RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 MYOCDQ8IZQ8 938 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 DCLK2Q8N568 766 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 EFHBQ8N7U6 833 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 SUSD6Q92537 303 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 CTAGE1Q96RT6 745 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 YME1L1Q96TA2 773 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 USP44Q9H0E7 712 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 PDGFCQ9NRA1 345 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 FBXO40Q9UH90 709 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 SORCS3Q9UPU3 1222 aa11.42□□□□□ -0.58
CLCN3-208ENST00000512813 HELZ2Q9BYK8 2649 aaKnown RBP11.41□□□□□ -0.58
CLCN3-208ENST00000512813 ASB14A6NK59 587 aa11.41□□□□□ -0.58
CLCN3-208ENST00000512813 BRD1O95696 1058 aa11.41□□□□□ -0.58
CLCN3-208ENST00000512813 MMP1P03956 469 aa11.41□□□□□ -0.58
CLCN3-208ENST00000512813 CTNNB1P35222 781 aa11.41□□□□□ -0.58
CLCN3-208ENST00000512813 PLCD1P51178 756 aa11.41□□□□□ -0.58
CLCN3-208ENST00000512813 PTGISQ16647 500 aa11.41□□□□□ -0.58
CLCN3-208ENST00000512813 CERS3Q8IU89 383 aa11.41□□□□□ -0.58
CLCN3-208ENST00000512813 PPP1R13LQ8WUF5 828 aa11.41□□□□□ -0.58
CLCN3-208ENST00000512813 PPP2R3CQ969Q6 453 aa11.41□□□□□ -0.58
CLCN3-208ENST00000512813 MFSD1Q9H3U5 465 aa11.41□□□□□ -0.58
CLCN3-208ENST00000512813 GPHNQ9NQX3 736 aaPredicted RBP11.41□□□□□ -0.58
CLCN3-208ENST00000512813 AKAP2Q9Y2D5 859 aa11.41□□□□□ -0.58
CLCN3-208ENST00000512813 IGSF3O75054 1194 aa11.4□□□□□ -0.58
CLCN3-208ENST00000512813 AOC1P19801 751 aa11.4□□□□□ -0.58
CLCN3-208ENST00000512813 CNTN2Q02246 1040 aa11.4□□□□□ -0.58
CLCN3-208ENST00000512813 DUSP28Q4G0W2 176 aa11.4□□□□□ -0.58
CLCN3-208ENST00000512813 DHX38Q92620 1227 aaKnown RBP11.4□□□□□ -0.58
CLCN3-208ENST00000512813 SLF1Q9BQI6 1058 aa11.4□□□□□ -0.58
CLCN3-208ENST00000512813 BARX2Q9UMQ3 279 aaPredicted RBP11.4□□□□□ -0.58
CLCN3-208ENST00000512813 R4GN57 208 aa11.4□□□□□ -0.58
CLCN3-208ENST00000512813 FANCMQ8IYD8 2048 aa11.4□□□□□ -0.59
CLCN3-208ENST00000512813 GLP2RO95838 553 aa11.39□□□□□ -0.59
CLCN3-208ENST00000512813 LINC00271P0C7V0 271 aa11.39□□□□□ -0.59
CLCN3-208ENST00000512813 CKBP12277 381 aa11.39□□□□□ -0.59
CLCN3-208ENST00000512813 COL9A3Q14050 684 aaPredicted RBP11.39□□□□□ -0.59
CLCN3-208ENST00000512813 FAM83BQ5T0W9 1011 aa11.39□□□□□ -0.59
CLCN3-208ENST00000512813 FBXO16Q8IX29 292 aaPredicted RBP11.39□□□□□ -0.59
CLCN3-208ENST00000512813 DTWD2Q8NBA8 298 aa11.39□□□□□ -0.59
CLCN3-208ENST00000512813 CHST13Q8NET6 341 aa11.39□□□□□ -0.59
CLCN3-208ENST00000512813 RTKNQ9BST9 563 aa11.39□□□□□ -0.59
CLCN3-208ENST00000512813 PCGF6Q9BYE7 350 aa11.39□□□□□ -0.59
CLCN3-208ENST00000512813 CDV3Q9UKY7 258 aaKnown RBP11.39□□□□□ -0.59
CLCN3-208ENST00000512813 PA2G4Q9UQ80 394 aaKnown RBP11.39□□□□□ -0.59
CLCN3-208ENST00000512813 RWDD3Q9Y3V2 267 aa11.39□□□□□ -0.59
CLCN3-208ENST00000512813 IGF2RP11717 2491 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 BPTFQ12830 3046 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 DCDC2BA2VCK2 349 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 PRR5-ARHGAP8B1AHC4 643 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 USP17L12C9JPN9 530 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 USP17L21D6R901 530 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 LGR5O75473 907 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 BMPR1AP36894 532 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 ARHGAP8P85298 464 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 CAMK1Q14012 370 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 MBTPS1Q14703 1052 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 ZC3H14Q6PJT7 736 aaKnown RBP11.38□□□□□ -0.59
CLCN3-208ENST00000512813 TRAF7Q6Q0C0 670 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 CRIPAKQ8N1N5 446 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 VTA1Q9NP79 307 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 COPRSQ9NQ92 184 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 MYH8P13535 1937 aa11.38□□□□□ -0.59
CLCN3-208ENST00000512813 MYO5AQ9Y4I1 1855 aaKnown RBP11.38□□□□□ -0.59
CLCN3-208ENST00000512813 PI15O43692 258 aa11.37□□□□□ -0.59
CLCN3-208ENST00000512813 KPNA6O60684 536 aa11.37□□□□□ -0.59
CLCN3-208ENST00000512813 UQCRFS1P1P0C7P4 283 aa11.37□□□□□ -0.59
CLCN3-208ENST00000512813 SLC4A3P48751 1232 aa11.37□□□□□ -0.59
CLCN3-208ENST00000512813 EXOSC9Q06265 439 aaKnown RBP11.37□□□□□ -0.59
CLCN3-208ENST00000512813 BRDTQ58F21 947 aaPredicted RBP11.37□□□□□ -0.59
CLCN3-208ENST00000512813 GORABQ5T7V8 394 aa11.37□□□□□ -0.59
CLCN3-208ENST00000512813 KIAA1211Q6ZU35 1233 aa11.37□□□□□ -0.59
CLCN3-208ENST00000512813 ADGRD2Q7Z7M1 963 aa11.37□□□□□ -0.59
CLCN3-208ENST00000512813 SESTD1Q86VW0 696 aa11.37□□□□□ -0.59
CLCN3-208ENST00000512813 WWC1Q8IX03 1113 aa11.37□□□□□ -0.59
CLCN3-208ENST00000512813 CPXCR1Q8N123 301 aa11.37□□□□□ -0.59
CLCN3-208ENST00000512813 GPR161Q8N6U8 529 aaKnown RBP11.37□□□□□ -0.59
CLCN3-208ENST00000512813 TOP1MTQ969P6 601 aa11.37□□□□□ -0.59
CLCN3-208ENST00000512813 RTP3Q9BQQ7 232 aa11.37□□□□□ -0.59
CLCN3-208ENST00000512813 GOPCQ9HD26 462 aa11.37□□□□□ -0.59
CLCN3-208ENST00000512813 DDX49Q9Y6V7 483 aaKnown RBP11.37□□□□□ -0.59
CLCN3-208ENST00000512813 EMSYQ7Z589 1322 aa11.36□□□□□ -0.59
CLCN3-208ENST00000512813 CSPG5O95196 566 aa11.36□□□□□ -0.59
CLCN3-208ENST00000512813 LMNB2Q03252 620 aa11.36□□□□□ -0.59
CLCN3-208ENST00000512813 TFCP2Q12800 502 aa11.36□□□□□ -0.59
CLCN3-208ENST00000512813 GDF6Q6KF10 455 aaPredicted RBP11.36□□□□□ -0.59
CLCN3-208ENST00000512813 EEPD1Q7L9B9 569 aa11.36□□□□□ -0.59
CLCN3-208ENST00000512813 FIBCD1Q8N539 461 aa11.36□□□□□ -0.59
CLCN3-208ENST00000512813 SUMF1Q8NBK3 374 aa11.36□□□□□ -0.59
CLCN3-208ENST00000512813 FLCNQ8NFG4 579 aa11.36□□□□□ -0.59
CLCN3-208ENST00000512813 DBF4BQ8NFT6 615 aa11.36□□□□□ -0.59
CLCN3-208ENST00000512813 NEUROD6Q96NK8 337 aa11.36□□□□□ -0.59
CLCN3-208ENST00000512813 SMOC2Q9H3U7 446 aa11.36□□□□□ -0.59
CLCN3-208ENST00000512813 RAD50Q92878 1312 aa11.35□□□□□ -0.59
CLCN3-208ENST00000512813 POLR3DP05423 398 aaPredicted RBP11.35□□□□□ -0.59
CLCN3-208ENST00000512813 ARP10275 920 aa11.35□□□□□ -0.59
CLCN3-208ENST00000512813 AKR1B1P15121 316 aa11.35□□□□□ -0.59
CLCN3-208ENST00000512813 CYP7A1P22680 504 aa11.35□□□□□ -0.59
CLCN3-208ENST00000512813 NRIP1P48552 1158 aa11.35□□□□□ -0.59
CLCN3-208ENST00000512813 OAZ1P54368 228 aa11.35□□□□□ -0.59
CLCN3-208ENST00000512813 EVX2Q03828 476 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms