RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 PSRC1Q6PGN9 363 aaPredicted RBP20.33■□□□□ 0.85
DDX41-217ENST00000515562 TBC1D5Q92609 795 aa20.33■□□□□ 0.85
DDX41-217ENST00000515562 MTG1Q9BT17 334 aaPredicted RBP20.33■□□□□ 0.85
DDX41-217ENST00000515562 COL20A1Q9P218 1284 aa20.33■□□□□ 0.85
DDX41-217ENST00000515562 RBM8AQ9Y5S9 174 aaKnown RBP20.33■□□□□ 0.85
DDX41-217ENST00000515562 TMEM265A0A087WTH1 108 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 A6NJR5 290 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 B4GALT4O60513 344 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 CFBP00751 764 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 MYL3P08590 195 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 CSF2RAP15509 400 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 GHRHRQ02643 423 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 STXBP2Q15833 593 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 TMEM67Q5HYA8 995 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 STOX1Q6ZVD7 989 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 CATIPQ7Z7H3 387 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 SAMD3Q8N6K7 520 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 GUCD1Q96NT3 240 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 TAAR1Q96RJ0 339 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.32■□□□□ 0.844e-9■■□□□ 11.4
DDX41-217ENST00000515562 ALDH8A1Q9H2A2 487 aaPredicted RBP20.32■□□□□ 0.84
DDX41-217ENST00000515562 MAP3K20Q9NYL2 800 aaKnown RBP20.32■□□□□ 0.84
DDX41-217ENST00000515562 PCDHA1Q9Y5I3 950 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 TAF6LQ9Y6J9 622 aa20.32■□□□□ 0.84
DDX41-217ENST00000515562 KIAA1217Q5T5P2 1943 aa20.31■□□□□ 0.84
DDX41-217ENST00000515562 SUPT20HL2P0C7V6 817 aa20.31■□□□□ 0.84
DDX41-217ENST00000515562 CYP2C18P33260 490 aa20.31■□□□□ 0.84
DDX41-217ENST00000515562 HSD17B4P51659 736 aa20.31■□□□□ 0.84
DDX41-217ENST00000515562 TROAPQ12815 778 aa20.31■□□□□ 0.84
DDX41-217ENST00000515562 ARHGEF16Q5VV41 709 aa20.31■□□□□ 0.84
DDX41-217ENST00000515562 FAM161BQ96MY7 647 aa20.31■□□□□ 0.84
DDX41-217ENST00000515562 TRPV6Q9H1D0 765 aa20.31■□□□□ 0.84
DDX41-217ENST00000515562 SCN10AQ9Y5Y9 1956 aa20.31■□□□□ 0.84
DDX41-217ENST00000515562 OPLAHO14841 1288 aa20.3■□□□□ 0.84
DDX41-217ENST00000515562 PPP1R11O60927 126 aaPredicted RBP20.3■□□□□ 0.84
DDX41-217ENST00000515562 EIF2AK2P19525 551 aaKnown RBP20.3■□□□□ 0.84
DDX41-217ENST00000515562 TMEM240Q5SV17 173 aa20.3■□□□□ 0.84
DDX41-217ENST00000515562 CCDC62Q6P9F0 684 aa20.3■□□□□ 0.84
DDX41-217ENST00000515562 HOMER1Q86YM7 354 aa20.3■□□□□ 0.84
DDX41-217ENST00000515562 MB21D2Q8IYB1 491 aaPredicted RBP20.3■□□□□ 0.84
DDX41-217ENST00000515562 SLC17A8Q8NDX2 589 aa20.3■□□□□ 0.84
DDX41-217ENST00000515562 COPS5Q92905 334 aa20.3■□□□□ 0.84
DDX41-217ENST00000515562 MTA3Q9BTC8 594 aa20.3■□□□□ 0.84
DDX41-217ENST00000515562 NOC4LQ9BVI4 516 aaKnown RBP20.3■□□□□ 0.84
DDX41-217ENST00000515562 RIOX1Q9H6W3 641 aa20.3■□□□□ 0.84
DDX41-217ENST00000515562 IL23AQ9NPF7 189 aa20.3■□□□□ 0.84
DDX41-217ENST00000515562 PXMP2Q9NR77 195 aa20.3■□□□□ 0.84
DDX41-217ENST00000515562 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.29■□□□□ 0.84
DDX41-217ENST00000515562 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.29■□□□□ 0.84
DDX41-217ENST00000515562 ARIH2O95376 493 aa20.29■□□□□ 0.84
DDX41-217ENST00000515562 GH1P01241 217 aa20.29■□□□□ 0.84
DDX41-217ENST00000515562 ANTXR2P58335 489 aa20.29■□□□□ 0.84
DDX41-217ENST00000515562 NFRKBQ6P4R8 1299 aa20.29■□□□□ 0.84
DDX41-217ENST00000515562 SEPT14Q6ZU15 432 aa20.29■□□□□ 0.84
DDX41-217ENST00000515562 CENPQQ7L2Z9 268 aaPredicted RBP20.29■□□□□ 0.84
DDX41-217ENST00000515562 CHST3Q7LGC8 479 aa20.29■□□□□ 0.84
DDX41-217ENST00000515562 MTIF3Q9H2K0 278 aaKnown RBP20.29■□□□□ 0.84
DDX41-217ENST00000515562 SENP2Q9HC62 589 aa20.29■□□□□ 0.84
DDX41-217ENST00000515562 EIF3JO75822 258 aaKnown RBP20.28■□□□□ 0.84
DDX41-217ENST00000515562 RASIP1Q5U651 963 aa20.28■□□□□ 0.84
DDX41-217ENST00000515562 CASC1Q6TDU7 716 aa20.28■□□□□ 0.84
DDX41-217ENST00000515562 C16orf59Q7L2K0 433 aa20.28■□□□□ 0.84
DDX41-217ENST00000515562 IGDCC4Q8TDY8 1250 aa20.28■□□□□ 0.84
DDX41-217ENST00000515562 PIGSQ96S52 555 aa20.28■□□□□ 0.84
DDX41-217ENST00000515562 MAP3K14Q99558 947 aa20.28■□□□□ 0.84
DDX41-217ENST00000515562 ESYT1Q9BSJ8 1104 aa20.28■□□□□ 0.84
DDX41-217ENST00000515562 SEMA6BQ9H3T3 888 aa20.28■□□□□ 0.84
DDX41-217ENST00000515562 UMODL1Q5DID0 1318 aa20.27■□□□□ 0.84
DDX41-217ENST00000515562 PNMA6FA0A0J9YX94 578 aa20.27■□□□□ 0.84
DDX41-217ENST00000515562 DDAH1O94760 285 aa20.27■□□□□ 0.84
DDX41-217ENST00000515562 NR3C2P08235 984 aa20.27■□□□□ 0.84
DDX41-217ENST00000515562 DNAJB2P25686 324 aa20.27■□□□□ 0.84
DDX41-217ENST00000515562 PTPN11Q06124 597 aaPredicted RBP20.27■□□□□ 0.84
DDX41-217ENST00000515562 ARHGAP1Q07960 439 aa20.27■□□□□ 0.84
DDX41-217ENST00000515562 SLC35G1Q2M3R5 365 aa20.27■□□□□ 0.84
DDX41-217ENST00000515562 NBPF20Q3BBV1 942 aa20.27■□□□□ 0.84
DDX41-217ENST00000515562 FAM47CQ5HY64 1035 aa20.27■□□□□ 0.84
DDX41-217ENST00000515562 ZNF365Q70YC5 407 aa20.27■□□□□ 0.84
DDX41-217ENST00000515562 CTCFLQ8NI51 663 aaPredicted RBP20.27■□□□□ 0.84
DDX41-217ENST00000515562 LSG1Q9H089 658 aaKnown RBP20.27■□□□□ 0.84
DDX41-217ENST00000515562 TRMT13Q9NUP7 481 aaKnown RBP20.27■□□□□ 0.84
DDX41-217ENST00000515562 CYTH3O43739 400 aa20.26■□□□□ 0.83
DDX41-217ENST00000515562 MMP3P08254 477 aa20.26■□□□□ 0.83
DDX41-217ENST00000515562 ACRP10323 421 aa20.26■□□□□ 0.83
DDX41-217ENST00000515562 KIF5BP33176 963 aa20.26■□□□□ 0.83
DDX41-217ENST00000515562 MCM5P33992 734 aa20.26■□□□□ 0.83
DDX41-217ENST00000515562 LY6KQ17RY6 165 aa20.26■□□□□ 0.83
DDX41-217ENST00000515562 BMP2KLQ5H9B9 411 aa20.26■□□□□ 0.83
DDX41-217ENST00000515562 AFG1LQ8WV93 481 aa20.26■□□□□ 0.83
DDX41-217ENST00000515562 HERVK_113Q902F9 699 aa20.26■□□□□ 0.83
DDX41-217ENST00000515562 EMID1Q96A84 441 aaPredicted RBP20.26■□□□□ 0.83
DDX41-217ENST00000515562 CDX2Q99626 313 aaPredicted RBP20.26■□□□□ 0.83
DDX41-217ENST00000515562 PDCD2LQ9BRP1 358 aa20.26■□□□□ 0.83
DDX41-217ENST00000515562 WNT8AQ9H1J5 351 aa20.26■□□□□ 0.83
DDX41-217ENST00000515562 TTYH1Q9H313 450 aaPredicted RBP20.26■□□□□ 0.83
DDX41-217ENST00000515562 LY9Q9HBG7 655 aa20.26■□□□□ 0.83
DDX41-217ENST00000515562 MRVI1Q9Y6F6 885 aa20.26■□□□□ 0.83
DDX41-217ENST00000515562 GCOM1H8Y6P7 765 aaPredicted RBP20.25■□□□□ 0.83
DDX41-217ENST00000515562 PRC1O43663 620 aa20.25■□□□□ 0.83
DDX41-217ENST00000515562 POLR2MP0CAP2 368 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms