RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 SMCO2A6NFE2 343 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 PIK3CDO00329 1044 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 CUTAO60888 179 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 FOSP01100 380 aaPredicted RBP10.37□□□□□ -0.75
NR1I3-228ENST00000511676 GCFC2P16383 781 aaKnown RBP10.37□□□□□ -0.75
NR1I3-228ENST00000511676 PRPHP41219 470 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 RGS2P41220 211 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 ME1P48163 572 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 CLK2P49760 499 aaKnown RBP10.37□□□□□ -0.75
NR1I3-228ENST00000511676 OAZ1P54368 228 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 ZNF445P59923 1031 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 GHRHRQ02643 423 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 IKQ13123 557 aaPredicted RBP10.37□□□□□ -0.75
NR1I3-228ENST00000511676 NONOQ15233 471 aaKnown RBP eCLIP10.37□□□□□ -0.75
NR1I3-228ENST00000511676 SF3A1Q15459 793 aaKnown RBP10.37□□□□□ -0.75
NR1I3-228ENST00000511676 QRICH1Q2TAL8 776 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 CCDC183Q5T5S1 534 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 TTBK2Q6IQ55 1244 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 TYW1BQ6NUM6 668 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 CCDC73Q6ZRK6 1079 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 RASGRP2Q7LDG7 609 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 UBE2Q1Q7Z7E8 422 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 FBXO11Q86XK2 927 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 HOMER1Q86YM7 354 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 KRI1Q8N9T8 703 aaKnown RBP10.37□□□□□ -0.75
NR1I3-228ENST00000511676 OXER1Q8TDS5 423 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 CRISPLD2Q9H0B8 497 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 GDPD2Q9HCC8 539 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 PRR12Q9ULL5 1215 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 PCDHA6Q9UN73 950 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 MTMR7Q9Y216 660 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 PCDHA8Q9Y5H6 950 aa10.37□□□□□ -0.75
NR1I3-228ENST00000511676 ABCB11O95342 1321 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 CTAGE5O15320 804 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 PTPREP23469 700 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 CMA1P23946 247 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 TOB1P50616 345 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-228ENST00000511676 ATP2C1P98194 919 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-228ENST00000511676 FAM160A1Q05DH4 1040 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 MOGSQ13724 837 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 FOXD4L6Q3SYB3 417 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-228ENST00000511676 TTC38Q5R3I4 469 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 MFSD14CQ5VZR4 134 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 MOXD1Q6UVY6 613 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 FOXD4L3Q6VB84 417 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-228ENST00000511676 ELOA2Q8IYF1 753 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-228ENST00000511676 MRPS27Q92552 414 aaKnown RBP10.36□□□□□ -0.75
NR1I3-228ENST00000511676 LBHD1Q9BQE6 289 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-228ENST00000511676 SLF1Q9BQI6 1058 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 PYM1Q9BRP8 204 aaKnown RBP10.36□□□□□ -0.75
NR1I3-228ENST00000511676 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.36□□□□□ -0.75
NR1I3-228ENST00000511676 UNC93B1Q9H1C4 597 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 PSTPIP2Q9H939 334 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 MORF4L1Q9UBU8 362 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 PCDHA1Q9Y5I3 950 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 SRPRBQ9Y5M8 271 aaKnown RBP10.36□□□□□ -0.75
NR1I3-228ENST00000511676 CLIC4Q9Y696 253 aa10.36□□□□□ -0.75
NR1I3-228ENST00000511676 ATP2A1O14983 1001 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 STRNO43815 780 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 RAD21O60216 631 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 PPP1R11O60927 126 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-228ENST00000511676 GADD45BO75293 160 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-228ENST00000511676 VCAM1P19320 739 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 SLC16A2P36021 539 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 MTMR2Q13614 643 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 GSE1Q14687 1217 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 AXDND1Q5T1B0 1012 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-228ENST00000511676 PPP4R3AQ6IN85 833 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 CAVIN1Q6NZI2 390 aaKnown RBP10.35□□□□□ -0.75
NR1I3-228ENST00000511676 NEK8Q86SG6 692 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 CHAMP1Q96JM3 812 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 PGBD1Q96JS3 809 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 TIGD1Q96MW7 591 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 C11orf49Q9H6J7 331 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 VAT1LQ9HCJ6 419 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 HOXC10Q9NYD6 342 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 PPP1R9AQ9ULJ8 1098 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 PCDHA7Q9UN72 937 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 MRPL11Q9Y3B7 192 aaKnown RBP10.35□□□□□ -0.75
NR1I3-228ENST00000511676 RABGAP1Q9Y3P9 1069 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 CENPFP49454 3210 aa10.35□□□□□ -0.75
NR1I3-228ENST00000511676 OTOFQ9HC10 1997 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 USP17L15C9J2P7 530 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 USP17L13C9JLJ4 530 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 USP17L11C9JVI0 530 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 USP17L18D6R9N7 530 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 USP17L22D6RA61 530 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 USP17L17D6RBQ6 530 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 USP17L19D6RCP7 530 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 USP17L20D6RJB6 530 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 ICAM1P05362 532 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 USP11P51784 963 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 HMGCS2P54868 508 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 USP17L24Q0WX57 530 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 TKFCQ3LXA3 575 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 LRIT3Q3SXY7 679 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 KIAA1755Q5JYT7 1200 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 RESP18Q5W5W9 173 aa10.34□□□□□ -0.75
NR1I3-228ENST00000511676 RBM43Q6ZSC3 357 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms