RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 KPNA6O60684 536 aa14.32□□□□□ -0.12
SFXN1-210ENST00000513725 HOXB3P14651 431 aaPredicted RBP14.32□□□□□ -0.12
SFXN1-210ENST00000513725 ATF7P17544 494 aaPredicted RBP14.32□□□□□ -0.12
SFXN1-210ENST00000513725 CTNNB1P35222 781 aa14.32□□□□□ -0.12
SFXN1-210ENST00000513725 ANGPT1Q15389 498 aa14.32□□□□□ -0.12
SFXN1-210ENST00000513725 DUSP28Q4G0W2 176 aa14.32□□□□□ -0.12
SFXN1-210ENST00000513725 TMEM63BQ5T3F8 832 aa14.32□□□□□ -0.12
SFXN1-210ENST00000513725 EEPD1Q7L9B9 569 aa14.32□□□□□ -0.12
SFXN1-210ENST00000513725 FBXO16Q8IX29 292 aaPredicted RBP14.32□□□□□ -0.12
SFXN1-210ENST00000513725 RUBCNQ92622 972 aa14.32□□□□□ -0.12
SFXN1-210ENST00000513725 CLEC1BQ9P126 229 aa14.32□□□□□ -0.12
SFXN1-210ENST00000513725 ATG2AQ2TAZ0 1938 aa14.32□□□□□ -0.12
SFXN1-210ENST00000513725 MICAL3Q7RTP6 2002 aa14.32□□□□□ -0.12
SFXN1-210ENST00000513725 GRM6O15303 877 aa14.31□□□□□ -0.12
SFXN1-210ENST00000513725 MTMR3Q13615 1198 aa14.31□□□□□ -0.12
SFXN1-210ENST00000513725 PRPF38AQ8NAV1 312 aaKnown RBP14.31□□□□□ -0.12
SFXN1-210ENST00000513725 KREMEN2Q8NCW0 462 aa14.31□□□□□ -0.12
SFXN1-210ENST00000513725 CYP2W1Q8TAV3 490 aa14.31□□□□□ -0.12
SFXN1-210ENST00000513725 RAVER2Q9HCJ3 691 aaKnown RBP14.31□□□□□ -0.12
SFXN1-210ENST00000513725 VTA1Q9NP79 307 aa14.31□□□□□ -0.12
SFXN1-210ENST00000513725 SWAP70Q9UH65 585 aa14.31□□□□□ -0.12
SFXN1-210ENST00000513725 C5orf67F2Z3F1 127 aa14.3□□□□□ -0.12
SFXN1-210ENST00000513725 LGR5O75473 907 aa14.3□□□□□ -0.12
SFXN1-210ENST00000513725 UBTFL1P0CB47 393 aaPredicted RBP14.3□□□□□ -0.12
SFXN1-210ENST00000513725 CKBP12277 381 aa14.3□□□□□ -0.12
SFXN1-210ENST00000513725 EEF2P13639 858 aaKnown RBP14.3□□□□□ -0.12
SFXN1-210ENST00000513725 RBL2Q08999 1139 aa14.3□□□□□ -0.12
SFXN1-210ENST00000513725 EFHBQ8N7U6 833 aa14.3□□□□□ -0.12
SFXN1-210ENST00000513725 OR6J1Q8NGC5 347 aa14.3□□□□□ -0.12
SFXN1-210ENST00000513725 SORCS3Q9UPU3 1222 aa14.3□□□□□ -0.12
SFXN1-210ENST00000513725 COG6Q9Y2V7 657 aa14.3□□□□□ -0.12
SFXN1-210ENST00000513725 RWDD3Q9Y3V2 267 aa14.3□□□□□ -0.12
SFXN1-210ENST00000513725 RAD50Q92878 1312 aa14.3□□□□□ -0.12
SFXN1-210ENST00000513725 CSPG5O95196 566 aa14.29□□□□□ -0.12
SFXN1-210ENST00000513725 CYP2E1P05181 493 aaPredicted RBP14.29□□□□□ -0.12
SFXN1-210ENST00000513725 ADRB1P08588 477 aa14.29□□□□□ -0.12
SFXN1-210ENST00000513725 AKR1B1P15121 316 aa14.29□□□□□ -0.12
SFXN1-210ENST00000513725 ATXN1P54253 815 aaKnown RBP14.29□□□□□ -0.12
SFXN1-210ENST00000513725 CHMP4BP1P59074 171 aa14.29□□□□□ -0.12
SFXN1-210ENST00000513725 DMWDQ09019 674 aa14.29□□□□□ -0.12
SFXN1-210ENST00000513725 E9PSI1 815 aa14.28□□□□□ -0.12
SFXN1-210ENST00000513725 MMP1P03956 469 aa14.28□□□□□ -0.12
SFXN1-210ENST00000513725 BMPR1AP36894 532 aa14.28□□□□□ -0.12
SFXN1-210ENST00000513725 TTC39AQ5SRH9 613 aa14.28□□□□□ -0.12
SFXN1-210ENST00000513725 CCDC105Q8IYK2 499 aa14.28□□□□□ -0.12
SFXN1-210ENST00000513725 FIBCD1Q8N539 461 aa14.28□□□□□ -0.12
SFXN1-210ENST00000513725 TOP1MTQ969P6 601 aa14.28□□□□□ -0.12
SFXN1-210ENST00000513725 CCDC17Q96LX7 622 aa14.28□□□□□ -0.12
SFXN1-210ENST00000513725 WDR11Q9BZH6 1224 aa14.28□□□□□ -0.12
SFXN1-210ENST00000513725 ACAD9Q9H845 621 aa14.28□□□□□ -0.12
SFXN1-210ENST00000513725 HOMER2Q9NSB8 354 aa14.28□□□□□ -0.12
SFXN1-210ENST00000513725 MCM9Q9NXL9 1143 aa14.28□□□□□ -0.12
SFXN1-210ENST00000513725 HDAC5Q9UQL6 1122 aa14.28□□□□□ -0.12
SFXN1-210ENST00000513725 NAV1Q8NEY1 1877 aa14.27□□□□□ -0.12
SFXN1-210ENST00000513725 PTPRCP08575 1304 aa14.27□□□□□ -0.12
SFXN1-210ENST00000513725 EMSYQ7Z589 1322 aa14.27□□□□□ -0.12
SFXN1-210ENST00000513725 UPP2O95045 317 aa14.27□□□□□ -0.13
SFXN1-210ENST00000513725 OAZ1P54368 228 aa14.27□□□□□ -0.13
SFXN1-210ENST00000513725 GDF6Q6KF10 455 aaPredicted RBP14.27□□□□□ -0.13
SFXN1-210ENST00000513725 DHX38Q92620 1227 aaKnown RBP14.27□□□□□ -0.13
SFXN1-210ENST00000513725 KANSL2Q9H9L4 492 aa14.27□□□□□ -0.13
SFXN1-210ENST00000513725 SLC38A10Q9HBR0 1119 aa14.27□□□□□ -0.13
SFXN1-210ENST00000513725 BARX2Q9UMQ3 279 aaPredicted RBP14.27□□□□□ -0.13
SFXN1-210ENST00000513725 OTOGLQ3ZCN5 2332 aa14.27□□□□□ -0.13
SFXN1-210ENST00000513725 MYH8P13535 1937 aa14.26□□□□□ -0.13
SFXN1-210ENST00000513725 BRD1O95696 1058 aa14.26□□□□□ -0.13
SFXN1-210ENST00000513725 CCDC158Q5M9N0 1113 aa14.26□□□□□ -0.13
SFXN1-210ENST00000513725 SESTD1Q86VW0 696 aa14.26□□□□□ -0.13
SFXN1-210ENST00000513725 DCLK2Q8N568 766 aa14.26□□□□□ -0.13
SFXN1-210ENST00000513725 DTWD2Q8NBA8 298 aa14.26□□□□□ -0.13
SFXN1-210ENST00000513725 FLCNQ8NFG4 579 aa14.26□□□□□ -0.13
SFXN1-210ENST00000513725 DBF4BQ8NFT6 615 aa14.26□□□□□ -0.13
SFXN1-210ENST00000513725 SUSD6Q92537 303 aa14.26□□□□□ -0.13
SFXN1-210ENST00000513725 KIFC2Q96AC6 838 aa14.26□□□□□ -0.13
SFXN1-210ENST00000513725 CTAGE1Q96RT6 745 aa14.26□□□□□ -0.13
SFXN1-210ENST00000513725 NUP88Q99567 741 aaPredicted RBP14.26□□□□□ -0.13
SFXN1-210ENST00000513725 A1CFQ9NQ94 594 aaKnown RBP14.26□□□□□ -0.13
SFXN1-210ENST00000513725 PIH1D3Q9NQM4 214 aaKnown RBP14.26□□□□□ -0.13
SFXN1-210ENST00000513725 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.26□□□□□ -0.13
SFXN1-210ENST00000513725 DDX49Q9Y6V7 483 aaKnown RBP14.26□□□□□ -0.13
SFXN1-210ENST00000513725 MYO5AQ9Y4I1 1855 aaKnown RBP14.25□□□□□ -0.13
SFXN1-210ENST00000513725 IDH1O75874 414 aaKnown RBP14.25□□□□□ -0.13
SFXN1-210ENST00000513725 EVX2Q03828 476 aa14.25□□□□□ -0.13
SFXN1-210ENST00000513725 ZC3H14Q6PJT7 736 aaKnown RBP14.25□□□□□ -0.13
SFXN1-210ENST00000513725 WDR63Q8IWG1 891 aa14.25□□□□□ -0.13
SFXN1-210ENST00000513725 IL17RAQ96F46 866 aa14.25□□□□□ -0.13
SFXN1-210ENST00000513725 CDV3Q9UKY7 258 aaKnown RBP14.25□□□□□ -0.13
SFXN1-210ENST00000513725 R4GN57 208 aa14.25□□□□□ -0.13
SFXN1-210ENST00000513725 ASPMQ8IZT6 3477 aa14.25□□□□□ -0.13
SFXN1-210ENST00000513725 A6NJR5 290 aa14.24□□□□□ -0.13
SFXN1-210ENST00000513725 AOC1P19801 751 aa14.24□□□□□ -0.13
SFXN1-210ENST00000513725 NRIP1P48552 1158 aa14.24□□□□□ -0.13
SFXN1-210ENST00000513725 COL9A3Q14050 684 aaPredicted RBP14.24□□□□□ -0.13
SFXN1-210ENST00000513725 IFIH1Q9BYX4 1025 aaKnown RBP14.24□□□□□ -0.13
SFXN1-210ENST00000513725 NR2E1Q9Y466 385 aa14.24□□□□□ -0.13
SFXN1-210ENST00000513725 SOBPA7XYQ1 873 aa14.23□□□□□ -0.13
SFXN1-210ENST00000513725 NKRFO15226 690 aaKnown RBP eCLIP14.23□□□□□ -0.13
SFXN1-210ENST00000513725 GLP2RO95838 553 aa14.23□□□□□ -0.13
SFXN1-210ENST00000513725 ZAP70P43403 619 aa14.23□□□□□ -0.13
SFXN1-210ENST00000513725 MBTPS1Q14703 1052 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms