SCARNA20.5-201ENST00000516991 YBX2Q9Y2T7 364 aaKnown RBP17.05■□□□□ 0.32
SCARNA20.5-201ENST00000516991 DHX16O60231 1041 aaKnown RBP17.04■□□□□ 0.32
SCARNA20.5-201ENST00000516991 GH1P01241 217 aa17.04■□□□□ 0.32
SCARNA20.5-201ENST00000516991 STXBP2Q15833 593 aa17.04■□□□□ 0.32
SCARNA20.5-201ENST00000516991 QRICH1Q2TAL8 776 aa17.04■□□□□ 0.32
SCARNA20.5-201ENST00000516991 PPP2R2DQ66LE6 453 aa17.04■□□□□ 0.32
SCARNA20.5-201ENST00000516991 CCDC62Q6P9F0 684 aa17.04■□□□□ 0.32
SCARNA20.5-201ENST00000516991 SYTL5Q8TDW5 730 aaPredicted RBP17.04■□□□□ 0.32
SCARNA20.5-201ENST00000516991 COPS5Q92905 334 aa17.04■□□□□ 0.32
SCARNA20.5-201ENST00000516991 ZSWIM5Q9P217 1185 aa17.04■□□□□ 0.32
SCARNA20.5-201ENST00000516991 THEGQ9P2T0 379 aa17.04■□□□□ 0.32
SCARNA20.5-201ENST00000516991 SCN5AQ14524 2016 aa17.04■□□□□ 0.32
SCARNA20.5-201ENST00000516991 ARIH2O95376 493 aa17.03■□□□□ 0.32
SCARNA20.5-201ENST00000516991 IGHDP01880 384 aa17.03■□□□□ 0.32
SCARNA20.5-201ENST00000516991 DEFB128Q7Z7B8 93 aa17.03■□□□□ 0.32
SCARNA20.5-201ENST00000516991 ATXN2LQ8WWM7 1075 aaKnown RBP17.03■□□□□ 0.32
SCARNA20.5-201ENST00000516991 VWCEQ96DN2 955 aa17.03■□□□□ 0.32
SCARNA20.5-201ENST00000516991 SLC9A7Q96T83 725 aa17.03■□□□□ 0.32
SCARNA20.5-201ENST00000516991 RMDN3Q96TC7 470 aa17.03■□□□□ 0.32
SCARNA20.5-201ENST00000516991 VCANP13611 3396 aa17.02■□□□□ 0.32
SCARNA20.5-201ENST00000516991 MMP3P08254 477 aa17.02■□□□□ 0.32
SCARNA20.5-201ENST00000516991 IGFBP4P22692 258 aa17.02■□□□□ 0.32
SCARNA20.5-201ENST00000516991 ARHGAP1Q07960 439 aa17.02■□□□□ 0.32
SCARNA20.5-201ENST00000516991 ADGRE1Q14246 886 aa17.02■□□□□ 0.32
SCARNA20.5-201ENST00000516991 IFIT1BQ5T764 474 aaKnown RBP17.02■□□□□ 0.32
SCARNA20.5-201ENST00000516991 SESTD1Q86VW0 696 aa17.02■□□□□ 0.32
SCARNA20.5-201ENST00000516991 CAGE1Q8TC20 777 aa17.02■□□□□ 0.32
SCARNA20.5-201ENST00000516991 AFG1LQ8WV93 481 aa17.02■□□□□ 0.32
SCARNA20.5-201ENST00000516991 TAAR1Q96RJ0 339 aa17.02■□□□□ 0.32
SCARNA20.5-201ENST00000516991 IQCF3P0C7M6 154 aa17.01■□□□□ 0.31
SCARNA20.5-201ENST00000516991 CASTP20810 708 aaKnown RBP17.01■□□□□ 0.31
SCARNA20.5-201ENST00000516991 RABGGTBP53611 331 aa17.01■□□□□ 0.31
SCARNA20.5-201ENST00000516991 GHRHRQ02643 423 aa17.01■□□□□ 0.31
SCARNA20.5-201ENST00000516991 TRAF1Q13077 416 aa17.01■□□□□ 0.31
SCARNA20.5-201ENST00000516991 TMEM67Q5HYA8 995 aa17.01■□□□□ 0.31
SCARNA20.5-201ENST00000516991 ARHGEF16Q5VV41 709 aa17.01■□□□□ 0.31
SCARNA20.5-201ENST00000516991 SEPT14Q6ZU15 432 aa17.01■□□□□ 0.31
SCARNA20.5-201ENST00000516991 PHOSPHO2Q8TCD6 241 aa17.01■□□□□ 0.31
SCARNA20.5-201ENST00000516991 PPM1EQ8WY54 764 aa17.01■□□□□ 0.31
SCARNA20.5-201ENST00000516991 EMID1Q96A84 441 aaPredicted RBP17.01■□□□□ 0.31
SCARNA20.5-201ENST00000516991 KATNAL1Q9BW62 490 aa17.01■□□□□ 0.31
SCARNA20.5-201ENST00000516991 AMNQ9BXJ7 453 aa17.01■□□□□ 0.31
SCARNA20.5-201ENST00000516991 JMJD4Q9H9V9 463 aa17.01■□□□□ 0.31
SCARNA20.5-201ENST00000516991 COL20A1Q9P218 1284 aa17.01■□□□□ 0.31
SCARNA20.5-201ENST00000516991 CHD7Q9P2D1 2997 aa17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 EIF3JO75822 258 aaKnown RBP17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 BAIAP3O94812 1187 aa17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 PARNO95453 639 aaKnown RBP17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 EIF2AK2P19525 551 aaKnown RBP17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 HSD17B4P51659 736 aa17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 PTGISQ16647 500 aa17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 DGKDQ16760 1214 aa17■□□□□ 0.31
SCARNA20.5-201ENST00000516991 LY6KQ17RY6 165 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms