RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 TXKP42681 527 aa18.09■□□□□ 0.49
NUP54-214ENST00000514307 MRE11P49959 708 aa18.09■□□□□ 0.49
NUP54-214ENST00000514307 FXR2P51116 673 aaKnown RBP eCLIP18.09■□□□□ 0.49
NUP54-214ENST00000514307 SPECC1Q5M775 1068 aa18.09■□□□□ 0.49
NUP54-214ENST00000514307 SNRNP48Q6IEG0 339 aaKnown RBP18.09■□□□□ 0.49
NUP54-214ENST00000514307 LBX2Q6XYB7 198 aa18.09■□□□□ 0.49
NUP54-214ENST00000514307 KRBA2Q6ZNG9 492 aa18.09■□□□□ 0.49
NUP54-214ENST00000514307 RNF207Q6ZRF8 634 aa18.09■□□□□ 0.49
NUP54-214ENST00000514307 CEP57L1Q8IYX8 460 aa18.09■□□□□ 0.49
NUP54-214ENST00000514307 CHST13Q8NET6 341 aa18.09■□□□□ 0.49
NUP54-214ENST00000514307 GTF3C2Q8WUA4 911 aaPredicted RBP18.09■□□□□ 0.49
NUP54-214ENST00000514307 TBC1D5Q92609 795 aa18.09■□□□□ 0.49
NUP54-214ENST00000514307 SYMPKQ92797 1274 aaKnown RBP18.09■□□□□ 0.49
NUP54-214ENST00000514307 PCDHA12Q9UN75 941 aa18.09■□□□□ 0.49
NUP54-214ENST00000514307 MRVI1Q9Y6F6 885 aa18.09■□□□□ 0.49
NUP54-214ENST00000514307 TCHHQ07283 1943 aa18.08■□□□□ 0.49
NUP54-214ENST00000514307 DOCK1Q14185 1865 aa18.08■□□□□ 0.49
NUP54-214ENST00000514307 SPDYE16A6NNV3 312 aaPredicted RBP18.08■□□□□ 0.48
NUP54-214ENST00000514307 SLC26A4O43511 780 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 TDP2O95551 362 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 C1QTNF8P60827 252 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 GRIN1Q05586 938 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 PLS1Q14651 629 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 TMEM132BQ14DG7 1078 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 IL17AQ16552 155 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 LONRF3Q496Y0 759 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 XRRA1Q6P2D8 792 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 REPS2Q8NFH8 660 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 CRYGNQ8WXF5 182 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 EPSTI1Q96J88 318 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 P2RX7Q99572 595 aaKnown RBP18.08■□□□□ 0.48
NUP54-214ENST00000514307 PANK2Q9BZ23 570 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 CCSER1Q9C0I3 900 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 RNF146Q9NTX7 359 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 LRWD1Q9UFC0 647 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 PNMA3Q9UL41 463 aa18.08■□□□□ 0.48
NUP54-214ENST00000514307 KIF3CO14782 793 aa18.07■□□□□ 0.48
NUP54-214ENST00000514307 SLFN14P0C7P3 912 aa18.07■□□□□ 0.48
NUP54-214ENST00000514307 TECP42680 631 aa18.07■□□□□ 0.48
NUP54-214ENST00000514307 TREML2Q5T2D2 321 aa18.07■□□□□ 0.48
NUP54-214ENST00000514307 CKAP2LQ8IYA6 745 aa18.07■□□□□ 0.48
NUP54-214ENST00000514307 RASSF8Q8NHQ8 419 aa18.07■□□□□ 0.48
NUP54-214ENST00000514307 CALML4Q96GE6 196 aa18.07■□□□□ 0.48
NUP54-214ENST00000514307 KIAA1468Q9P260 1216 aa18.07■□□□□ 0.48
NUP54-214ENST00000514307 SLC45A1Q9Y2W3 748 aa18.07■□□□□ 0.48
NUP54-214ENST00000514307 POLR2AP24928 1970 aaKnown RBP18.06■□□□□ 0.48
NUP54-214ENST00000514307 FSD2A1L4K1 749 aa18.06■□□□□ 0.48
NUP54-214ENST00000514307 EDIL3O43854 480 aa18.06■□□□□ 0.48
NUP54-214ENST00000514307 SLC25A27O95847 323 aa18.06■□□□□ 0.48
NUP54-214ENST00000514307 ITGBL1O95965 494 aaPredicted RBP18.06■□□□□ 0.48
NUP54-214ENST00000514307 PRR16Q569H4 304 aa18.06■□□□□ 0.48
NUP54-214ENST00000514307 RRAGBQ5VZM2 374 aa18.06■□□□□ 0.48
NUP54-214ENST00000514307 POTEDQ86YR6 584 aa18.06■□□□□ 0.48
NUP54-214ENST00000514307 SYTL5Q8TDW5 730 aaPredicted RBP18.06■□□□□ 0.48
NUP54-214ENST00000514307 WNK4Q96J92 1243 aa18.06■□□□□ 0.48
NUP54-214ENST00000514307 ASCC2Q9H1I8 757 aaPredicted RBP18.06■□□□□ 0.48
NUP54-214ENST00000514307 CUEDC2Q9H467 287 aa18.06■□□□□ 0.48
NUP54-214ENST00000514307 ACAD9Q9H845 621 aa18.06■□□□□ 0.48
NUP54-214ENST00000514307 TTC12Q9H892 705 aaPredicted RBP18.06■□□□□ 0.48
NUP54-214ENST00000514307 HOMER2Q9NSB8 354 aa18.06■□□□□ 0.48
NUP54-214ENST00000514307 ZNF214Q9UL59 606 aaPredicted RBP18.06■□□□□ 0.48
NUP54-214ENST00000514307 NFIBO00712 420 aa18.05■□□□□ 0.48
NUP54-214ENST00000514307 SMC2O95347 1197 aa18.05■□□□□ 0.48
NUP54-214ENST00000514307 ZBTB48P10074 688 aaPredicted RBP18.05■□□□□ 0.48
NUP54-214ENST00000514307 HERVK_113P62684 666 aa18.05■□□□□ 0.48
NUP54-214ENST00000514307 MUM1L1Q5H9M0 696 aa18.05■□□□□ 0.48
NUP54-214ENST00000514307 KRT79Q5XKE5 535 aa18.05■□□□□ 0.48
NUP54-214ENST00000514307 NSMFQ6X4W1 530 aa18.05■□□□□ 0.48
NUP54-214ENST00000514307 NIPA1Q7RTP0 329 aa18.05■□□□□ 0.48
NUP54-214ENST00000514307 CABP7Q86V35 215 aa18.05■□□□□ 0.48
NUP54-214ENST00000514307 RIOX2Q8IUF8 465 aa18.05■□□□□ 0.48
NUP54-214ENST00000514307 PDILTQ8N807 584 aa18.05■□□□□ 0.48
NUP54-214ENST00000514307 IGSF22Q8N9C0 903 aa18.05■□□□□ 0.48
NUP54-214ENST00000514307 ANO10Q9NW15 660 aa18.05■□□□□ 0.48
NUP54-214ENST00000514307 SERTAD1Q9UHV2 236 aa18.05■□□□□ 0.48
NUP54-214ENST00000514307 B4DLN1 442 aa18.04■□□□□ 0.48
NUP54-214ENST00000514307 SLC37A4O43826 429 aa18.04■□□□□ 0.48
NUP54-214ENST00000514307 RPS6P62753 249 aaKnown RBP18.04■□□□□ 0.48
NUP54-214ENST00000514307 BAATQ14032 418 aaPredicted RBP18.04■□□□□ 0.48
NUP54-214ENST00000514307 CEP55Q53EZ4 464 aa18.04■□□□□ 0.48
NUP54-214ENST00000514307 ARHGEF16Q5VV41 709 aa18.04■□□□□ 0.48
NUP54-214ENST00000514307 GPAT2Q6NUI2 795 aa18.04■□□□□ 0.48
NUP54-214ENST00000514307 USP49Q70CQ1 688 aa18.04■□□□□ 0.48
NUP54-214ENST00000514307 GAS2L3Q86XJ1 694 aa18.04■□□□□ 0.48
NUP54-214ENST00000514307 ANP32BQ92688 251 aaKnown RBP18.04■□□□□ 0.48
NUP54-214ENST00000514307 DHX58Q96C10 678 aa18.04■□□□□ 0.48
NUP54-214ENST00000514307 CDK5RAP3Q96JB5 506 aa18.04■□□□□ 0.48
NUP54-214ENST00000514307 NAT10Q9H0A0 1025 aaKnown RBP18.04■□□□□ 0.48
NUP54-214ENST00000514307 KCNMB3Q9NPA1 279 aa18.04■□□□□ 0.48
NUP54-214ENST00000514307 RIPK3Q9Y572 518 aa18.04■□□□□ 0.48
NUP54-214ENST00000514307 ATAD5Q96QE3 1844 aa18.04■□□□□ 0.48
NUP54-214ENST00000514307 MEIS1O00470 390 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 STAT6P42226 847 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 SETQ01105 290 aaPredicted RBP18.03■□□□□ 0.48
NUP54-214ENST00000514307 AMPD3Q01432 767 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 TYRO3Q06418 890 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 FMR1Q06787 632 aaKnown RBP eCLIP18.03■□□□□ 0.48
NUP54-214ENST00000514307 MOGSQ13724 837 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 UVSSAQ2YD98 709 aa18.03■□□□□ 0.48
NUP54-214ENST00000514307 SPRYD7Q5W111 196 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms