RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 CAGE1Q8TC20 777 aa12.19□□□□□ -0.46
MBD4-208ENST00000509828 COPS5Q92905 334 aa12.19□□□□□ -0.46
MBD4-208ENST00000509828 RANBP17Q9H2T7 1088 aaKnown RBP12.19□□□□□ -0.46
MBD4-208ENST00000509828 INCENPQ9NQS7 918 aa12.19□□□□□ -0.46
MBD4-208ENST00000509828 IL17RBQ9NRM6 502 aa12.19□□□□□ -0.46
MBD4-208ENST00000509828 LMCD1Q9NZU5 365 aa12.19□□□□□ -0.46
MBD4-208ENST00000509828 MYH4Q9Y623 1939 aa12.19□□□□□ -0.46
MBD4-208ENST00000509828 A6NJR5 290 aa12.18□□□□□ -0.46
MBD4-208ENST00000509828 ARHGEF15O94989 841 aa12.18□□□□□ -0.46
MBD4-208ENST00000509828 TOP1P11387 765 aaKnown RBP12.18□□□□□ -0.46
MBD4-208ENST00000509828 SELPP16109 830 aa12.18□□□□□ -0.46
MBD4-208ENST00000509828 CASTP20810 708 aaKnown RBP12.18□□□□□ -0.46
MBD4-208ENST00000509828 IKBKEQ14164 716 aa12.18□□□□□ -0.46
MBD4-208ENST00000509828 EP400NLQ6ZTU2 488 aa12.18□□□□□ -0.46
MBD4-208ENST00000509828 RASGRP2Q7LDG7 609 aa12.18□□□□□ -0.46
MBD4-208ENST00000509828 TMCO2Q7Z6W1 182 aaPredicted RBP12.18□□□□□ -0.46
MBD4-208ENST00000509828 C7orf31Q8N865 590 aa12.18□□□□□ -0.46
MBD4-208ENST00000509828 AFAP1L1Q8TED9 768 aa12.18□□□□□ -0.46
MBD4-208ENST00000509828 GDPD5Q8WTR4 605 aa12.18□□□□□ -0.46
MBD4-208ENST00000509828 TGS1Q96RS0 853 aaKnown RBP12.18□□□□□ -0.46
MBD4-208ENST00000509828 RAD9AQ99638 391 aa12.18□□□□□ -0.46
MBD4-208ENST00000509828 NCOR1O75376 2440 aa12.18□□□□□ -0.46
MBD4-208ENST00000509828 GREB1LQ9C091 1923 aaPredicted RBP12.17□□□□□ -0.46
MBD4-208ENST00000509828 PARNO95453 639 aaKnown RBP12.17□□□□□ -0.46
MBD4-208ENST00000509828 GH1P01241 217 aa12.17□□□□□ -0.46
MBD4-208ENST00000509828 WDR5P61964 334 aaKnown RBP12.17□□□□□ -0.46
MBD4-208ENST00000509828 RPS6P62753 249 aaKnown RBP12.17□□□□□ -0.46
MBD4-208ENST00000509828 USH1GQ495M9 461 aa12.17□□□□□ -0.46
MBD4-208ENST00000509828 ZMYM1Q5SVZ6 1142 aa12.17□□□□□ -0.46
MBD4-208ENST00000509828 CNKSR3Q6P9H4 555 aa12.17□□□□□ -0.46
MBD4-208ENST00000509828 SEPT14Q6ZU15 432 aa12.17□□□□□ -0.46
MBD4-208ENST00000509828 LRRC8DQ7L1W4 858 aa12.17□□□□□ -0.46
MBD4-208ENST00000509828 GJD3Q8N144 294 aa12.17□□□□□ -0.46
MBD4-208ENST00000509828 DNERQ8NFT8 737 aa12.17□□□□□ -0.46
MBD4-208ENST00000509828 AFG1LQ8WV93 481 aa12.17□□□□□ -0.46
MBD4-208ENST00000509828 ALG1Q9BT22 464 aa12.17□□□□□ -0.46
MBD4-208ENST00000509828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.17□□□□□ -0.46
MBD4-208ENST00000509828 GBF1Q92538 1859 aa12.17□□□□□ -0.46
MBD4-208ENST00000509828 TTC41PQ6P2S7 1318 aa12.16□□□□□ -0.46
MBD4-208ENST00000509828 MYH7P12883 1935 aa12.16□□□□□ -0.46
MBD4-208ENST00000509828 ABHD14A-ACY1A0A1B0GW23 586 aa12.16□□□□□ -0.46
MBD4-208ENST00000509828 LCHNA4D1U4 455 aa12.16□□□□□ -0.46
MBD4-208ENST00000509828 PI4K2BG5E9Z4 385 aa12.16□□□□□ -0.46
MBD4-208ENST00000509828 EFCAB14O75071 495 aa12.16□□□□□ -0.46
MBD4-208ENST00000509828 KCNA5P22460 613 aa12.16□□□□□ -0.46
MBD4-208ENST00000509828 BTNL9Q6UXG8 535 aa12.16□□□□□ -0.46
MBD4-208ENST00000509828 ALYREFQ86V81 257 aaKnown RBP12.16□□□□□ -0.46
MBD4-208ENST00000509828 TMEM47Q9BQJ4 181 aa12.16□□□□□ -0.46
MBD4-208ENST00000509828 DCTPP1Q9H773 170 aa12.16□□□□□ -0.46
MBD4-208ENST00000509828 UBE2ZQ9H832 354 aaPredicted RBP12.16□□□□□ -0.46
MBD4-208ENST00000509828 RCAN3Q9UKA8 241 aa12.16□□□□□ -0.46
MBD4-208ENST00000509828 PRRC2BQ5JSZ5 2229 aaKnown RBP12.15□□□□□ -0.46
MBD4-208ENST00000509828 DHX16O60231 1041 aaKnown RBP12.15□□□□□ -0.46
MBD4-208ENST00000509828 LPXNO60711 386 aa12.15□□□□□ -0.46
MBD4-208ENST00000509828 ALADP13716 330 aa12.15□□□□□ -0.46
MBD4-208ENST00000509828 DEFB103AP81534 67 aa12.15□□□□□ -0.46
MBD4-208ENST00000509828 DGKDQ16760 1214 aa12.15□□□□□ -0.46
MBD4-208ENST00000509828 PTPROQ16827 1216 aa12.15□□□□□ -0.46
MBD4-208ENST00000509828 LY6KQ17RY6 165 aa12.15□□□□□ -0.46
MBD4-208ENST00000509828 GDF6Q6KF10 455 aaPredicted RBP12.15□□□□□ -0.46
MBD4-208ENST00000509828 SPRED2Q7Z698 418 aa12.15□□□□□ -0.46
MBD4-208ENST00000509828 DHX37Q8IY37 1157 aaKnown RBP12.15□□□□□ -0.46
MBD4-208ENST00000509828 FBXO22Q8NEZ5 403 aa12.15□□□□□ -0.46
MBD4-208ENST00000509828 CLEC4DQ8WXI8 215 aa12.15□□□□□ -0.46
MBD4-208ENST00000509828 KHSRPQ92945 711 aaKnown RBP eCLIP12.15□□□□□ -0.46
MBD4-208ENST00000509828 SUGCTQ9HAC7 445 aa12.15□□□□□ -0.46
MBD4-208ENST00000509828 CTNNA3Q9UI47 895 aa12.15□□□□□ -0.46
MBD4-208ENST00000509828 ORC4O43929 436 aa12.14□□□□□ -0.47
MBD4-208ENST00000509828 GJB5O95377 273 aa12.14□□□□□ -0.47
MBD4-208ENST00000509828 AMHP03971 560 aa12.14□□□□□ -0.47
MBD4-208ENST00000509828 MMP3P08254 477 aa12.14□□□□□ -0.47
MBD4-208ENST00000509828 ERVK-21P61565 698 aa12.14□□□□□ -0.47
MBD4-208ENST00000509828 STXBP2Q15833 593 aa12.14□□□□□ -0.47
MBD4-208ENST00000509828 LEXMQ3ZCV2 418 aa12.14□□□□□ -0.47
MBD4-208ENST00000509828 PTCRAQ6ISU1 281 aaPredicted RBP12.14□□□□□ -0.47
MBD4-208ENST00000509828 MIER1Q8N108 512 aa12.14□□□□□ -0.47
MBD4-208ENST00000509828 NSUN6Q8TEA1 469 aaKnown RBP12.14□□□□□ -0.47
MBD4-208ENST00000509828 KATNAL1Q9BW62 490 aa12.14□□□□□ -0.47
MBD4-208ENST00000509828 FAM50BQ9Y247 325 aa12.14□□□□□ -0.47
MBD4-208ENST00000509828 INSL6Q9Y581 213 aa12.14□□□□□ -0.47
MBD4-208ENST00000509828 LINC01553A4QN01 128 aa12.13□□□□□ -0.47
MBD4-208ENST00000509828 PRR33A8MZF0 331 aa12.13□□□□□ -0.47
MBD4-208ENST00000509828 ARIH2O95376 493 aa12.13□□□□□ -0.47
MBD4-208ENST00000509828 CKBP12277 381 aa12.13□□□□□ -0.47
MBD4-208ENST00000509828 EDNRBP24530 442 aa12.13□□□□□ -0.47
MBD4-208ENST00000509828 PSEN2P49810 448 aa12.13□□□□□ -0.47
MBD4-208ENST00000509828 PUS10Q3MIT2 529 aaKnown RBP12.13□□□□□ -0.47
MBD4-208ENST00000509828 ARHGEF16Q5VV41 709 aa12.13□□□□□ -0.47
MBD4-208ENST00000509828 MFSD6Q6ZSS7 791 aa12.13□□□□□ -0.47
MBD4-208ENST00000509828 MCF2L2Q86YR7 1114 aa12.13□□□□□ -0.47
MBD4-208ENST00000509828 FAM178BQ8IXR5 827 aa12.13□□□□□ -0.47
MBD4-208ENST00000509828 MYOCDQ8IZQ8 938 aa12.13□□□□□ -0.47
MBD4-208ENST00000509828 CD320Q9NPF0 282 aa12.13□□□□□ -0.47
MBD4-208ENST00000509828 HDAC6Q9UBN7 1215 aa12.13□□□□□ -0.47
MBD4-208ENST00000509828 ANAPC4Q9UJX5 808 aa12.13□□□□□ -0.47
MBD4-208ENST00000509828 LRRC37A2A6NM11 1700 aa12.13□□□□□ -0.47
MBD4-208ENST00000509828 WDR19Q8NEZ3 1342 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 NBNO60934 754 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 GOLGA8HP0CJ92 632 aa12.12□□□□□ -0.47
MBD4-208ENST00000509828 PDHBP11177 359 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms