RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 ARIH2O95376 493 aa21.52■■□□□ 1.04
LSM6-206ENST00000510331 HOXA13P31271 388 aaPredicted RBP21.52■■□□□ 1.04
LSM6-206ENST00000510331 LIFRP42702 1097 aa21.52■■□□□ 1.04
LSM6-206ENST00000510331 ANKRD33Q7Z3H0 272 aa21.52■■□□□ 1.04
LSM6-206ENST00000510331 TDHQ8IZJ6 230 aa21.52■■□□□ 1.04
LSM6-206ENST00000510331 NSUN6Q8TEA1 469 aaKnown RBP21.52■■□□□ 1.04
LSM6-206ENST00000510331 COPS5Q92905 334 aa21.52■■□□□ 1.04
LSM6-206ENST00000510331 MAP3K14Q99558 947 aa21.52■■□□□ 1.04
LSM6-206ENST00000510331 SPZ1Q9BXG8 430 aa21.52■■□□□ 1.04
LSM6-206ENST00000510331 PNMA6FA0A0J9YX94 578 aa21.51■■□□□ 1.03
LSM6-206ENST00000510331 ITGB8P26012 769 aa21.51■■□□□ 1.03
LSM6-206ENST00000510331 KIF5BP33176 963 aa21.51■■□□□ 1.03
LSM6-206ENST00000510331 MICU3Q86XE3 530 aa21.51■■□□□ 1.03
LSM6-206ENST00000510331 CMTR1Q8N1G2 835 aaKnown RBP21.51■■□□□ 1.03
LSM6-206ENST00000510331 SCFD2Q8WU76 684 aa21.51■■□□□ 1.03
LSM6-206ENST00000510331 VTI1AQ96AJ9 217 aa21.51■■□□□ 1.03
LSM6-206ENST00000510331 NEK1Q96PY6 1258 aa21.51■■□□□ 1.03
LSM6-206ENST00000510331 PXMP2Q9NR77 195 aa21.51■■□□□ 1.03
LSM6-206ENST00000510331 Q9Y3F1 56 aa21.51■■□□□ 1.03
LSM6-206ENST00000510331 B4DLN1 442 aa21.5■■□□□ 1.03
LSM6-206ENST00000510331 MRPL12P52815 198 aaKnown RBP21.5■■□□□ 1.03
LSM6-206ENST00000510331 FAAP100Q0VG06 881 aa21.5■■□□□ 1.03
LSM6-206ENST00000510331 ARHGEF16Q5VV41 709 aa21.5■■□□□ 1.03
LSM6-206ENST00000510331 OR6J1Q8NGC5 347 aa21.5■■□□□ 1.03
LSM6-206ENST00000510331 BADQ92934 168 aa21.5■■□□□ 1.03
LSM6-206ENST00000510331 LRCH3Q96II8 777 aa21.5■■□□□ 1.03
LSM6-206ENST00000510331 SLC12A7Q9Y666 1083 aa21.5■■□□□ 1.03
LSM6-206ENST00000510331 SCN10AQ9Y5Y9 1956 aa21.5■■□□□ 1.03
LSM6-206ENST00000510331 ARVCFO00192 962 aa21.49■■□□□ 1.03
LSM6-206ENST00000510331 PSMC6P62333 389 aa21.49■■□□□ 1.03
LSM6-206ENST00000510331 SGMS1Q86VZ5 419 aa21.49■■□□□ 1.03
LSM6-206ENST00000510331 TMTC2Q8N394 836 aa21.49■■□□□ 1.03
LSM6-206ENST00000510331 SRBD1Q8N5C6 995 aaKnown RBP21.49■■□□□ 1.03
LSM6-206ENST00000510331 IL31RAQ8NI17 732 aa21.49■■□□□ 1.03
LSM6-206ENST00000510331 TOX2Q96NM4 488 aa21.49■■□□□ 1.03
LSM6-206ENST00000510331 MROH7Q68CQ1 1323 aa21.49■■□□□ 1.03
LSM6-206ENST00000510331 DCDC2CA8MYV0 355 aa21.48■■□□□ 1.03
LSM6-206ENST00000510331 KIAA0355O15063 1070 aa21.48■■□□□ 1.03
LSM6-206ENST00000510331 ZEB2O60315 1214 aa21.48■■□□□ 1.03
LSM6-206ENST00000510331 CALM1P0DP23 149 aa21.48■■□□□ 1.03
LSM6-206ENST00000510331 CALM2P0DP24 149 aa21.48■■□□□ 1.03
LSM6-206ENST00000510331 CALM3P0DP25 149 aa21.48■■□□□ 1.03
LSM6-206ENST00000510331 TXNP10599 105 aaKnown RBP21.48■■□□□ 1.03
LSM6-206ENST00000510331 CDK7P50613 346 aa21.48■■□□□ 1.03
LSM6-206ENST00000510331 TTLL4Q14679 1199 aa21.48■■□□□ 1.03
LSM6-206ENST00000510331 TSGA10IPQ3SY00 556 aa21.48■■□□□ 1.03
LSM6-206ENST00000510331 SEPT14Q6ZU15 432 aa21.48■■□□□ 1.03
LSM6-206ENST00000510331 FAM126BQ8IXS8 530 aa21.48■■□□□ 1.03
LSM6-206ENST00000510331 RRP36Q96EU6 259 aaKnown RBP21.48■■□□□ 1.03
LSM6-206ENST00000510331 IWS1Q96ST2 819 aa21.48■■□□□ 1.03
LSM6-206ENST00000510331 TMEM39AQ9NV64 488 aa21.48■■□□□ 1.03
LSM6-206ENST00000510331 TBX21Q9UL17 535 aa21.48■■□□□ 1.03
LSM6-206ENST00000510331 GRIN2DO15399 1336 aa21.48■■□□□ 1.03
LSM6-206ENST00000510331 GCOM1H8Y6P7 765 aaPredicted RBP21.47■■□□□ 1.03
LSM6-206ENST00000510331 NKRFO15226 690 aaKnown RBP eCLIP21.47■■□□□ 1.03
LSM6-206ENST00000510331 CABYRO75952 493 aa21.47■■□□□ 1.03
LSM6-206ENST00000510331 NR3C2P08235 984 aa21.47■■□□□ 1.03
LSM6-206ENST00000510331 POLR2MP0CAP2 368 aa21.47■■□□□ 1.03
LSM6-206ENST00000510331 CPA1P15085 419 aa21.47■■□□□ 1.03
LSM6-206ENST00000510331 CPT1AP50416 773 aa21.47■■□□□ 1.03
LSM6-206ENST00000510331 EXOSC10Q01780 885 aaKnown RBP21.47■■□□□ 1.03
LSM6-206ENST00000510331 KRT32Q14532 448 aa21.47■■□□□ 1.03
LSM6-206ENST00000510331 STXBP2Q15833 593 aa21.47■■□□□ 1.03
LSM6-206ENST00000510331 APOA5Q6Q788 366 aa21.47■■□□□ 1.03
LSM6-206ENST00000510331 TMTC3Q6ZXV5 915 aa21.47■■□□□ 1.03
LSM6-206ENST00000510331 DHX32Q7L7V1 743 aaKnown RBP21.47■■□□□ 1.03
LSM6-206ENST00000510331 PDCD2LQ9BRP1 358 aa21.47■■□□□ 1.03
LSM6-206ENST00000510331 PPP4R2Q9NY27 417 aa21.47■■□□□ 1.03
LSM6-206ENST00000510331 SEC63Q9UGP8 760 aaKnown RBP21.47■■□□□ 1.03
LSM6-206ENST00000510331 hCG_1642624A0A1W2PR95 340 aa21.46■■□□□ 1.03
LSM6-206ENST00000510331 MYL3P08590 195 aa21.46■■□□□ 1.03
LSM6-206ENST00000510331 HSPA4P34932 840 aa21.46■■□□□ 1.03
LSM6-206ENST00000510331 PURAQ00577 322 aaKnown RBP21.46■■□□□ 1.03
LSM6-206ENST00000510331 TRAF1Q13077 416 aa21.46■■□□□ 1.03
LSM6-206ENST00000510331 ITGA7Q13683 1181 aa21.46■■□□□ 1.03
LSM6-206ENST00000510331 CCDC62Q6P9F0 684 aa21.46■■□□□ 1.03
LSM6-206ENST00000510331 FCHSD1Q86WN1 690 aa21.46■■□□□ 1.03
LSM6-206ENST00000510331 LZTS2Q9BRK4 669 aa21.46■■□□□ 1.03
LSM6-206ENST00000510331 BRPF3Q9ULD4 1205 aa21.46■■□□□ 1.03
LSM6-206ENST00000510331 MYCLP12524 364 aaPredicted RBP21.45■■□□□ 1.02
LSM6-206ENST00000510331 RAG1P15918 1043 aa21.45■■□□□ 1.02
LSM6-206ENST00000510331 SMARCA1P28370 1054 aa21.45■■□□□ 1.02
LSM6-206ENST00000510331 GNAQP50148 359 aa21.45■■□□□ 1.02
LSM6-206ENST00000510331 PGM5Q15124 567 aa21.45■■□□□ 1.02
LSM6-206ENST00000510331 LY6KQ17RY6 165 aa21.45■■□□□ 1.02
LSM6-206ENST00000510331 C9orf50Q5SZB4 431 aa21.45■■□□□ 1.02
LSM6-206ENST00000510331 FANCBQ8NB91 859 aa21.45■■□□□ 1.02
LSM6-206ENST00000510331 SLC43A3Q8NBI5 491 aa21.45■■□□□ 1.02
LSM6-206ENST00000510331 KCNB2Q92953 911 aa21.45■■□□□ 1.02
LSM6-206ENST00000510331 JAKMIP1Q96N16 626 aaKnown RBP21.45■■□□□ 1.02
LSM6-206ENST00000510331 MAP3K20Q9NYL2 800 aaKnown RBP21.45■■□□□ 1.02
LSM6-206ENST00000510331 SNX14Q9Y5W7 946 aa21.45■■□□□ 1.02
LSM6-206ENST00000510331 CNTNAP5Q8WYK1 1306 aa21.45■■□□□ 1.02
LSM6-206ENST00000510331 MYH7BA7E2Y1 1941 aa21.45■■□□□ 1.02
LSM6-206ENST00000510331 DOCK5Q9H7D0 1870 aa21.44■■□□□ 1.02
LSM6-206ENST00000510331 RGS20O76081 388 aa21.44■■□□□ 1.02
LSM6-206ENST00000510331 ARHGAP1Q07960 439 aa21.44■■□□□ 1.02
LSM6-206ENST00000510331 LRIT3Q3SXY7 679 aa21.44■■□□□ 1.02
LSM6-206ENST00000510331 CCDC82Q8N4S0 544 aa21.44■■□□□ 1.02
LSM6-206ENST00000510331 SAMD3Q8N6K7 520 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms