RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 SNX14Q9Y5W7 946 aa19.11■□□□□ 0.65
DDX41-213ENST00000512027 SZT2Q5T011 3432 aa19.1■□□□□ 0.65
DDX41-213ENST00000512027 LAMA3Q16787 3333 aa19.1■□□□□ 0.65
DDX41-213ENST00000512027 TRIM43BA6NCK2 446 aa19.1■□□□□ 0.65
DDX41-213ENST00000512027 HSPA4P34932 840 aa19.1■□□□□ 0.65
DDX41-213ENST00000512027 C1orf53Q5VUE5 145 aa19.1■□□□□ 0.65
DDX41-213ENST00000512027 ARHGEF16Q5VV41 709 aa19.1■□□□□ 0.65
DDX41-213ENST00000512027 APOA5Q6Q788 366 aa19.1■□□□□ 0.65
DDX41-213ENST00000512027 DHX32Q7L7V1 743 aaKnown RBP19.1■□□□□ 0.65
DDX41-213ENST00000512027 SGMS1Q86VZ5 419 aa19.1■□□□□ 0.65
DDX41-213ENST00000512027 TMTC2Q8N394 836 aa19.1■□□□□ 0.65
DDX41-213ENST00000512027 NSUN6Q8TEA1 469 aaKnown RBP19.1■□□□□ 0.65
DDX41-213ENST00000512027 TRIM43Q96BQ3 446 aaPredicted RBP19.1■□□□□ 0.65
DDX41-213ENST00000512027 ZFP91Q96JP5 570 aaPredicted RBP19.1■□□□□ 0.65
DDX41-213ENST00000512027 GLT1D1Q96MS3 346 aa19.1■□□□□ 0.65
DDX41-213ENST00000512027 JAKMIP1Q96N16 626 aaKnown RBP19.1■□□□□ 0.65
DDX41-213ENST00000512027 MPHOSPH6Q99547 160 aaKnown RBP19.1■□□□□ 0.65
DDX41-213ENST00000512027 PXMP2Q9NR77 195 aa19.1■□□□□ 0.65
DDX41-213ENST00000512027 NKX3-2P78367 333 aa19.09■□□□□ 0.65
DDX41-213ENST00000512027 GHRHRQ02643 423 aa19.09■□□□□ 0.65
DDX41-213ENST00000512027 PPP2R5BQ15173 497 aa19.09■□□□□ 0.65
DDX41-213ENST00000512027 SEPT14Q6ZU15 432 aa19.09■□□□□ 0.65
DDX41-213ENST00000512027 OR6J1Q8NGC5 347 aa19.09■□□□□ 0.65
DDX41-213ENST00000512027 IL31RAQ8NI17 732 aa19.09■□□□□ 0.65
DDX41-213ENST00000512027 KCNB2Q92953 911 aa19.09■□□□□ 0.65
DDX41-213ENST00000512027 RRP36Q96EU6 259 aaKnown RBP19.09■□□□□ 0.65
DDX41-213ENST00000512027 PRKAG2Q9UGJ0 569 aa19.09■□□□□ 0.65
DDX41-213ENST00000512027 CLTBP09497 229 aa19.08■□□□□ 0.64
DDX41-213ENST00000512027 CALM1P0DP23 149 aa19.08■□□□□ 0.64
DDX41-213ENST00000512027 CALM2P0DP24 149 aa19.08■□□□□ 0.64
DDX41-213ENST00000512027 CALM3P0DP25 149 aa19.08■□□□□ 0.64
DDX41-213ENST00000512027 TXNP10599 105 aaKnown RBP19.08■□□□□ 0.64
DDX41-213ENST00000512027 ITGB8P26012 769 aa19.08■□□□□ 0.64
DDX41-213ENST00000512027 PSMC6P62333 389 aa19.08■□□□□ 0.64
DDX41-213ENST00000512027 KRT32Q14532 448 aa19.08■□□□□ 0.64
DDX41-213ENST00000512027 ERICH6BQ5W0A0 696 aa19.08■□□□□ 0.64
DDX41-213ENST00000512027 TMTC3Q6ZXV5 915 aa19.08■□□□□ 0.64
DDX41-213ENST00000512027 FCHSD1Q86WN1 690 aa19.08■□□□□ 0.64
DDX41-213ENST00000512027 FANCBQ8NB91 859 aa19.08■□□□□ 0.64
DDX41-213ENST00000512027 SCFD2Q8WU76 684 aa19.08■□□□□ 0.64
DDX41-213ENST00000512027 UBE2OQ9C0C9 1292 aaKnown RBP19.08■□□□□ 0.64
DDX41-213ENST00000512027 MYH7BA7E2Y1 1941 aa19.08■□□□□ 0.64
DDX41-213ENST00000512027 ELP1O95163 1332 aa19.07■□□□□ 0.64
DDX41-213ENST00000512027 KLF18A0A0U1RQI7 1052 aa19.07■□□□□ 0.64
DDX41-213ENST00000512027 B4DLN1 442 aa19.07■□□□□ 0.64
DDX41-213ENST00000512027 NR3C2P08235 984 aa19.07■□□□□ 0.64
DDX41-213ENST00000512027 MYCLP12524 364 aaPredicted RBP19.07■□□□□ 0.64
DDX41-213ENST00000512027 BMP8BP34820 402 aa19.07■□□□□ 0.64
DDX41-213ENST00000512027 MRPL12P52815 198 aaKnown RBP19.07■□□□□ 0.64
DDX41-213ENST00000512027 STXBP2Q15833 593 aa19.07■□□□□ 0.64
DDX41-213ENST00000512027 LY6KQ17RY6 165 aa19.07■□□□□ 0.64
DDX41-213ENST00000512027 PPP1R13LQ8WUF5 828 aa19.07■□□□□ 0.64
DDX41-213ENST00000512027 BADQ92934 168 aa19.07■□□□□ 0.64
DDX41-213ENST00000512027 PDCD2LQ9BRP1 358 aa19.07■□□□□ 0.64
DDX41-213ENST00000512027 MAF1Q9H063 256 aa19.07■□□□□ 0.64
DDX41-213ENST00000512027 SEC63Q9UGP8 760 aaKnown RBP19.07■□□□□ 0.64
DDX41-213ENST00000512027 Q9Y3F1 56 aa19.07■□□□□ 0.64
DDX41-213ENST00000512027 GRIN2DO15399 1336 aa19.06■□□□□ 0.64
DDX41-213ENST00000512027 DOCK5Q9H7D0 1870 aa19.06■□□□□ 0.64
DDX41-213ENST00000512027 A0A0U1RQG5 324 aaPredicted RBP19.06■□□□□ 0.64
DDX41-213ENST00000512027 GCOM1H8Y6P7 765 aaPredicted RBP19.06■□□□□ 0.64
DDX41-213ENST00000512027 SOX1O00570 391 aaPredicted RBP19.06■□□□□ 0.64
DDX41-213ENST00000512027 REC8O95072 547 aa19.06■□□□□ 0.64
DDX41-213ENST00000512027 SLC34A2O95436 690 aa19.06■□□□□ 0.64
DDX41-213ENST00000512027 POLR2MP0CAP2 368 aa19.06■□□□□ 0.64
DDX41-213ENST00000512027 GNAQP50148 359 aa19.06■□□□□ 0.64
DDX41-213ENST00000512027 FAAP100Q0VG06 881 aa19.06■□□□□ 0.64
DDX41-213ENST00000512027 Q6ZUG5 572 aa19.06■□□□□ 0.64
DDX41-213ENST00000512027 IWS1Q96ST2 819 aa19.06■□□□□ 0.64
DDX41-213ENST00000512027 LBHD1Q9BQE6 289 aaPredicted RBP19.06■□□□□ 0.64
DDX41-213ENST00000512027 LZTS2Q9BRK4 669 aa19.06■□□□□ 0.64
DDX41-213ENST00000512027 NAP1L2Q9ULW6 460 aaPredicted RBP19.06■□□□□ 0.64
DDX41-213ENST00000512027 CNTNAP5Q8WYK1 1306 aa19.05■□□□□ 0.64
DDX41-213ENST00000512027 GOLGA8AA7E2F4 631 aa19.05■□□□□ 0.64
DDX41-213ENST00000512027 GOLGA8BA8MQT2 603 aa19.05■□□□□ 0.64
DDX41-213ENST00000512027 ARVCFO00192 962 aa19.05■□□□□ 0.64
DDX41-213ENST00000512027 ZBTB43O43298 467 aa19.05■□□□□ 0.64
DDX41-213ENST00000512027 MYL3P08590 195 aa19.05■□□□□ 0.64
DDX41-213ENST00000512027 SMARCA1P28370 1054 aa19.05■□□□□ 0.64
DDX41-213ENST00000512027 CDK7P50613 346 aa19.05■□□□□ 0.64
DDX41-213ENST00000512027 APOBRQ0VD83 1088 aa19.05■□□□□ 0.64
DDX41-213ENST00000512027 TTLL4Q14679 1199 aa19.05■□□□□ 0.64
DDX41-213ENST00000512027 PGM5Q15124 567 aa19.05■□□□□ 0.64
DDX41-213ENST00000512027 CCDC62Q6P9F0 684 aa19.05■□□□□ 0.64
DDX41-213ENST00000512027 USP17L6PQ6QN14 398 aa19.05■□□□□ 0.64
DDX41-213ENST00000512027 SYNE3Q6ZMZ3 975 aa19.05■□□□□ 0.64
DDX41-213ENST00000512027 ANKRD33Q7Z3H0 272 aa19.05■□□□□ 0.64
DDX41-213ENST00000512027 GPKOWQ92917 476 aaPredicted RBP eCLIP19.05■□□□□ 0.64
DDX41-213ENST00000512027 DCDC2CA8MYV0 355 aa19.04■□□□□ 0.64
DDX41-213ENST00000512027 SORBS3O60504 671 aa19.04■□□□□ 0.64
DDX41-213ENST00000512027 RGS20O76081 388 aa19.04■□□□□ 0.64
DDX41-213ENST00000512027 CDC27P30260 824 aa19.04■□□□□ 0.64
DDX41-213ENST00000512027 FGD1P98174 961 aa19.04■□□□□ 0.64
DDX41-213ENST00000512027 TRAF1Q13077 416 aa19.04■□□□□ 0.64
DDX41-213ENST00000512027 RTN1Q16799 776 aa19.04■□□□□ 0.64
DDX41-213ENST00000512027 BLOC1S2Q6QNY1 142 aa19.04■□□□□ 0.64
DDX41-213ENST00000512027 TDHQ8IZJ6 230 aa19.04■□□□□ 0.64
DDX41-213ENST00000512027 BRF1Q92994 677 aa19.04■□□□□ 0.64
DDX41-213ENST00000512027 TMEM39AQ9NV64 488 aa19.04■□□□□ 0.64
DDX41-213ENST00000512027 LAMA2P24043 3122 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms