RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 LY9Q9HBG7 655 aa11.97□□□□□ -0.49
PFDN1-203ENST00000510217 MRPL11Q9Y3B7 192 aaKnown RBP11.97□□□□□ -0.49
PFDN1-203ENST00000510217 SCN10AQ9Y5Y9 1956 aa11.96□□□□□ -0.49
PFDN1-203ENST00000510217 GRIN2DO15399 1336 aa11.96□□□□□ -0.49
PFDN1-203ENST00000510217 ARIH2O95376 493 aa11.96□□□□□ -0.49
PFDN1-203ENST00000510217 HSD17B4P51659 736 aa11.96□□□□□ -0.49
PFDN1-203ENST00000510217 GHRHRQ02643 423 aa11.96□□□□□ -0.49
PFDN1-203ENST00000510217 PPP2R5BQ15173 497 aa11.96□□□□□ -0.49
PFDN1-203ENST00000510217 C9orf50Q5SZB4 431 aa11.96□□□□□ -0.49
PFDN1-203ENST00000510217 GPR153Q6NV75 609 aa11.96□□□□□ -0.49
PFDN1-203ENST00000510217 MCF2L2Q86YR7 1114 aa11.96□□□□□ -0.49
PFDN1-203ENST00000510217 SLC43A3Q8NBI5 491 aa11.96□□□□□ -0.49
PFDN1-203ENST00000510217 TAAR1Q96RJ0 339 aa11.96□□□□□ -0.49
PFDN1-203ENST00000510217 MPHOSPH6Q99547 160 aaKnown RBP11.96□□□□□ -0.49
PFDN1-203ENST00000510217 RIOX1Q9H6W3 641 aa11.96□□□□□ -0.49
PFDN1-203ENST00000510217 ANO2Q9NQ90 1003 aa11.96□□□□□ -0.49
PFDN1-203ENST00000510217 GPHNQ9NQX3 736 aaPredicted RBP11.96□□□□□ -0.49
PFDN1-203ENST00000510217 TMEM39AQ9NV64 488 aa11.96□□□□□ -0.49
PFDN1-203ENST00000510217 SH2B2O14492 632 aaPredicted RBP11.95□□□□□ -0.5
PFDN1-203ENST00000510217 PRC1O43663 620 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 ZEB2O60315 1214 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 CABYRO75952 493 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 CFBP00751 764 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 CD4P01730 458 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 RAG1P15918 1043 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 EPHB4P54760 987 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 PSMC6P62333 389 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 NECTIN1Q15223 517 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 SHHQ15465 462 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 CREB3L3Q68CJ9 461 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 CATIPQ7Z7H3 387 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 HOMER1Q86YM7 354 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 ZNF654Q8IZM8 581 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 OR6J1Q8NGC5 347 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 SCFD2Q8WU76 684 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 SPOCK2Q92563 424 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 COPS5Q92905 334 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 VTI1AQ96AJ9 217 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 PIGSQ96S52 555 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 MTA3Q9BTC8 594 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 MYL10Q9BUA6 226 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 TANC1Q9C0D5 1861 aa11.95□□□□□ -0.5
PFDN1-203ENST00000510217 BAZ2BQ9UIF8 2168 aaKnown RBP11.94□□□□□ -0.5
PFDN1-203ENST00000510217 B4DLN1 442 aa11.94□□□□□ -0.5
PFDN1-203ENST00000510217 NKRFO15226 690 aaKnown RBP eCLIP11.94□□□□□ -0.5
PFDN1-203ENST00000510217 DDAH1O94760 285 aa11.94□□□□□ -0.5
PFDN1-203ENST00000510217 TIMP1P01033 207 aa11.94□□□□□ -0.5
PFDN1-203ENST00000510217 EIF2AK2P19525 551 aaKnown RBP11.94□□□□□ -0.5
PFDN1-203ENST00000510217 CPT1AP50416 773 aa11.94□□□□□ -0.5
PFDN1-203ENST00000510217 MRPL12P52815 198 aaKnown RBP11.94□□□□□ -0.5
PFDN1-203ENST00000510217 PURAQ00577 322 aaKnown RBP11.94□□□□□ -0.5
PFDN1-203ENST00000510217 FPGSQ05932 587 aa11.94□□□□□ -0.5
PFDN1-203ENST00000510217 ITGA7Q13683 1181 aa11.94□□□□□ -0.5
PFDN1-203ENST00000510217 CASC1Q6TDU7 716 aa11.94□□□□□ -0.5
PFDN1-203ENST00000510217 Q7L0L9 218 aa11.94□□□□□ -0.5
PFDN1-203ENST00000510217 NSUN6Q8TEA1 469 aaKnown RBP11.94□□□□□ -0.5
PFDN1-203ENST00000510217 RMDN3Q96TC7 470 aa11.94□□□□□ -0.5
PFDN1-203ENST00000510217 PXMP2Q9NR77 195 aa11.94□□□□□ -0.5
PFDN1-203ENST00000510217 PCDHA1Q9Y5I3 950 aa11.94□□□□□ -0.5
PFDN1-203ENST00000510217 LAMA2P24043 3122 aaKnown RBP11.93□□□□□ -0.5
PFDN1-203ENST00000510217 TLR3O15455 904 aaKnown RBP11.93□□□□□ -0.5
PFDN1-203ENST00000510217 B4GALT4O60513 344 aa11.93□□□□□ -0.5
PFDN1-203ENST00000510217 TXNP10599 105 aaKnown RBP11.93□□□□□ -0.5
PFDN1-203ENST00000510217 HOXA13P31271 388 aaPredicted RBP11.93□□□□□ -0.5
PFDN1-203ENST00000510217 MCM5P33992 734 aa11.93□□□□□ -0.5
PFDN1-203ENST00000510217 TTLL4Q14679 1199 aa11.93□□□□□ -0.5
PFDN1-203ENST00000510217 ARHGEF16Q5VV41 709 aa11.93□□□□□ -0.5
PFDN1-203ENST00000510217 CCDC62Q6P9F0 684 aa11.93□□□□□ -0.5
PFDN1-203ENST00000510217 TMEM87BQ96K49 555 aa11.93□□□□□ -0.5
PFDN1-203ENST00000510217 IWS1Q96ST2 819 aa11.93□□□□□ -0.5
PFDN1-203ENST00000510217 MAP3K14Q99558 947 aa11.93□□□□□ -0.5
PFDN1-203ENST00000510217 SPZ1Q9BXG8 430 aa11.93□□□□□ -0.5
PFDN1-203ENST00000510217 POLR3EQ9NVU0 708 aa11.93□□□□□ -0.5
PFDN1-203ENST00000510217 PNMA6FA0A0J9YX94 578 aa11.92□□□□□ -0.5
PFDN1-203ENST00000510217 A6NJR5 290 aa11.92□□□□□ -0.5
PFDN1-203ENST00000510217 CDC45O75419 566 aa11.92□□□□□ -0.5
PFDN1-203ENST00000510217 PLEKHA8P1O95397 391 aa11.92□□□□□ -0.5
PFDN1-203ENST00000510217 MYL3P08590 195 aa11.92□□□□□ -0.5
PFDN1-203ENST00000510217 STXBP2Q15833 593 aa11.92□□□□□ -0.5
PFDN1-203ENST00000510217 LY6KQ17RY6 165 aa11.92□□□□□ -0.5
PFDN1-203ENST00000510217 MFSD5Q6N075 450 aa11.92□□□□□ -0.5
PFDN1-203ENST00000510217 SEPT14Q6ZU15 432 aa11.92□□□□□ -0.5
PFDN1-203ENST00000510217 DEFB123Q8N688 67 aa11.92□□□□□ -0.5
PFDN1-203ENST00000510217 IL31RAQ8NI17 732 aa11.92□□□□□ -0.5
PFDN1-203ENST00000510217 CTCFLQ8NI51 663 aaPredicted RBP11.92□□□□□ -0.5
PFDN1-203ENST00000510217 PDCD2LQ9BRP1 358 aa11.92□□□□□ -0.5
PFDN1-203ENST00000510217 LRRC2Q9BYS8 371 aa11.92□□□□□ -0.5
PFDN1-203ENST00000510217 PPP1R12CQ9BZL4 782 aa11.92□□□□□ -0.5
PFDN1-203ENST00000510217 ALDH8A1Q9H2A2 487 aaPredicted RBP11.92□□□□□ -0.5
PFDN1-203ENST00000510217 MAP3K20Q9NYL2 800 aaKnown RBP11.92□□□□□ -0.5
PFDN1-203ENST00000510217 FRMPD4Q14CM0 1322 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 UMODL1Q5DID0 1318 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 CCDC69A6NI79 296 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 RGS20O76081 388 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 NR3C2P08235 984 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 MMP3P08254 477 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 CSF2RAP15509 400 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 RXRAP19793 462 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 KIF5BP33176 963 aa11.91□□□□□ -0.5
PFDN1-203ENST00000510217 LIFRP42702 1097 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms