RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 CD99L2Q8TCZ2 262 aa8.46□□□□□ -1.06
RFC1-215ENST00000512881 ERO1AQ96HE7 468 aa8.46□□□□□ -1.06
RFC1-215ENST00000512881 RBSNQ9H1K0 784 aa8.46□□□□□ -1.06
RFC1-215ENST00000512881 ZFYVE28Q9HCC9 887 aa8.46□□□□□ -1.06
RFC1-215ENST00000512881 ABCF2Q9UG63 623 aa8.46□□□□□ -1.06
RFC1-215ENST00000512881 ZNF112Q9UJU3 913 aa8.46□□□□□ -1.06
RFC1-215ENST00000512881 FNDC3AQ9Y2H6 1198 aaKnown RBP8.46□□□□□ -1.06
RFC1-215ENST00000512881 TRIM17Q9Y577 477 aa8.46□□□□□ -1.06
RFC1-215ENST00000512881 HTTP42858 3142 aa8.46□□□□□ -1.06
RFC1-215ENST00000512881 A0A1B0GUL6 1792 aa8.45□□□□□ -1.06
RFC1-215ENST00000512881 DLL1O00548 723 aa8.45□□□□□ -1.06
RFC1-215ENST00000512881 ATP11AP98196 1134 aa8.45□□□□□ -1.06
RFC1-215ENST00000512881 ATP8B2P98198 1209 aa8.45□□□□□ -1.06
RFC1-215ENST00000512881 PPATQ06203 517 aa8.45□□□□□ -1.06
RFC1-215ENST00000512881 PPIL2Q13356 520 aa8.45□□□□□ -1.06
RFC1-215ENST00000512881 SNAPC2Q13487 334 aa8.45□□□□□ -1.06
RFC1-215ENST00000512881 TAF1CQ15572 869 aaPredicted RBP8.45□□□□□ -1.06
RFC1-215ENST00000512881 FOXD4L6Q3SYB3 417 aaPredicted RBP8.45□□□□□ -1.06
RFC1-215ENST00000512881 FOXD4L3Q6VB84 417 aaPredicted RBP8.45□□□□□ -1.06
RFC1-215ENST00000512881 ERICH6Q7L0X2 663 aa8.45□□□□□ -1.06
RFC1-215ENST00000512881 DZIP1Q86YF9 867 aaKnown RBP8.45□□□□□ -1.06
RFC1-215ENST00000512881 Q8N3U1 123 aa8.45□□□□□ -1.06
RFC1-215ENST00000512881 IDI2Q9BXS1 227 aa8.45□□□□□ -1.06
RFC1-215ENST00000512881 ABI2Q9NYB9 513 aaPredicted RBP8.45□□□□□ -1.06
RFC1-215ENST00000512881 HMG20BQ9P0W2 317 aa8.45□□□□□ -1.06
RFC1-215ENST00000512881 TMEM63CQ9P1W3 806 aa8.45□□□□□ -1.06
RFC1-215ENST00000512881 GAKO14976 1311 aa8.45□□□□□ -1.06
RFC1-215ENST00000512881 PDS5AQ29RF7 1337 aaKnown RBP8.45□□□□□ -1.06
RFC1-215ENST00000512881 BTBD19C9JJ37 291 aa8.44□□□□□ -1.06
RFC1-215ENST00000512881 ENTPD3O75355 529 aa8.44□□□□□ -1.06
RFC1-215ENST00000512881 WDHD1O75717 1129 aaPredicted RBP8.44□□□□□ -1.06
RFC1-215ENST00000512881 CYP2E1P05181 493 aaPredicted RBP8.44□□□□□ -1.06
RFC1-215ENST00000512881 NOS3P29474 1203 aa8.44□□□□□ -1.06
RFC1-215ENST00000512881 RGS3P49796 1198 aa8.44□□□□□ -1.06
RFC1-215ENST00000512881 CAP1Q01518 475 aa8.44□□□□□ -1.06
RFC1-215ENST00000512881 MECOMQ03112 1051 aa8.44□□□□□ -1.06
RFC1-215ENST00000512881 HYAL2Q12891 473 aa8.44□□□□□ -1.06
RFC1-215ENST00000512881 PDE12Q6L8Q7 609 aaKnown RBP8.44□□□□□ -1.06
RFC1-215ENST00000512881 IGF2-ASQ6U949 168 aa8.44□□□□□ -1.06
RFC1-215ENST00000512881 ADAMTSL4Q6UY14 1074 aa8.44□□□□□ -1.06
RFC1-215ENST00000512881 FTSJ3Q8IY81 847 aaKnown RBP8.44□□□□□ -1.06
RFC1-215ENST00000512881 IL22RA1Q8N6P7 574 aa8.44□□□□□ -1.06
RFC1-215ENST00000512881 SPATA5Q8NB90 893 aa8.44□□□□□ -1.06
RFC1-215ENST00000512881 PTPN22Q9Y2R2 807 aa8.44□□□□□ -1.06
RFC1-215ENST00000512881 RPAP1Q9BWH6 1393 aaPredicted RBP8.44□□□□□ -1.06
RFC1-215ENST00000512881 AKAP11Q9UKA4 1901 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 GPR75-ASB3A0A0A6YYF3 556 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 TLR2O60603 784 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 SURF6O75683 361 aaKnown RBP8.43□□□□□ -1.06
RFC1-215ENST00000512881 LDHCP07864 332 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 H2AFB1P0C5Y9 115 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 H2AFB2P0C5Z0 115 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 RLBP1P12271 317 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 BTDP43251 543 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 GSTO1P78417 241 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 SETDB1Q15047 1291 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 ARHGEF6Q15052 776 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 NOL9Q5SY16 702 aaKnown RBP8.43□□□□□ -1.06
RFC1-215ENST00000512881 PI16Q6UXB8 463 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 ZSCAN29Q8IWY8 852 aaPredicted RBP8.43□□□□□ -1.06
RFC1-215ENST00000512881 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.43□□□□□ -1.06
RFC1-215ENST00000512881 SSH3Q8TE77 659 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 ZNF384Q8TF68 577 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 WFDC12Q8WWY7 111 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 ZCCHC17Q9NP64 241 aaKnown RBP8.43□□□□□ -1.06
RFC1-215ENST00000512881 GPR108Q9NPR9 543 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 DDX4Q9NQI0 724 aaKnown RBP8.43□□□□□ -1.06
RFC1-215ENST00000512881 RAI14Q9P0K7 980 aa8.43□□□□□ -1.06
RFC1-215ENST00000512881 DDTLA6NHG4 134 aaPredicted RBP8.42□□□□□ -1.06
RFC1-215ENST00000512881 CXCL11O14625 94 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 UQCRFS1P1P0C7P4 283 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 MPSTP25325 297 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 MCAMP43121 646 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 RHBDL3P58872 404 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 OS9Q13438 667 aaPredicted RBP8.42□□□□□ -1.06
RFC1-215ENST00000512881 PICALMQ13492 652 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 MOGSQ13724 837 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 TNNI3KQ59H18 835 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 PRSS36Q5K4E3 855 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 TTC39BQ5VTQ0 682 aaPredicted RBP8.42□□□□□ -1.06
RFC1-215ENST00000512881 PHLDB3Q6NSJ2 640 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 ANKRD23Q86SG2 305 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 ITPRIPQ8IWB1 547 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 GTF3C2Q8WUA4 911 aaPredicted RBP8.42□□□□□ -1.06
RFC1-215ENST00000512881 EDEM1Q92611 657 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 NSUN4Q96CB9 384 aaKnown RBP8.42□□□□□ -1.06
RFC1-215ENST00000512881 MEGF10Q96KG7 1140 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 SRA1Q9HD15 236 aaKnown RBP8.42□□□□□ -1.06
RFC1-215ENST00000512881 FPGT-TNNI3KV9GXZ4 949 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 MROH7-TTC4A0A0A0MT08 1334 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 CENPFP49454 3210 aa8.42□□□□□ -1.06
RFC1-215ENST00000512881 ATRNL1Q5VV63 1379 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 CARNS1A5YM72 827 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 PDHXO00330 501 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 MAP4K4O95819 1239 aaPredicted RBP8.41□□□□□ -1.06
RFC1-215ENST00000512881 PDGFAP04085 211 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 PTPRAP18433 802 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 MTMR3Q13615 1198 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 CCDC158Q5M9N0 1113 aa8.41□□□□□ -1.06
RFC1-215ENST00000512881 TTC39AQ5SRH9 613 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms