RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 TRAPPC11Q7Z392 1133 aa15.87■□□□□ 0.13
AP003555.1-202ENST00000511013 SP8Q8IXZ3 490 aa15.87■□□□□ 0.13
AP003555.1-202ENST00000511013 LARP4BQ92615 738 aaKnown RBP15.87■□□□□ 0.13
AP003555.1-202ENST00000511013 TSGA10Q9BZW7 698 aa15.87■□□□□ 0.13
AP003555.1-202ENST00000511013 COA1Q9GZY4 146 aa15.87■□□□□ 0.13
AP003555.1-202ENST00000511013 NHEJ1Q9H9Q4 299 aaPredicted RBP15.87■□□□□ 0.13
AP003555.1-202ENST00000511013 RIC8AQ9NPQ8 531 aa15.87■□□□□ 0.13
AP003555.1-202ENST00000511013 BLOC1S4Q9NUP1 217 aa15.87■□□□□ 0.13
AP003555.1-202ENST00000511013 UBR3Q6ZT12 1888 aa15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 FRMPD2Q68DX3 1309 aaPredicted RBP15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 EIF3JO75822 258 aaKnown RBP15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 TTLL1O95922 423 aa15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 MCM3P25205 808 aa15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 OAS2P29728 719 aaKnown RBP15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 MRPL12P52815 198 aaKnown RBP15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 GTF2IP78347 998 aa15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 LRRC63Q05C16 580 aa15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 CKAP4Q07065 602 aaKnown RBP15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 BEND6Q5SZJ8 279 aaPredicted RBP15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 PAPD7Q5XG87 772 aaKnown RBP15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 CCDC84Q86UT8 332 aaPredicted RBP15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 KIAA0895Q8NCT3 520 aa15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 RAD54LQ92698 747 aa15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 COA7Q96BR5 231 aa15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 PNMA5Q96PV4 448 aa15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 SEMA6BQ9H3T3 888 aa15.86■□□□□ 0.13
AP003555.1-202ENST00000511013 MYMKA6NI61 221 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 RASSF10A6NK89 507 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 POLR3GO15318 223 aaPredicted RBP15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 GCFC2P16383 781 aaKnown RBP15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 CYP2C19P33261 490 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 ZNF543Q08ER8 600 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 MCM6Q14566 821 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 VWA3BQ502W6 1294 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 GPATCH4Q5T3I0 446 aaKnown RBP15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 DPP8Q6V1X1 898 aaPredicted RBP15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 TSG101Q99816 390 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 GLT8D2Q9H1C3 349 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 SLC39A2Q9NP94 309 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 GPCPD1Q9NPB8 672 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 AGPAT5Q9NUQ2 364 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 SAR1BQ9Y6B6 198 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 SPATA31A6Q5VVP1 1343 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 ANO9A1A5B4 782 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 KLRG2A4D1S0 409 aaPredicted RBP15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 SLC26A4O43511 780 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 AKR1B1P15121 316 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 HNRNPH3P31942 346 aaKnown RBP15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 SPA17Q15506 151 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 MAN2A1Q16706 1144 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 WDR93Q6P2C0 686 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 LRRC47Q8N1G4 583 aaKnown RBP15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 SNX29Q8TEQ0 813 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 CUL5Q93034 780 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 CCDC42Q96M95 316 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 PNKPQ96T60 521 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 LRRC4BQ9NT99 713 aa15.85■□□□□ 0.13
AP003555.1-202ENST00000511013 USO1O60763 962 aaKnown RBP15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 TDP2O95551 362 aa15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 RHOXF2BP0C7M4 288 aa15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 HMGB2P26583 209 aaKnown RBP15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 KIF5AQ12840 1032 aa15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 PICALMQ13492 652 aa15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 TMEM119Q4V9L6 283 aa15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 PROM2Q8N271 834 aa15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 GJD4Q96KN9 370 aaPredicted RBP15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 RHOXF2Q9BQY4 288 aa15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 EDEM3Q9BZQ6 932 aa15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 ACBD3Q9H3P7 528 aa15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 NDST4Q9H3R1 872 aa15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 JMJD4Q9H9V9 463 aa15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 TRIM10Q9UDY6 481 aa15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 SERPINB13Q9UIV8 391 aa15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 L1RE1Q9UN81 338 aa15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 LRRC37AA6NMS7 1700 aa15.84■□□□□ 0.13
AP003555.1-202ENST00000511013 UBAP1LF5GYI3 381 aa15.83■□□□□ 0.12
AP003555.1-202ENST00000511013 SLC37A4O43826 429 aa15.83■□□□□ 0.12
AP003555.1-202ENST00000511013 MARCH6O60337 910 aa15.83■□□□□ 0.12
AP003555.1-202ENST00000511013 TNNI2P48788 182 aa15.83■□□□□ 0.12
AP003555.1-202ENST00000511013 VAV2P52735 878 aa15.83■□□□□ 0.12
AP003555.1-202ENST00000511013 SLC27A3Q5K4L6 730 aa15.83■□□□□ 0.12
AP003555.1-202ENST00000511013 ARHGAP27Q6ZUM4 889 aa15.83■□□□□ 0.12
AP003555.1-202ENST00000511013 ADGRF4Q8IZF3 695 aa15.83■□□□□ 0.12
AP003555.1-202ENST00000511013 ABCB6Q9NP58 842 aa15.83■□□□□ 0.12
AP003555.1-202ENST00000511013 BMP2KQ9NSY1 1161 aaPredicted RBP15.83■□□□□ 0.12
AP003555.1-202ENST00000511013 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.83■□□□□ 0.12
AP003555.1-202ENST00000511013 PLAGL2Q9UPG8 496 aa15.83■□□□□ 0.12
AP003555.1-202ENST00000511013 PPEF1O14829 653 aaPredicted RBP15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 HLA-DOAP06340 250 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 KLK7P49862 253 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 IQCEQ6IPM2 695 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 TXLNBQ8N3L3 684 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 PURBQ96QR8 312 aaKnown RBP15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 ZC3H12CQ9C0D7 883 aaKnown RBP15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 USP40Q9NVE5 1235 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 DDX25Q9UHL0 483 aaKnown RBP15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 SIK3Q9Y2K2 1263 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 KDM3AQ9Y4C1 1321 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 LTBP1Q14766 1721 aa15.82■□□□□ 0.12
AP003555.1-202ENST00000511013 IDEP14735 1019 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms