RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 MCMDC2Q4G0Z9 681 aa12.24□□□□□ -0.45
DDX41-211ENST00000510171 HERC6Q8IVU3 1022 aa12.24□□□□□ -0.45
DDX41-211ENST00000510171 PPP1R13LQ8WUF5 828 aa12.24□□□□□ -0.45
DDX41-211ENST00000510171 ARNTL2Q8WYA1 636 aa12.24□□□□□ -0.45
DDX41-211ENST00000510171 COPS5Q92905 334 aa12.24□□□□□ -0.45
DDX41-211ENST00000510171 C1QTNF1Q9BXJ1 281 aa12.24□□□□□ -0.45
DDX41-211ENST00000510171 COG5Q9UP83 839 aa12.24□□□□□ -0.45
DDX41-211ENST00000510171 SPTBN5Q9NRC6 3674 aaKnown RBP12.24□□□□□ -0.45
DDX41-211ENST00000510171 WDR19Q8NEZ3 1342 aa12.23□□□□□ -0.45
DDX41-211ENST00000510171 BAIAP3O94812 1187 aa12.23□□□□□ -0.45
DDX41-211ENST00000510171 KCNQ1P51787 676 aa12.23□□□□□ -0.45
DDX41-211ENST00000510171 PTGISQ16647 500 aa12.23□□□□□ -0.45
DDX41-211ENST00000510171 ANKRD45Q5TZF3 282 aa12.23□□□□□ -0.45
DDX41-211ENST00000510171 RGS22Q8NE09 1264 aa12.23□□□□□ -0.45
DDX41-211ENST00000510171 EPOPA6NHQ4 379 aa12.22□□□□□ -0.45
DDX41-211ENST00000510171 TLL1O43897 1013 aa12.22□□□□□ -0.45
DDX41-211ENST00000510171 SNHG28P0DPA3 235 aa12.22□□□□□ -0.45
DDX41-211ENST00000510171 HSPD1P10809 573 aaKnown RBP12.22□□□□□ -0.45
DDX41-211ENST00000510171 PCP11498 1178 aaKnown RBP12.22□□□□□ -0.45
DDX41-211ENST00000510171 RRP1P56182 461 aaKnown RBP12.22□□□□□ -0.45
DDX41-211ENST00000510171 KRT40Q6A162 431 aa12.22□□□□□ -0.45
DDX41-211ENST00000510171 MFSD6Q6ZSS7 791 aa12.22□□□□□ -0.45
DDX41-211ENST00000510171 CCDC155Q8N6L0 562 aa12.22□□□□□ -0.45
DDX41-211ENST00000510171 HLA-CQ95604 372 aa12.22□□□□□ -0.45
DDX41-211ENST00000510171 FAM122AQ96E09 287 aa12.22□□□□□ -0.45
DDX41-211ENST00000510171 FAM227BQ96M60 508 aa12.22□□□□□ -0.45
DDX41-211ENST00000510171 MYH7P12883 1935 aa12.21□□□□□ -0.45
DDX41-211ENST00000510171 SALL3Q9BXA9 1300 aa12.21□□□□□ -0.45
DDX41-211ENST00000510171 ARHGEF15O94989 841 aa12.21□□□□□ -0.45
DDX41-211ENST00000510171 ARIH2O95376 493 aa12.21□□□□□ -0.45
DDX41-211ENST00000510171 KCNJ6P48051 423 aa12.21□□□□□ -0.45
DDX41-211ENST00000510171 HAND2P61296 217 aa12.21□□□□□ -0.45
DDX41-211ENST00000510171 USH1GQ495M9 461 aa12.21□□□□□ -0.45
DDX41-211ENST00000510171 GPATCH4Q5T3I0 446 aaKnown RBP12.21□□□□□ -0.45
DDX41-211ENST00000510171 CCDC62Q6P9F0 684 aa12.21□□□□□ -0.45
DDX41-211ENST00000510171 TICAM2Q86XR7 235 aa12.21□□□□□ -0.45
DDX41-211ENST00000510171 CAGE1Q8TC20 777 aa12.21□□□□□ -0.45
DDX41-211ENST00000510171 AFAP1L1Q8TED9 768 aa12.21□□□□□ -0.45
DDX41-211ENST00000510171 AFG1LQ8WV93 481 aa12.21□□□□□ -0.45
DDX41-211ENST00000510171 UBA5Q9GZZ9 404 aa12.21□□□□□ -0.45
DDX41-211ENST00000510171 MCM3APO60318 1980 aa12.2□□□□□ -0.46
DDX41-211ENST00000510171 MYH4Q9Y623 1939 aa12.2□□□□□ -0.46
DDX41-211ENST00000510171 A0A0D9SFI3 127 aa12.2□□□□□ -0.46
DDX41-211ENST00000510171 PARNO95453 639 aaKnown RBP12.2□□□□□ -0.46
DDX41-211ENST00000510171 GH1P01241 217 aa12.2□□□□□ -0.46
DDX41-211ENST00000510171 GOLGA8HP0CJ92 632 aa12.2□□□□□ -0.46
DDX41-211ENST00000510171 CASTP20810 708 aaKnown RBP12.2□□□□□ -0.46
DDX41-211ENST00000510171 PLA2G5P39877 138 aa12.2□□□□□ -0.46
DDX41-211ENST00000510171 PDE1AP54750 535 aa12.2□□□□□ -0.46
DDX41-211ENST00000510171 GRB10Q13322 594 aa12.2□□□□□ -0.46
DDX41-211ENST00000510171 LY6KQ17RY6 165 aa12.2□□□□□ -0.46
DDX41-211ENST00000510171 GDF6Q6KF10 455 aaPredicted RBP12.2□□□□□ -0.46
DDX41-211ENST00000510171 SEPT14Q6ZU15 432 aa12.2□□□□□ -0.46
DDX41-211ENST00000510171 SESTD1Q86VW0 696 aa12.2□□□□□ -0.46
DDX41-211ENST00000510171 DGKHQ86XP1 1220 aa12.2□□□□□ -0.46
DDX41-211ENST00000510171 NSUN6Q8TEA1 469 aaKnown RBP12.2□□□□□ -0.46
DDX41-211ENST00000510171 ESR2Q92731 530 aa12.2□□□□□ -0.46
DDX41-211ENST00000510171 ZBED2Q9BTP6 218 aa12.2□□□□□ -0.46
DDX41-211ENST00000510171 MAF1Q9H063 256 aa12.2□□□□□ -0.46
DDX41-211ENST00000510171 RNF41Q9H4P4 317 aaPredicted RBP12.2□□□□□ -0.46
DDX41-211ENST00000510171 ABCB11O95342 1321 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 MMP3P08254 477 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 SELPP16109 830 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 WDR5P61964 334 aaKnown RBP12.19□□□□□ -0.46
DDX41-211ENST00000510171 ARHGAP1Q07960 439 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 GPNMBQ14956 572 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 STXBP2Q15833 593 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 CDC37Q16543 378 aaPredicted RBP12.19□□□□□ -0.46
DDX41-211ENST00000510171 LRRC8DQ7L1W4 858 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 CHST3Q7LGC8 479 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 ZNF589Q86UQ0 364 aaPredicted RBP12.19□□□□□ -0.46
DDX41-211ENST00000510171 MCF2L2Q86YR7 1114 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 SYTL5Q8TDW5 730 aaPredicted RBP12.19□□□□□ -0.46
DDX41-211ENST00000510171 TBC1D5Q92609 795 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 KAT2BQ92831 832 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 TAAR1Q96RJ0 339 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 CTAGE1Q96RT6 745 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 IWS1Q96ST2 819 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 RMDN3Q96TC7 470 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 EPHX3Q9H6B9 360 aa12.19□□□□□ -0.46
DDX41-211ENST00000510171 ZMYM6O95789 1325 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 ABHD14A-ACY1A0A1B0GW23 586 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 ZNF213O14771 459 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 LPXNO60711 386 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 CKBP12277 381 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 NMIQ13287 307 aaPredicted RBP12.18□□□□□ -0.46
DDX41-211ENST00000510171 AAMPQ13685 434 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 DGKDQ16760 1214 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 CCDC178Q5BJE1 867 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 ARHGEF16Q5VV41 709 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 CNKSR3Q6P9H4 555 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 TMCO2Q7Z6W1 182 aaPredicted RBP12.18□□□□□ -0.46
DDX41-211ENST00000510171 TBC1D10CQ8IV04 446 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 ADGRF4Q8IZF3 695 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 C7orf31Q8N865 590 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 DHX38Q92620 1227 aaKnown RBP12.18□□□□□ -0.46
DDX41-211ENST00000510171 ZKSCAN3Q9BRR0 538 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 CPVLQ9H3G5 476 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 LMCD1Q9NZU5 365 aa12.18□□□□□ -0.46
DDX41-211ENST00000510171 CCDC171Q6TFL3 1326 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms