RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 CYP26B1Q9NR63 512 aa4.93□□□□□ -1.62
RNU4-49P-201ENST00000516080 CLEC1BQ9P126 229 aa4.93□□□□□ -1.62
RNU4-49P-201ENST00000516080 FBLN5Q9UBX5 448 aa4.93□□□□□ -1.62
RNU4-49P-201ENST00000516080 FUCA1P04066 466 aa4.92□□□□□ -1.62
RNU4-49P-201ENST00000516080 PLS3P13797 630 aa4.92□□□□□ -1.62
RNU4-49P-201ENST00000516080 ATF4P18848 351 aaPredicted RBP4.92□□□□□ -1.62
RNU4-49P-201ENST00000516080 MC3RP41968 323 aa4.92□□□□□ -1.62
RNU4-49P-201ENST00000516080 SCRN1Q12765 414 aa4.92□□□□□ -1.62
RNU4-49P-201ENST00000516080 GTF2IRD2BQ6EKJ0 949 aa4.92□□□□□ -1.62
RNU4-49P-201ENST00000516080 IQCEQ6IPM2 695 aa4.92□□□□□ -1.62
RNU4-49P-201ENST00000516080 GTF2IRD2Q86UP8 949 aa4.92□□□□□ -1.62
RNU4-49P-201ENST00000516080 VPS37DQ86XT2 251 aa4.92□□□□□ -1.62
RNU4-49P-201ENST00000516080 DCP2Q8IU60 420 aaKnown RBP4.92□□□□□ -1.62
RNU4-49P-201ENST00000516080 TRIM59Q8IWR1 403 aa4.92□□□□□ -1.62
RNU4-49P-201ENST00000516080 PPP1R14AQ96A00 147 aa4.92□□□□□ -1.62
RNU4-49P-201ENST00000516080 PCDH18Q9HCL0 1135 aa4.92□□□□□ -1.62
RNU4-49P-201ENST00000516080 GPRC5CQ9NQ84 441 aa4.92□□□□□ -1.62
RNU4-49P-201ENST00000516080 UNCXA6NJT0 531 aa4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 NTRK1P04629 796 aa4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 SKOR2Q2VWA4 1001 aaPredicted RBP4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 TNNI3KQ59H18 835 aa4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 ZFYVE27Q5T4F4 411 aa4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 SMARCC2Q8TAQ2 1214 aa4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 PLEKHO2Q8TD55 490 aa4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 ZNF526Q8TF50 670 aaPredicted RBP4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 MRGPRX3Q96LB0 322 aa4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 AP5M1Q9H0R1 490 aa4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 ADAM7Q9H2U9 754 aa4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 NKX2-4Q9H2Z4 354 aa4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 BCAS3Q9H6U6 928 aa4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 CAPN10Q9HC96 672 aa4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 USP40Q9NVE5 1235 aa4.91□□□□□ -1.62
RNU4-49P-201ENST00000516080 A0A1B0GTL3 188 aa4.9□□□□□ -1.63
RNU4-49P-201ENST00000516080 THBDP07204 575 aa4.9□□□□□ -1.63
RNU4-49P-201ENST00000516080 CYP2C8P10632 490 aa4.9□□□□□ -1.63
RNU4-49P-201ENST00000516080 E4F1Q66K89 784 aaPredicted RBP4.9□□□□□ -1.63
RNU4-49P-201ENST00000516080 DBX2Q6ZNG2 339 aa4.9□□□□□ -1.63
RNU4-49P-201ENST00000516080 TTLL7Q6ZT98 887 aa4.9□□□□□ -1.63
RNU4-49P-201ENST00000516080 PRRT2Q7Z6L0 340 aaPredicted RBP4.9□□□□□ -1.63
RNU4-49P-201ENST00000516080 ADGRG2Q8IZP9 1017 aa4.9□□□□□ -1.63
RNU4-49P-201ENST00000516080 CARFQ8N187 725 aa4.9□□□□□ -1.63
RNU4-49P-201ENST00000516080 DPF3Q92784 378 aa4.9□□□□□ -1.63
RNU4-49P-201ENST00000516080 CCDC140Q96MF4 163 aa4.9□□□□□ -1.63
RNU4-49P-201ENST00000516080 SPATA25Q9BR10 227 aa4.9□□□□□ -1.63
RNU4-49P-201ENST00000516080 MARCH2Q9P0N8 246 aa4.9□□□□□ -1.63
RNU4-49P-201ENST00000516080 NTMQ9P121 344 aa4.9□□□□□ -1.63
RNU4-49P-201ENST00000516080 SMAD7O15105 426 aaKnown RBP4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 SSBP05455 408 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 HOXC12P31275 282 aa4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 SARSP49591 514 aaKnown RBP4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 GJA9P57773 515 aa4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 PLP2Q04941 152 aa4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 DLX2Q07687 328 aaPredicted RBP4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 GNL2Q13823 731 aaKnown RBP4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 UBXN11Q5T124 520 aa4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 NT5DC1Q5TFE4 455 aa4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 MROH9Q5TGP6 573 aa4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 MBLAC2Q68D91 279 aa4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 ETV3LQ6ZN32 361 aa4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 NPLOC4Q8TAT6 608 aa4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 FRS2Q8WU20 508 aa4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 SEC14L1Q92503 715 aa4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 ACTR10Q9NZ32 417 aa4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 CNOT11Q9UKZ1 510 aaKnown RBP4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 SIT1Q9Y3P8 196 aa4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 TIMM13Q9Y5L4 95 aaPredicted RBP4.89□□□□□ -1.63
RNU4-49P-201ENST00000516080 C22orf46C9J442 243 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 MYO1BO43795 1136 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 SMARCA5O60264 1052 aaPredicted RBP4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 CPP00450 1065 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 ERCC5P28715 1186 aaPredicted RBP4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 SLC6A11P48066 632 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 GTF2A2P52657 109 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 RPL11P62913 178 aaKnown RBP4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 KCNAB2Q13303 367 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 SV2CQ496J9 727 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 C6orf15Q6UXA7 325 aaPredicted RBP4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 ZC3H18Q86VM9 953 aaKnown RBP4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 RIOX2Q8IUF8 465 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 FAM178BQ8IXR5 827 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 LINC00482Q8N8I6 264 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 DIO2Q92813 273 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 ZBTB8AQ96BR9 441 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 BORCS6Q96GS4 357 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 NOX5Q96PH1 765 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 BDH2Q9BUT1 245 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 NGRNQ9NPE2 291 aaKnown RBP4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 BTG4Q9NY30 223 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 LRP2BPQ9P2M1 347 aa4.88□□□□□ -1.63
RNU4-49P-201ENST00000516080 MEFVO15553 781 aaPredicted RBP4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 PRICKLE3O43900 615 aaPredicted RBP4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 NOBOXO60393 691 aa4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 SCG5P05408 212 aa4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 ITGAVP06756 1048 aa4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 C8BP07358 591 aa4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 RTP5Q14D33 572 aa4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 FXNQ16595 210 aa4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 INF2Q27J81 1249 aa4.87□□□□□ -1.63
RNU4-49P-201ENST00000516080 SPATS1Q496A3 300 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms