RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 LETM2Q2VYF4 491 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 RNF207Q6ZRF8 634 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 JMYQ8N9B5 988 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 ZNF579Q8NAF0 562 aaKnown RBP11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 MTMR9Q96QG7 549 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 TMEM60Q9H2L4 133 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 ACAD9Q9H845 621 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 HOMER2Q9NSB8 354 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 MORF4L1Q9UBU8 362 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 MRVI1Q9Y6F6 885 aa11.36□□□□□ -0.59
PDGFRA-209ENST00000512143 ADGRA2Q96PE1 1338 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 IGF2BP3O00425 579 aaKnown RBP eCLIP11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 LAD1O00515 517 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 CCNT1O60563 726 aaKnown RBP11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 CUTAO60888 179 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 TDP2O95551 362 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 SLC25A27O95847 323 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 MBD3O95983 291 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 GCFC2P16383 781 aaKnown RBP11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 CMA1P23946 247 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 MCM7P33993 719 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 COPB2P35606 906 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 PRPHP41219 470 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 TM4SF4P48230 202 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 GCLCP48506 637 aaPredicted RBP11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 BAATQ14032 418 aaPredicted RBP11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 ARL6IP4Q66PJ3 421 aaKnown RBP11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 SLC30A10Q6XR72 485 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 FCHSD1Q86WN1 690 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 KRI1Q8N9T8 703 aaKnown RBP11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 SHCBP1Q8NEM2 672 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 FERMT2Q96AC1 680 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 LENG9Q96B70 501 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 NAP1L4Q99733 375 aaKnown RBP11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 R3HDMLQ9H3Y0 253 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 A1CFQ9NQ94 594 aaKnown RBP11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 CYP39A1Q9NYL5 469 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 FBXO40Q9UH90 709 aa11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 ABT1Q9ULW3 272 aaKnown RBP11.35□□□□□ -0.59
PDGFRA-209ENST00000512143 RASSF10A6NK89 507 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 SLC37A4O43826 429 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 APLP1P51693 650 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 ERVK-9P63128 1117 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 ERVK-24P63145 666 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 GRIN1Q05586 938 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 PLS1Q14651 629 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 Q4G0T1 1027 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 SHC4Q6S5L8 630 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 IFNL1Q8IU54 200 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 ENGASEQ8NFI3 743 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 GPRC5AQ8NFJ5 357 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 CLIC6Q96NY7 704 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 TAAR1Q96RJ0 339 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 PARK7Q99497 189 aaKnown RBP11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 PAGR1Q9BTK6 254 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 CREBZFQ9NS37 354 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 HPSEQ9Y251 543 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 DDX49Q9Y6V7 483 aaKnown RBP11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 LCTP09848 1927 aa11.34□□□□□ -0.59
PDGFRA-209ENST00000512143 IGLV3-22A0A075B6J6 115 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 FAM86B1E9PN63 330 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 NEMFO60524 1076 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 FAM86B2P0C5J1 330 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 OR52Z1P0C646 297 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 LIG1P18858 919 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 ERCC3P19447 782 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 SNW1Q13573 536 aaKnown RBP11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 RESP18Q5W5W9 173 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 NSMFQ6X4W1 530 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 SMCR8Q8TEV9 937 aaPredicted RBP11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 HAS1Q92839 578 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 PURBQ96QR8 312 aaKnown RBP11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 ZIC5Q96T25 663 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 GOLPH3LQ9H4A5 285 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 MROH8Q9H579 483 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 EHMT1Q9H9B1 1298 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 KCNMB3Q9NPA1 279 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 PFASO15067 1338 aa11.33□□□□□ -0.6
PDGFRA-209ENST00000512143 DNAJC25-GNG10A0A024R161 153 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 GOLGA6L4A6NEF3 574 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 MEIS1O00470 390 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 TBX3O15119 743 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 BCRP11274 1271 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 MRPS9P82933 396 aaKnown RBP11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 SREBF2Q12772 1141 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 FAM110CQ1W6H9 321 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 PCNX4Q63HM2 1172 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 CYP4F22Q6NT55 531 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 XRRA1Q6P2D8 792 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 NIPA1Q7RTP0 329 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 VSIG10LQ86VR7 867 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 NCAPG2Q86XI2 1143 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 CCAR1Q8IX12 1150 aaKnown RBP11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 FMR1NBQ8N0W7 255 aaPredicted RBP11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 ANKRD13CQ8N6S4 541 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 FAM133AQ8N9E0 248 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 FSIP1Q8NA03 581 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 IL31RAQ8NI17 732 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 CYP2W1Q8TAV3 490 aa11.32□□□□□ -0.6
PDGFRA-209ENST00000512143 ETNPPLQ8TBG4 499 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms