RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 MLANAQ16655 118 aa10.13□□□□□ -0.79
TRAPPC11-206ENST00000509857 C2orf27AQ580R0 203 aa10.13□□□□□ -0.79
TRAPPC11-206ENST00000509857 LZTR1Q8N653 840 aa10.13□□□□□ -0.79
TRAPPC11-206ENST00000509857 EXOC2Q96KP1 924 aa10.13□□□□□ -0.79
TRAPPC11-206ENST00000509857 SLC26A8Q96RN1 970 aa10.13□□□□□ -0.79
TRAPPC11-206ENST00000509857 EPB41L4BQ9H329 900 aa10.13□□□□□ -0.79
TRAPPC11-206ENST00000509857 ZNF552Q9H707 407 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC11-206ENST00000509857 GULP1Q9UBP9 304 aa10.13□□□□□ -0.79
TRAPPC11-206ENST00000509857 FBLN5Q9UBX5 448 aa10.13□□□□□ -0.79
TRAPPC11-206ENST00000509857 CC2D2AQ9P2K1 1620 aa10.13□□□□□ -0.79
TRAPPC11-206ENST00000509857 TRBV23-1A0A0A0MS06 115 aa10.12□□□□□ -0.79
TRAPPC11-206ENST00000509857 PDE6BP35913 854 aa10.12□□□□□ -0.79
TRAPPC11-206ENST00000509857 FAM9AQ8IZU1 332 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC11-206ENST00000509857 RCBTB1Q8NDN9 531 aa10.12□□□□□ -0.79
TRAPPC11-206ENST00000509857 NSUN3Q9H649 340 aaKnown RBP10.12□□□□□ -0.79
TRAPPC11-206ENST00000509857 GPR27Q9NS67 375 aa10.12□□□□□ -0.79
TRAPPC11-206ENST00000509857 RWDD3Q9Y3V2 267 aa10.12□□□□□ -0.79
TRAPPC11-206ENST00000509857 TIMM13Q9Y5L4 95 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC11-206ENST00000509857 SOGA1O94964 1423 aa10.12□□□□□ -0.79
TRAPPC11-206ENST00000509857 CADPSQ9ULU8 1353 aa10.12□□□□□ -0.79
TRAPPC11-206ENST00000509857 MPOP05164 745 aa10.11□□□□□ -0.79
TRAPPC11-206ENST00000509857 GLI4P10075 376 aa10.11□□□□□ -0.79
TRAPPC11-206ENST00000509857 GTF2A2P52657 109 aa10.11□□□□□ -0.79
TRAPPC11-206ENST00000509857 SUMO1P63165 101 aaKnown RBP10.11□□□□□ -0.79
TRAPPC11-206ENST00000509857 CBX2Q14781 532 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC11-206ENST00000509857 FAM209AQ5JX71 171 aa10.11□□□□□ -0.79
TRAPPC11-206ENST00000509857 POU5F2Q8N7G0 328 aa10.11□□□□□ -0.79
TRAPPC11-206ENST00000509857 DCAF4Q8WV16 495 aa10.11□□□□□ -0.79
TRAPPC11-206ENST00000509857 KISS1RQ969F8 398 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC11-206ENST00000509857 DIRC2Q96SL1 478 aa10.11□□□□□ -0.79
TRAPPC11-206ENST00000509857 CDC6Q99741 560 aa10.11□□□□□ -0.79
TRAPPC11-206ENST00000509857 DHRS4Q9BTZ2 278 aa10.11□□□□□ -0.79
TRAPPC11-206ENST00000509857 MYO1BO43795 1136 aa10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 PEX10O60683 326 aa10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 CYBBP04839 570 aa10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 DBHP09172 617 aa10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 LCP1P13796 627 aa10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 TACR1P25103 407 aa10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 RPL11P62913 178 aaKnown RBP10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 MESP2Q0VG99 397 aa10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 BICRALQ6AI39 1079 aa10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 STYK1Q6J9G0 422 aa10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 OGFOD2Q6N063 350 aa10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 USP53Q70EK8 1073 aa10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 ZSWIM2Q8NEG5 633 aa10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 PLEKHO2Q8TD55 490 aa10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 ZFYVE21Q9BQ24 234 aa10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 DCP1AQ9NPI6 582 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 KLHL14Q9P2G3 628 aa10.1□□□□□ -0.79
TRAPPC11-206ENST00000509857 ABLIM1O14639 778 aa10.09□□□□□ -0.79
TRAPPC11-206ENST00000509857 SDHBP21912 280 aa10.09□□□□□ -0.79
TRAPPC11-206ENST00000509857 NR1I3Q14994 352 aa10.09□□□□□ -0.79
TRAPPC11-206ENST00000509857 PAQR3Q6TCH7 311 aa10.09□□□□□ -0.79
TRAPPC11-206ENST00000509857 NLRP10Q86W26 655 aa10.09□□□□□ -0.79
TRAPPC11-206ENST00000509857 PHF20Q9BVI0 1012 aa10.09□□□□□ -0.79
TRAPPC11-206ENST00000509857 MRPS23Q9Y3D9 190 aaKnown RBP10.09□□□□□ -0.79
TRAPPC11-206ENST00000509857 PTCH2Q9Y6C5 1203 aa10.09□□□□□ -0.79
TRAPPC11-206ENST00000509857 A0A1W2PQJ5 194 aa10.08□□□□□ -0.8
TRAPPC11-206ENST00000509857 TMEM62Q0P6H9 643 aa10.08□□□□□ -0.8
TRAPPC11-206ENST00000509857 RPTNQ6XPR3 784 aa10.08□□□□□ -0.8
TRAPPC11-206ENST00000509857 ZNF605Q86T29 641 aa10.08□□□□□ -0.8
TRAPPC11-206ENST00000509857 CABP7Q86V35 215 aa10.08□□□□□ -0.8
TRAPPC11-206ENST00000509857 NETO2Q8NC67 525 aa10.08□□□□□ -0.8
TRAPPC11-206ENST00000509857 FBXO15Q8NCQ5 510 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC11-206ENST00000509857 IPO9Q96P70 1041 aaKnown RBP10.08□□□□□ -0.8
TRAPPC11-206ENST00000509857 MARCH2Q9P0N8 246 aa10.08□□□□□ -0.8
TRAPPC11-206ENST00000509857 FBXL7Q9UJT9 491 aa10.08□□□□□ -0.8
TRAPPC11-206ENST00000509857 ERICH3Q5RHP9 1530 aa10.07□□□□□ -0.8
TRAPPC11-206ENST00000509857 CCDC163A0A0D9SF12 145 aa10.07□□□□□ -0.8
TRAPPC11-206ENST00000509857 C6orf222P0C671 652 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC11-206ENST00000509857 MAPKAPK2P49137 400 aa10.07□□□□□ -0.8
TRAPPC11-206ENST00000509857 RAB3GAP1Q15042 981 aa10.07□□□□□ -0.8
TRAPPC11-206ENST00000509857 RIOX2Q8IUF8 465 aa10.07□□□□□ -0.8
TRAPPC11-206ENST00000509857 PCDHA2Q9Y5H9 948 aa10.07□□□□□ -0.8
TRAPPC11-206ENST00000509857 X6R8D5 127 aa10.07□□□□□ -0.8
TRAPPC11-206ENST00000509857 MYOCOSA0A1B0GUC4 107 aa10.06□□□□□ -0.8
TRAPPC11-206ENST00000509857 BLACEA4D250 179 aa10.06□□□□□ -0.8
TRAPPC11-206ENST00000509857 NUDT19A8MXV4 375 aa10.06□□□□□ -0.8
TRAPPC11-206ENST00000509857 FARP2O94887 1054 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC11-206ENST00000509857 FUCA1P04066 466 aa10.06□□□□□ -0.8
TRAPPC11-206ENST00000509857 BCL6P41182 706 aa10.06□□□□□ -0.8
TRAPPC11-206ENST00000509857 LSAMPQ13449 338 aa10.06□□□□□ -0.8
TRAPPC11-206ENST00000509857 PLEKHN1Q494U1 663 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC11-206ENST00000509857 OLFML2BQ68BL8 750 aa10.06□□□□□ -0.8
TRAPPC11-206ENST00000509857 WWC2Q6AWC2 1192 aa10.06□□□□□ -0.8
TRAPPC11-206ENST00000509857 MAMDC2Q7Z304 686 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC11-206ENST00000509857 TEX2Q8IWB9 1127 aa10.06□□□□□ -0.8
TRAPPC11-206ENST00000509857 CDIP1Q9H305 208 aa10.06□□□□□ -0.8
TRAPPC11-206ENST00000509857 CUX1P39880 1505 aa10.06□□□□□ -0.8
TRAPPC11-206ENST00000509857 CEP162Q5TB80 1403 aa10.06□□□□□ -0.8
TRAPPC11-206ENST00000509857 H7BY64 318 aa10.05□□□□□ -0.8
TRAPPC11-206ENST00000509857 GPR85P60893 370 aa10.05□□□□□ -0.8
TRAPPC11-206ENST00000509857 KCNT2Q6UVM3 1135 aa10.05□□□□□ -0.8
TRAPPC11-206ENST00000509857 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.05□□□□□ -0.8
TRAPPC11-206ENST00000509857 SH3TC2Q8TF17 1288 aa10.05□□□□□ -0.8
TRAPPC11-206ENST00000509857 FAM84AQ96KN4 292 aa10.05□□□□□ -0.8
TRAPPC11-206ENST00000509857 MCOLN1Q9GZU1 580 aa10.05□□□□□ -0.8
TRAPPC11-206ENST00000509857 C22orf46C9J442 243 aa10.04□□□□□ -0.8
TRAPPC11-206ENST00000509857 MSCO60682 206 aa10.04□□□□□ -0.8
TRAPPC11-206ENST00000509857 SEMA7AO75326 666 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms