RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 PTPRAP18433 802 aa9.06□□□□□ -0.96
CCSER1-208ENST00000509109 TARSP26639 723 aaKnown RBP9.06□□□□□ -0.96
CCSER1-208ENST00000509109 MCAMP43121 646 aa9.06□□□□□ -0.96
CCSER1-208ENST00000509109 RHBDL3P58872 404 aa9.06□□□□□ -0.96
CCSER1-208ENST00000509109 NAA16Q6N069 864 aaPredicted RBP9.06□□□□□ -0.96
CCSER1-208ENST00000509109 PI16Q6UXB8 463 aa9.06□□□□□ -0.96
CCSER1-208ENST00000509109 C20orf204Q6ZNR8 217 aa9.06□□□□□ -0.96
CCSER1-208ENST00000509109 PRRT2Q7Z6L0 340 aaPredicted RBP9.06□□□□□ -0.96
CCSER1-208ENST00000509109 CD163Q86VB7 1156 aa9.06□□□□□ -0.96
CCSER1-208ENST00000509109 TEX11Q8IYF3 940 aa9.06□□□□□ -0.96
CCSER1-208ENST00000509109 RGL4Q8IZJ4 473 aa9.06□□□□□ -0.96
CCSER1-208ENST00000509109 SMCR8Q8TEV9 937 aaPredicted RBP9.06□□□□□ -0.96
CCSER1-208ENST00000509109 ZNF333Q96JL9 665 aa9.06□□□□□ -0.96
CCSER1-208ENST00000509109 ZNF512BQ96KM6 892 aaPredicted RBP9.06□□□□□ -0.96
CCSER1-208ENST00000509109 OSBPL5Q9H0X9 879 aaPredicted RBP9.06□□□□□ -0.96
CCSER1-208ENST00000509109 DHX36Q9H2U1 1008 aaKnown RBP9.06□□□□□ -0.96
CCSER1-208ENST00000509109 CXXC1Q9P0U4 656 aaPredicted RBP9.06□□□□□ -0.96
CCSER1-208ENST00000509109 ZFATQ9P243 1243 aa9.06□□□□□ -0.96
CCSER1-208ENST00000509109 HERC5Q9UII4 1024 aaKnown RBP9.06□□□□□ -0.96
CCSER1-208ENST00000509109 TNNQ9UQP3 1299 aa9.06□□□□□ -0.96
CCSER1-208ENST00000509109 PTCH2Q9Y6C5 1203 aa9.06□□□□□ -0.96
CCSER1-208ENST00000509109 ADGRA2Q96PE1 1338 aa9.05□□□□□ -0.96
CCSER1-208ENST00000509109 DDTLA6NHG4 134 aaPredicted RBP9.05□□□□□ -0.96
CCSER1-208ENST00000509109 FCGRTP55899 365 aa9.05□□□□□ -0.96
CCSER1-208ENST00000509109 ATP8B2P98198 1209 aa9.05□□□□□ -0.96
CCSER1-208ENST00000509109 PABPC4Q13310 644 aaKnown RBP eCLIP9.05□□□□□ -0.96
CCSER1-208ENST00000509109 SLC4A8Q2Y0W8 1093 aa9.05□□□□□ -0.96
CCSER1-208ENST00000509109 HSP90AB4PQ58FF6 505 aa9.05□□□□□ -0.96
CCSER1-208ENST00000509109 C17orf99Q6UX52 265 aa9.05□□□□□ -0.96
CCSER1-208ENST00000509109 ZFPM1Q8IX07 1006 aa9.05□□□□□ -0.96
CCSER1-208ENST00000509109 CMTR1Q8N1G2 835 aaKnown RBP9.05□□□□□ -0.96
CCSER1-208ENST00000509109 GCC1Q96CN9 775 aa9.05□□□□□ -0.96
CCSER1-208ENST00000509109 CHMP4BQ9H444 224 aaKnown RBP9.05□□□□□ -0.96
CCSER1-208ENST00000509109 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.05□□□□□ -0.96
CCSER1-208ENST00000509109 JPH1Q9HDC5 661 aaPredicted RBP9.05□□□□□ -0.96
CCSER1-208ENST00000509109 DDX4Q9NQI0 724 aaKnown RBP9.05□□□□□ -0.96
CCSER1-208ENST00000509109 CPA4Q9UI42 421 aa9.05□□□□□ -0.96
CCSER1-208ENST00000509109 NOP58Q9Y2X3 529 aaKnown RBP9.05□□□□□ -0.96
CCSER1-208ENST00000509109 CEP290O15078 2479 aa9.05□□□□□ -0.96
CCSER1-208ENST00000509109 MYPNQ86TC9 1320 aa9.05□□□□□ -0.96
CCSER1-208ENST00000509109 MYO5AQ9Y4I1 1855 aaKnown RBP9.04□□□□□ -0.96
CCSER1-208ENST00000509109 TRIM75PA6NK02 468 aa9.04□□□□□ -0.96
CCSER1-208ENST00000509109 PSMC4P43686 418 aa9.04□□□□□ -0.96
CCSER1-208ENST00000509109 C16orf46Q6P387 395 aa9.04□□□□□ -0.96
CCSER1-208ENST00000509109 GADL1Q6ZQY3 521 aa9.04□□□□□ -0.96
CCSER1-208ENST00000509109 CCDC82Q8N4S0 544 aa9.04□□□□□ -0.96
CCSER1-208ENST00000509109 RAET1EQ8TD07 263 aa9.04□□□□□ -0.96
CCSER1-208ENST00000509109 ZNF384Q8TF68 577 aa9.04□□□□□ -0.96
CCSER1-208ENST00000509109 DBNDD2Q9BQY9 259 aa9.04□□□□□ -0.96
CCSER1-208ENST00000509109 C1orf115Q9H7X2 142 aa9.04□□□□□ -0.96
CCSER1-208ENST00000509109 AS3MTQ9HBK9 375 aa9.04□□□□□ -0.96
CCSER1-208ENST00000509109 AATFQ9NY61 560 aaKnown RBP eCLIP9.04□□□□□ -0.96
CCSER1-208ENST00000509109 PI4KBQ9UBF8 816 aa9.04□□□□□ -0.96
CCSER1-208ENST00000509109 NAGPAQ9UK23 515 aa9.04□□□□□ -0.96
CCSER1-208ENST00000509109 AGTPBP1Q9UPW5 1226 aa9.04□□□□□ -0.96
CCSER1-208ENST00000509109 AFG3L2Q9Y4W6 797 aa9.04□□□□□ -0.96
CCSER1-208ENST00000509109 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.04□□□□□ -0.96
CCSER1-208ENST00000509109 MYH1P12882 1939 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 SIPA1L1O43166 1804 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 LILRB5O75023 590 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 HMMRO75330 724 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 HLA-DOAP06340 250 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 ASNSP08243 561 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 RARAP10276 462 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 NID1P14543 1247 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 CPB1P15086 417 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 MOGSQ13724 837 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 FAM26DQ5JW98 314 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 PSAPL1Q6NUJ1 521 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 CEP85Q6P2H3 762 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 ETFBKMTQ8IXQ9 262 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 CRACR2BQ8N4Y2 399 aaPredicted RBP9.03□□□□□ -0.96
CCSER1-208ENST00000509109 ARHGAP39Q9C0H5 1083 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 GINM1Q9NU53 330 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 SRRDQ9UH36 339 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 DBNLQ9UJU6 430 aaKnown RBP9.03□□□□□ -0.96
CCSER1-208ENST00000509109 FLT1P17948 1338 aa9.03□□□□□ -0.96
CCSER1-208ENST00000509109 NAV1Q8NEY1 1877 aa9.02□□□□□ -0.96
CCSER1-208ENST00000509109 SPDYE3A6NKU9 549 aa9.02□□□□□ -0.97
CCSER1-208ENST00000509109 TNPO2O14787 897 aaKnown RBP9.02□□□□□ -0.97
CCSER1-208ENST00000509109 IDH1O75874 414 aaKnown RBP9.02□□□□□ -0.97
CCSER1-208ENST00000509109 CYP2E1P05181 493 aaPredicted RBP9.02□□□□□ -0.97
CCSER1-208ENST00000509109 SPATA31C1P0DKV0 1188 aa9.02□□□□□ -0.97
CCSER1-208ENST00000509109 CYP2C8P10632 490 aa9.02□□□□□ -0.97
CCSER1-208ENST00000509109 RLBP1P12271 317 aa9.02□□□□□ -0.97
CCSER1-208ENST00000509109 GRK4P32298 578 aa9.02□□□□□ -0.97
CCSER1-208ENST00000509109 CAP2P40123 477 aa9.02□□□□□ -0.97
CCSER1-208ENST00000509109 UBXN2AP68543 259 aa9.02□□□□□ -0.97
CCSER1-208ENST00000509109 CAP1Q01518 475 aa9.02□□□□□ -0.97
CCSER1-208ENST00000509109 MAP3K12Q12852 859 aa9.02□□□□□ -0.97
CCSER1-208ENST00000509109 FAM110CQ1W6H9 321 aa9.02□□□□□ -0.97
CCSER1-208ENST00000509109 PRRT3Q5FWE3 981 aa9.02□□□□□ -0.97
CCSER1-208ENST00000509109 DHX32Q7L7V1 743 aaKnown RBP9.02□□□□□ -0.97
CCSER1-208ENST00000509109 HOMEZQ8IX15 550 aa9.02□□□□□ -0.97
CCSER1-208ENST00000509109 SH3RF3Q8TEJ3 882 aaPredicted RBP9.02□□□□□ -0.97
CCSER1-208ENST00000509109 SH3TC2Q8TF17 1288 aa9.02□□□□□ -0.97
CCSER1-208ENST00000509109 PRDM6Q9NQX0 595 aa9.02□□□□□ -0.97
CCSER1-208ENST00000509109 DDX19BQ9UMR2 479 aa9.02□□□□□ -0.97
CCSER1-208ENST00000509109 ZBTB42B2RXF5 422 aa9.01□□□□□ -0.97
CCSER1-208ENST00000509109 CAPN2P17655 700 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms