RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 PTPRAP18433 802 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 CYP3A7P24462 503 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 NF2P35240 595 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 SREBF1P36956 1147 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 UBA7P41226 1012 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 BACE1P56817 501 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 MTMR2Q13614 643 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 E2F4Q16254 413 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 C11orf57Q6ZUT1 292 aaPredicted RBP13.49□□□□□ -0.25
LMNA-224ENST00000515711 USP49Q70CQ1 688 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 SH3RF1Q7Z6J0 888 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 LUZP1Q86V48 1076 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 POTEDQ86YR6 584 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 SLFN12Q8IYM2 578 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 RASSF8Q8NHQ8 419 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 MBOAT7Q96N66 472 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 STK24Q9Y6E0 443 aa13.49□□□□□ -0.25
LMNA-224ENST00000515711 A0A0G2JMZ2 1700 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 SMCHD1A6NHR9 2005 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 A0A087X0B3 334 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 USP17L15C9J2P7 530 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 USP17L13C9JLJ4 530 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 USP17L11C9JVI0 530 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 USP17L18D6R9N7 530 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 USP17L22D6RA61 530 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 USP17L17D6RBQ6 530 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 USP17L19D6RCP7 530 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 USP17L20D6RJB6 530 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 TBX3O15119 743 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 TDP2O95551 362 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 VCAM1P19320 739 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 SARSP49591 514 aaKnown RBP13.48□□□□□ -0.25
LMNA-224ENST00000515711 USP17L24Q0WX57 530 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 PDIA5Q14554 519 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 IQCB1Q15051 598 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 DPCR1Q3MIW9 517 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 HS1BP3Q53T59 392 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 RRAGBQ5VZM2 374 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 CCDC174Q6PII3 467 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 USP17L6PQ6QN14 398 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 CABP7Q86V35 215 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 IGSF22Q8N9C0 903 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.48□□□□□ -0.25
LMNA-224ENST00000515711 SPATA20Q8TB22 786 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 CALML4Q96GE6 196 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 GSDMAQ96QA5 445 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 TANGO6Q9C0B7 1094 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 RMND1Q9NWS8 449 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 MAP3K20Q9NYL2 800 aaKnown RBP13.48□□□□□ -0.25
LMNA-224ENST00000515711 PPP1R9AQ9ULJ8 1098 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 CTDP1Q9Y5B0 961 aaPredicted RBP13.48□□□□□ -0.25
LMNA-224ENST00000515711 PCDHA5Q9Y5H7 936 aa13.48□□□□□ -0.25
LMNA-224ENST00000515711 MYPNQ86TC9 1320 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 KDM3AQ9Y4C1 1321 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 GCOM1H8Y6P7 765 aaPredicted RBP13.47□□□□□ -0.25
LMNA-224ENST00000515711 IKBKBO14920 756 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 GTPBP6O43824 516 aaPredicted RBP13.47□□□□□ -0.25
LMNA-224ENST00000515711 SLC37A4O43826 429 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 PPP1R12BO60237 982 aaPredicted RBP13.47□□□□□ -0.25
LMNA-224ENST00000515711 MARCH6O60337 910 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 CYP3A4P08684 503 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 POLR2MP0CAP2 368 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 CIITAP33076 1130 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 SNAP25P60880 206 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 ARHGAP4P98171 946 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 GHRHRQ02643 423 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 Q4G0T1 1027 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 PDXDC2PQ6P474 469 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 SARM1Q6SZW1 724 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 CCDC84Q86UT8 332 aaPredicted RBP13.47□□□□□ -0.25
LMNA-224ENST00000515711 MCF2L2Q86YR7 1114 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 MLKLQ8NB16 471 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 CRYGNQ8WXF5 182 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 ERCC4Q92889 916 aaPredicted RBP13.47□□□□□ -0.25
LMNA-224ENST00000515711 PAGE5Q96GU1 130 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 ZIC5Q96T25 663 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 GTPBP4Q9BZE4 634 aaKnown RBP13.47□□□□□ -0.25
LMNA-224ENST00000515711 MAF1Q9H063 256 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 RPAP3Q9H6T3 665 aaPredicted RBP13.47□□□□□ -0.25
LMNA-224ENST00000515711 TMOD4Q9NZQ9 345 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 STK17AQ9UEE5 414 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 CCPG1Q9ULG6 757 aa13.47□□□□□ -0.25
LMNA-224ENST00000515711 BIN1O00499 593 aa13.46□□□□□ -0.25
LMNA-224ENST00000515711 OPLAHO14841 1288 aa13.46□□□□□ -0.25
LMNA-224ENST00000515711 ZBED4O75132 1171 aa13.46□□□□□ -0.25
LMNA-224ENST00000515711 FLOT1O75955 427 aa13.46□□□□□ -0.25
LMNA-224ENST00000515711 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
LMNA-224ENST00000515711 IREB2P48200 963 aaKnown RBP13.46□□□□□ -0.25
LMNA-224ENST00000515711 OAZ1P54368 228 aa13.46□□□□□ -0.25
LMNA-224ENST00000515711 DPYDQ12882 1025 aa13.46□□□□□ -0.25
LMNA-224ENST00000515711 SPP2Q13103 211 aa13.46□□□□□ -0.25
LMNA-224ENST00000515711 KARSQ15046 597 aaKnown RBP13.46□□□□□ -0.25
LMNA-224ENST00000515711 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.46□□□□□ -0.25
LMNA-224ENST00000515711 ZKSCAN4Q969J2 545 aaPredicted RBP13.46□□□□□ -0.25
LMNA-224ENST00000515711 SLC38A10Q9HBR0 1119 aa13.46□□□□□ -0.25
LMNA-224ENST00000515711 EMILIN3Q9NT22 766 aa13.46□□□□□ -0.25
LMNA-224ENST00000515711 FBXO28Q9NVF7 368 aa13.46□□□□□ -0.25
LMNA-224ENST00000515711 MAN1B1Q9UKM7 699 aa13.46□□□□□ -0.25
LMNA-224ENST00000515711 CSADQ9Y600 493 aa13.46□□□□□ -0.25
LMNA-224ENST00000515711 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms