RNA–Protein interactions for RNA: ENST00000515776.1

HMGCR-213, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 501 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-213ENST00000515776 MAP2K1Q02750 393 aaPredicted RBP4.84□□□□□ -1.63
HMGCR-213ENST00000515776 VWA3BQ502W6 1294 aa4.84□□□□□ -1.63
HMGCR-213ENST00000515776 CT47A1Q5JQC4 288 aaPredicted RBP4.84□□□□□ -1.63
HMGCR-213ENST00000515776 PPFIBP1Q86W92 1011 aa4.84□□□□□ -1.63
HMGCR-213ENST00000515776 GIPC2Q8TF65 315 aa4.84□□□□□ -1.63
HMGCR-213ENST00000515776 BORCS6Q96GS4 357 aa4.84□□□□□ -1.63
HMGCR-213ENST00000515776 BCL2L13Q9BXK5 485 aa4.84□□□□□ -1.63
HMGCR-213ENST00000515776 GP6Q9HCN6 339 aa4.84□□□□□ -1.63
HMGCR-213ENST00000515776 STK26Q9P289 416 aa4.84□□□□□ -1.63
HMGCR-213ENST00000515776 ZNRF3Q9ULT6 936 aa4.84□□□□□ -1.63
HMGCR-213ENST00000515776 PEG3Q9GZU2 1588 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 GOLIM4O00461 696 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 CD247P20963 164 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 EFEMP1Q12805 493 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 SPATS1Q496A3 300 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 NT5DC1Q5TFE4 455 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 CYP2R1Q6VVX0 501 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 USP48Q86UV5 1035 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 FERMT3Q86UX7 667 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 FIBCD1Q8N539 461 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 SMARCC1Q92922 1105 aaPredicted RBP4.83□□□□□ -1.64
HMGCR-213ENST00000515776 PTCHD1Q96NR3 888 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 SPATA25Q9BR10 227 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 TSPYL1Q9H0U9 437 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 DBR1Q9UK59 544 aaKnown RBP4.83□□□□□ -1.64
HMGCR-213ENST00000515776 FAN1Q9Y2M0 1017 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 ZNF451Q9Y4E5 1061 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 CEP83Q9Y592 693 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 PMF1-BGLAPU3KQ54 211 aa4.83□□□□□ -1.64
HMGCR-213ENST00000515776 TBC1D8O95759 1140 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 IMPDH2P12268 514 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 NCAM1P13591 858 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 IFNGR1P15260 489 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 MC3RP41968 323 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 MRE11P49959 708 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 CBX1P83916 185 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 ZYXQ15942 572 aaKnown RBP4.82□□□□□ -1.64
HMGCR-213ENST00000515776 ZXDCQ2QGD7 858 aaPredicted RBP4.82□□□□□ -1.64
HMGCR-213ENST00000515776 UBXN11Q5T124 520 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 ZFYVE27Q5T4F4 411 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 FBXW10Q5XX13 1052 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 LIPIQ6XZB0 460 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 UNC5AQ6ZN44 842 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 RUFY4Q6ZNE9 571 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 SAPCD2Q86UD0 394 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 OTUD6BQ8N6M0 293 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 TMEM87AQ8NBN3 555 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 NLGN2Q8NFZ4 835 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 MYCBPQ99417 103 aaPredicted RBP4.82□□□□□ -1.64
HMGCR-213ENST00000515776 TM9SF2Q99805 663 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 GZF1Q9H116 711 aaPredicted RBP4.82□□□□□ -1.64
HMGCR-213ENST00000515776 NOL6Q9H6R4 1146 aaKnown RBP4.82□□□□□ -1.64
HMGCR-213ENST00000515776 RXFP1Q9HBX9 757 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 SF3B6Q9Y3B4 125 aaKnown RBP4.82□□□□□ -1.64
HMGCR-213ENST00000515776 FHOD1Q9Y613 1164 aa4.82□□□□□ -1.64
HMGCR-213ENST00000515776 PHLDB1Q86UU1 1377 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 ASGR2P07307 311 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 CD3EP07766 207 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 CCDC172P0C7W6 258 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 INSRRP14616 1297 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 L1CAMP32004 1257 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 CORO7P57737 925 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 HTRA3P83110 453 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 POU4F1Q01851 419 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 ATP2B3Q16720 1220 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 CCDC96Q2M329 555 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 NBPF6Q5VWK0 638 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 NBPF5PQ86XG9 351 aaPredicted RBP4.81□□□□□ -1.64
HMGCR-213ENST00000515776 FAM9BQ8IZU0 186 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 TMTC2Q8N394 836 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 TAB3Q8N5C8 712 aaPredicted RBP4.81□□□□□ -1.64
HMGCR-213ENST00000515776 SGSM3Q96HU1 749 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 NBPF4Q96M43 638 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 ZDHHC15Q96MV8 337 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 TIGD1Q96MW7 591 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 FERD3LQ96RJ6 166 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 RNF38Q9H0F5 515 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 BCAS3Q9H6U6 928 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 USP40Q9NVE5 1235 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 TERF2IPQ9NYB0 399 aa4.81□□□□□ -1.64
HMGCR-213ENST00000515776 R3HCC1Q9Y3T6 440 aaKnown RBP4.81□□□□□ -1.64
HMGCR-213ENST00000515776 RNF123Q5XPI4 1314 aa4.8□□□□□ -1.64
HMGCR-213ENST00000515776 KIF16BQ96L93 1317 aa4.8□□□□□ -1.64
HMGCR-213ENST00000515776 SH3D21A4FU49 640 aa4.8□□□□□ -1.64
HMGCR-213ENST00000515776 ANP32CO43423 234 aa4.8□□□□□ -1.64
HMGCR-213ENST00000515776 ITGA4P13612 1032 aa4.8□□□□□ -1.64
HMGCR-213ENST00000515776 DDX10Q13206 875 aaKnown RBP4.8□□□□□ -1.64
HMGCR-213ENST00000515776 FAM50AQ14320 339 aaKnown RBP4.8□□□□□ -1.64
HMGCR-213ENST00000515776 PPP2R5DQ14738 602 aa4.8□□□□□ -1.64
HMGCR-213ENST00000515776 ZKSCAN8Q15776 578 aaPredicted RBP4.8□□□□□ -1.64
HMGCR-213ENST00000515776 LDLRAD1Q5T700 205 aa4.8□□□□□ -1.64
HMGCR-213ENST00000515776 HHIPL2Q6UWX4 724 aa4.8□□□□□ -1.64
HMGCR-213ENST00000515776 ZNF771Q7L3S4 317 aaPredicted RBP4.8□□□□□ -1.64
HMGCR-213ENST00000515776 DDX1Q92499 740 aaKnown RBP4.8□□□□□ -1.64
HMGCR-213ENST00000515776 ALG3Q92685 438 aa4.8□□□□□ -1.64
HMGCR-213ENST00000515776 NCAPGQ9BPX3 1015 aa4.8□□□□□ -1.64
HMGCR-213ENST00000515776 TMPRSS5Q9H3S3 457 aa4.8□□□□□ -1.64
HMGCR-213ENST00000515776 MYH16Q9H6N6 1097 aa4.8□□□□□ -1.64
HMGCR-213ENST00000515776 SMC4Q9NTJ3 1288 aa4.8□□□□□ -1.64
HMGCR-213ENST00000515776 DUSP10Q9Y6W6 482 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms