RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 OSGEPQ9NPF4 335 aa8.54□□□□□ -1.04
NR1I3-229ENST00000511748 IFT57Q9NWB7 429 aa8.54□□□□□ -1.04
NR1I3-229ENST00000511748 NR2E3Q9Y5X4 410 aa8.54□□□□□ -1.04
NR1I3-229ENST00000511748 RANBP2P49792 3224 aaKnown RBP8.54□□□□□ -1.04
NR1I3-229ENST00000511748 HOXD10P28358 340 aa8.53□□□□□ -1.04
NR1I3-229ENST00000511748 TNNI2P48788 182 aa8.53□□□□□ -1.04
NR1I3-229ENST00000511748 NLRP12P59046 1061 aa8.53□□□□□ -1.04
NR1I3-229ENST00000511748 C19orf57Q0VDD7 668 aa8.53□□□□□ -1.04
NR1I3-229ENST00000511748 ADGRE1Q14246 886 aa8.53□□□□□ -1.04
NR1I3-229ENST00000511748 MBTPS1Q14703 1052 aa8.53□□□□□ -1.04
NR1I3-229ENST00000511748 SUZ12Q15022 739 aaKnown RBP8.53□□□□□ -1.04
NR1I3-229ENST00000511748 WDR43Q15061 677 aaKnown RBP eCLIP8.53□□□□□ -1.04
NR1I3-229ENST00000511748 TAF1CQ15572 869 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-229ENST00000511748 KRT24Q2M2I5 525 aa8.53□□□□□ -1.04
NR1I3-229ENST00000511748 KSR2Q6VAB6 950 aa8.53□□□□□ -1.04
NR1I3-229ENST00000511748 DTHD1Q6ZMT9 781 aa8.53□□□□□ -1.04
NR1I3-229ENST00000511748 ZNF804AQ7Z570 1209 aa8.53□□□□□ -1.04
NR1I3-229ENST00000511748 PLA2G12BQ9BX93 195 aa8.53□□□□□ -1.04
NR1I3-229ENST00000511748 NRSN2Q9GZP1 204 aa8.53□□□□□ -1.04
NR1I3-229ENST00000511748 CD209Q9NNX6 404 aa8.53□□□□□ -1.04
NR1I3-229ENST00000511748 SCAF8Q9UPN6 1271 aaKnown RBP8.53□□□□□ -1.04
NR1I3-229ENST00000511748 CSADQ9Y600 493 aa8.53□□□□□ -1.04
NR1I3-229ENST00000511748 SZT2Q5T011 3432 aa8.53□□□□□ -1.04
NR1I3-229ENST00000511748 C9orf172C9J069 976 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 H0YGN5 161 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 DLGAP3O95886 979 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 B3GALT4O96024 378 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 PROCP04070 461 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 CTSBP07858 339 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 CETPP11597 493 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 IL1R1P14778 569 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 KIAA1211Q6ZU35 1233 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 AGGF1Q8N302 714 aaeCLIP8.52□□□□□ -1.05
NR1I3-229ENST00000511748 OPTNQ96CV9 577 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 CLMNQ96JQ2 1002 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 TRIM56Q9BRZ2 755 aaKnown RBP8.52□□□□□ -1.05
NR1I3-229ENST00000511748 MYH16Q9H6N6 1097 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 GREM2Q9H772 168 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 AKAP2Q9Y2D5 859 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 A0A0C4DFX4 3053 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 SSC5DA1L4H1 1573 aa8.52□□□□□ -1.05
NR1I3-229ENST00000511748 CCL15-CCL14A0A0B4J2E2 113 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 TLR2O60603 784 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 USP2O75604 605 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-229ENST00000511748 ECEL1O95672 775 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 ZNF853P0CG23 659 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 NOS3P29474 1203 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 DAB2P98082 770 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 GSTM4Q03013 218 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 RASA3Q14644 834 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 CCL15Q16663 113 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 CFAP100Q494V2 611 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 SLC17A8Q8NDX2 589 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 GIPC2Q8TF65 315 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 ZNF428Q96B54 188 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 PTPN18Q99952 460 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 MXD3Q9BW11 206 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 STK31Q9BXU1 1019 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 SOX17Q9H6I2 414 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-229ENST00000511748 PHAXQ9H814 394 aaKnown RBP8.51□□□□□ -1.05
NR1I3-229ENST00000511748 VEZTQ9HBM0 779 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 MAP3K2Q9Y2U5 619 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 PTCH2Q9Y6C5 1203 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 AK5Q9Y6K8 562 aa8.51□□□□□ -1.05
NR1I3-229ENST00000511748 ANKRD18BA2A2Z9 1011 aa8.5□□□□□ -1.05
NR1I3-229ENST00000511748 F8W735 103 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-229ENST00000511748 GIPC1O14908 333 aa8.5□□□□□ -1.05
NR1I3-229ENST00000511748 FBXO24O75426 580 aa8.5□□□□□ -1.05
NR1I3-229ENST00000511748 USP17L7P0C7H9 530 aa8.5□□□□□ -1.05
NR1I3-229ENST00000511748 LACTBP83111 547 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-229ENST00000511748 RPS26P11Q5JNZ5 115 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-229ENST00000511748 NBPF12Q5TAG4 269 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-229ENST00000511748 GPAT2Q6NUI2 795 aa8.5□□□□□ -1.05
NR1I3-229ENST00000511748 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.5□□□□□ -1.05
NR1I3-229ENST00000511748 TXNRD3Q86VQ6 643 aa8.5□□□□□ -1.05
NR1I3-229ENST00000511748 RGS22Q8NE09 1264 aa8.5□□□□□ -1.05
NR1I3-229ENST00000511748 WFDC12Q8WWY7 111 aa8.5□□□□□ -1.05
NR1I3-229ENST00000511748 DPF3Q92784 378 aa8.5□□□□□ -1.05
NR1I3-229ENST00000511748 NACC1Q96RE7 527 aa8.5□□□□□ -1.05
NR1I3-229ENST00000511748 MYBBP1AQ9BQG0 1328 aaKnown RBP8.5□□□□□ -1.05
NR1I3-229ENST00000511748 SPEF2Q9C093 1822 aa8.5□□□□□ -1.05
NR1I3-229ENST00000511748 PI4KAP2A4QPH2 592 aa8.49□□□□□ -1.05
NR1I3-229ENST00000511748 CSF1RP07333 972 aa8.49□□□□□ -1.05
NR1I3-229ENST00000511748 GJB1P08034 283 aa8.49□□□□□ -1.05
NR1I3-229ENST00000511748 CTSHP09668 335 aa8.49□□□□□ -1.05
NR1I3-229ENST00000511748 GJA8P48165 433 aa8.49□□□□□ -1.05
NR1I3-229ENST00000511748 RBM5P52756 815 aaKnown RBP eCLIP8.49□□□□□ -1.05
NR1I3-229ENST00000511748 UBXN2AP68543 259 aa8.49□□□□□ -1.05
NR1I3-229ENST00000511748 HDLBPQ00341 1268 aaKnown RBP8.49□□□□□ -1.05
NR1I3-229ENST00000511748 CHRNDQ07001 517 aa8.49□□□□□ -1.05
NR1I3-229ENST00000511748 SNAPC2Q13487 334 aa8.49□□□□□ -1.05
NR1I3-229ENST00000511748 UBE3BQ7Z3V4 1068 aa8.49□□□□□ -1.05
NR1I3-229ENST00000511748 ERO1BQ86YB8 467 aa8.49□□□□□ -1.05
NR1I3-229ENST00000511748 TMEM130Q8N3G9 435 aa8.49□□□□□ -1.05
NR1I3-229ENST00000511748 PI4KAP1Q8N8J0 262 aa8.49□□□□□ -1.05
NR1I3-229ENST00000511748 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.49□□□□□ -1.05
NR1I3-229ENST00000511748 STK35Q8TDR2 534 aa8.49□□□□□ -1.05
NR1I3-229ENST00000511748 BRI3BPQ8WY22 251 aa8.49□□□□□ -1.05
NR1I3-229ENST00000511748 SPOCK3Q9BQ16 436 aa8.49□□□□□ -1.05
NR1I3-229ENST00000511748 SRCIN1Q9C0H9 1055 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms