RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 USP17L24Q0WX57 530 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 TRIM14Q14142 442 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 EZH2Q15910 746 aaKnown RBP9.18□□□□□ -0.94
CPNE4-211ENST00000514439 ABCB5Q2M3G0 1257 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 KRT79Q5XKE5 535 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 USP17L6PQ6QN14 398 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 CSGALNACT2Q8N6G5 542 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 KIAA0895Q8NCT3 520 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 HAS1Q92839 578 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 NUDT12Q9BQG2 462 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 MRPL44Q9H9J2 332 aaKnown RBP9.18□□□□□ -0.94
CPNE4-211ENST00000514439 PCDHA1Q9Y5I3 950 aa9.18□□□□□ -0.94
CPNE4-211ENST00000514439 BICDL2A1A5D9 508 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 RNF225M0QZC1 329 aaPredicted RBP9.17□□□□□ -0.94
CPNE4-211ENST00000514439 C21orf2O43822 256 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 ENTPD3O75355 529 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 CCDC175P0C221 793 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 TMEM119Q4V9L6 283 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 CC2D2BQ6DHV5 1058 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 CNNM4Q6P4Q7 775 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 LRRN4CLQ8ND94 238 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 SUPT20HQ8NEM7 779 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 NOC3LQ8WTT2 800 aaKnown RBP9.17□□□□□ -0.94
CPNE4-211ENST00000514439 RAD54LQ92698 747 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 HPS3Q969F9 1004 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 GJA10Q969M2 543 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 PRMT6Q96LA8 375 aaPredicted RBP9.17□□□□□ -0.94
CPNE4-211ENST00000514439 WDR24Q96S15 920 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 NUP88Q99567 741 aaPredicted RBP9.17□□□□□ -0.94
CPNE4-211ENST00000514439 GTPBP4Q9BZE4 634 aaKnown RBP9.17□□□□□ -0.94
CPNE4-211ENST00000514439 GLT8D2Q9H1C3 349 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 ABHD10Q9NUJ1 306 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 ADGRG1Q9Y653 693 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 F5H6K3 240 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 PES1O00541 588 aaKnown RBP9.17□□□□□ -0.94
CPNE4-211ENST00000514439 NDUFB10O96000 172 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 GH2P01242 217 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 PPP1R2P41236 205 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 GNG11P61952 73 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 JAG1P78504 1218 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 KLRC3Q07444 240 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 ELF2Q15723 593 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 COBLL1Q53SF7 1204 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 ANKRD40Q6AI12 368 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 UNC13DQ70J99 1090 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 KCNK18Q7Z418 384 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 MB21D1Q8N884 522 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 ZNF507Q8TCN5 953 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 EEF2KMTQ96G04 330 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 ANO3Q9BYT9 981 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 SLC39A2Q9NP94 309 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 STK32BQ9NY57 414 aa9.17□□□□□ -0.94
CPNE4-211ENST00000514439 MAGEC2Q9UBF1 373 aaPredicted RBP9.17□□□□□ -0.94
CPNE4-211ENST00000514439 PVALEFA0A1B0GWK0 134 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 A0A1W2PQC6 194 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 ABCB7O75027 752 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 URI1O94763 535 aaPredicted RBP9.16□□□□□ -0.94
CPNE4-211ENST00000514439 ERVK-24P63145 666 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 EN1Q05925 392 aaPredicted RBP9.16□□□□□ -0.94
CPNE4-211ENST00000514439 RRP1BQ14684 758 aaKnown RBP9.16□□□□□ -0.94
CPNE4-211ENST00000514439 ECM1Q16610 540 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 DYMQ7RTS9 669 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 GMCL1P1Q8NEA9 526 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 GMCL1Q96IK5 515 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 CNOT6LQ96LI5 555 aaKnown RBP9.16□□□□□ -0.94
CPNE4-211ENST00000514439 CAMKK2Q96RR4 588 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 CSRNP1Q96S65 589 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 NAP1L4Q99733 375 aaKnown RBP9.16□□□□□ -0.94
CPNE4-211ENST00000514439 CCDC94Q9BW85 323 aaPredicted RBP9.16□□□□□ -0.94
CPNE4-211ENST00000514439 GOLGB1Q14789 3259 aaKnown RBP9.16□□□□□ -0.94
CPNE4-211ENST00000514439 COL2A1P02458 1487 aaPredicted RBP9.16□□□□□ -0.94
CPNE4-211ENST00000514439 A0A0U1RQJ8 604 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 B4DLN1 442 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 MARCH6O60337 910 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 PRKCSHP14314 528 aaPredicted RBP9.16□□□□□ -0.94
CPNE4-211ENST00000514439 KRT9P35527 623 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 SNAP25P60880 206 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 IKQ13123 557 aaPredicted RBP9.16□□□□□ -0.94
CPNE4-211ENST00000514439 RBM26Q5T8P6 1007 aaKnown RBP9.16□□□□□ -0.94
CPNE4-211ENST00000514439 TMTC1Q8IUR5 882 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 ATRIPQ8WXE1 791 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 TUBGCP2Q9BSJ2 902 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 KCNMB3Q9NPA1 279 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 CGNQ9P2M7 1197 aaKnown RBP9.16□□□□□ -0.94
CPNE4-211ENST00000514439 PCDHA12Q9UN75 941 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 MYH7BA7E2Y1 1941 aa9.16□□□□□ -0.94
CPNE4-211ENST00000514439 TTC26A0AVF1 554 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 SPDYE2BA6NHP3 402 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 MEIS2O14770 477 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 SPDYE6P0CI01 402 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 CASQ1P31415 396 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 USP11P51784 963 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 AP3B2Q13367 1082 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 SYDE2Q5VT97 1194 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 CYP26C1Q6V0L0 522 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 FAM114A1Q8IWE2 563 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 DDX12PQ92771 950 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 KIFC2Q96AC6 838 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 UIMC1Q96RL1 719 aa9.15□□□□□ -0.94
CPNE4-211ENST00000514439 P2RX7Q99572 595 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms