RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 HDAC9Q9UKV0 1011 aa11.27□□□□□ -0.61
SMG7-215ENST00000515829 ZBTB21Q9ULJ3 1066 aa11.27□□□□□ -0.61
SMG7-215ENST00000515829 UTP11Q9Y3A2 253 aaKnown RBP11.27□□□□□ -0.61
SMG7-215ENST00000515829 GJC1P36383 396 aa11.27□□□□□ -0.61
SMG7-215ENST00000515829 GFPT1Q06210 699 aaPredicted RBP11.27□□□□□ -0.61
SMG7-215ENST00000515829 MFSD14BQ5SR56 506 aa11.27□□□□□ -0.61
SMG7-215ENST00000515829 FAM217BQ9NTX9 383 aaPredicted RBP11.27□□□□□ -0.61
SMG7-215ENST00000515829 RASAL2Q9UJF2 1139 aa11.27□□□□□ -0.61
SMG7-215ENST00000515829 CALRP27797 417 aaKnown RBP11.27□□□□□ -0.61
SMG7-215ENST00000515829 ARHGAP44Q17R89 818 aa11.27□□□□□ -0.61
SMG7-215ENST00000515829 EARS2Q5JPH6 523 aaKnown RBP11.27□□□□□ -0.61
SMG7-215ENST00000515829 GALNT17Q6IS24 598 aa11.27□□□□□ -0.61
SMG7-215ENST00000515829 CELF1Q92879 486 aaKnown RBP11.27□□□□□ -0.61
SMG7-215ENST00000515829 ADAMTS1Q9UHI8 967 aa11.27□□□□□ -0.61
SMG7-215ENST00000515829 PEAK1Q9H792 1746 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 PNPLA7Q6ZV29 1317 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 LRRC53A6NM62 1247 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 FLOT1O75955 427 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 ZNF18P17022 549 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 BEND6Q5SZJ8 279 aaPredicted RBP11.26□□□□□ -0.61
SMG7-215ENST00000515829 FNBP4Q8N3X1 1017 aaPredicted RBP11.26□□□□□ -0.61
SMG7-215ENST00000515829 ANKS4BQ8N8V4 417 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 DDX12PQ92771 950 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 ZC3H12CQ9C0D7 883 aaKnown RBP11.26□□□□□ -0.61
SMG7-215ENST00000515829 KANSL2Q9H9L4 492 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 DDX25Q9UHL0 483 aaKnown RBP11.26□□□□□ -0.61
SMG7-215ENST00000515829 POTEMA6NI47 508 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 TNFAIP3P21580 790 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 TCP10Q12799 353 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 ANKRD40Q6AI12 368 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 SRLQ86TD4 932 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 PLVAPQ9BX97 442 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 KCNK9Q9NPC2 374 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 SLC16A2P36021 539 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 DPP8Q6V1X1 898 aaPredicted RBP11.26□□□□□ -0.61
SMG7-215ENST00000515829 COG1Q8WTW3 980 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 AK8Q96MA6 479 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 CUEDC2Q9H467 287 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 KIF4AO95239 1232 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 IFT88Q13099 833 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 IQCDQ96DY2 449 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 DNM3Q9UQ16 869 aa11.26□□□□□ -0.61
SMG7-215ENST00000515829 C3P01024 1663 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 C1orf167Q5SNV9 1468 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 LAD1O00515 517 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 CYP4A11Q02928 519 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 FAM98CQ17RN3 349 aaKnown RBP11.25□□□□□ -0.61
SMG7-215ENST00000515829 RUFY4Q6ZNE9 571 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 RSRC2Q7L4I2 434 aaKnown RBP11.25□□□□□ -0.61
SMG7-215ENST00000515829 NAP1L4Q99733 375 aaKnown RBP11.25□□□□□ -0.61
SMG7-215ENST00000515829 LRRC1Q9BTT6 524 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 NUCKS1Q9H1E3 243 aaKnown RBP11.25□□□□□ -0.61
SMG7-215ENST00000515829 STIM2Q9P246 746 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 ARMCX3Q9UH62 379 aaPredicted RBP11.25□□□□□ -0.61
SMG7-215ENST00000515829 MINPP1Q9UNW1 487 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 A0A087X0B3 334 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 XRCC5P13010 732 aaKnown RBP11.25□□□□□ -0.61
SMG7-215ENST00000515829 ARHGAP25P42331 645 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 SLC1A4P43007 532 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 UBE2SQ16763 222 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 HOOK3Q86VS8 718 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 C8orf37Q96NL8 207 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 PSTPIP2Q9H939 334 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 CAPN11Q9UMQ6 739 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 PACSIN2Q9UNF0 486 aaPredicted RBP11.25□□□□□ -0.61
SMG7-215ENST00000515829 PRR16Q569H4 304 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 EFCAB13Q8IY85 973 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 NBPF3Q9H094 633 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 ANKZF1Q9H8Y5 726 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 FEZ2Q9UHY8 353 aaPredicted RBP11.25□□□□□ -0.61
SMG7-215ENST00000515829 RCAN1P53805 252 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 HAUS3Q68CZ6 603 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 ADSSL1Q8N142 457 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 SH3RF3Q8TEJ3 882 aaPredicted RBP11.25□□□□□ -0.61
SMG7-215ENST00000515829 ZNF622Q969S3 477 aaKnown RBP eCLIP11.25□□□□□ -0.612e-9■□□□□ 10.5
SMG7-215ENST00000515829 TMEM260Q9NX78 707 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 GGA1Q9UJY5 639 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 CCNL1Q9UK58 526 aaPredicted RBP11.25□□□□□ -0.61
SMG7-215ENST00000515829 DUSP10Q9Y6W6 482 aa11.25□□□□□ -0.61
SMG7-215ENST00000515829 SMIM22K7EJ46 135 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 GTF2IP78347 998 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 PPP1R7Q15435 360 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 CCDC174Q6PII3 467 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 TMC4Q7Z404 712 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 FBXL16Q8N461 479 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 MYCT1Q8N699 235 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 AP1M1Q9BXS5 423 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 MAGEF1Q9HAY2 307 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 XDHP47989 1333 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 A0A087WUV0 522 aaPredicted RBP11.24□□□□□ -0.61
SMG7-215ENST00000515829 A6NNZ2 444 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 CALUO43852 315 aaPredicted RBP11.24□□□□□ -0.61
SMG7-215ENST00000515829 PRPHP41219 470 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 MAGEA9P43362 315 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 FKBP3Q00688 224 aaKnown RBP11.24□□□□□ -0.61
SMG7-215ENST00000515829 STK4Q13043 487 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 TUBB8Q3ZCM7 444 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 GJA10Q969M2 543 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 OSBPL9Q96SU4 736 aa11.24□□□□□ -0.61
SMG7-215ENST00000515829 TMEM47Q9BQJ4 181 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms