RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 CCDC62Q6P9F0 684 aa14.58□□□□□ -0.08
PDPN-208ENST00000509009 NSUN6Q8TEA1 469 aaKnown RBP14.58□□□□□ -0.08
PDPN-208ENST00000509009 MTMR8Q96EF0 704 aa14.58□□□□□ -0.08
PDPN-208ENST00000509009 MTG1Q9BT17 334 aaPredicted RBP14.58□□□□□ -0.08
PDPN-208ENST00000509009 NOC4LQ9BVI4 516 aaKnown RBP14.58□□□□□ -0.08
PDPN-208ENST00000509009 ALDH8A1Q9H2A2 487 aaPredicted RBP14.58□□□□□ -0.08
PDPN-208ENST00000509009 HIPK3Q9H422 1215 aa14.58□□□□□ -0.08
PDPN-208ENST00000509009 GPHNQ9NQX3 736 aaPredicted RBP14.58□□□□□ -0.08
PDPN-208ENST00000509009 MAD2L2Q9UI95 211 aa14.58□□□□□ -0.08
PDPN-208ENST00000509009 U3KPZ7 1027 aaPredicted RBP14.58□□□□□ -0.08
PDPN-208ENST00000509009 UMODL1Q5DID0 1318 aa14.58□□□□□ -0.08
PDPN-208ENST00000509009 PALM3A6NDB9 673 aaPredicted RBP14.57□□□□□ -0.08
PDPN-208ENST00000509009 DLL1O00548 723 aa14.57□□□□□ -0.08
PDPN-208ENST00000509009 SGSM2O43147 1006 aa14.57□□□□□ -0.08
PDPN-208ENST00000509009 KPNA6O60684 536 aa14.57□□□□□ -0.08
PDPN-208ENST00000509009 TTLL4Q14679 1199 aa14.57□□□□□ -0.08
PDPN-208ENST00000509009 NBPF20Q3BBV1 942 aa14.57□□□□□ -0.08
PDPN-208ENST00000509009 BRDTQ58F21 947 aaPredicted RBP14.57□□□□□ -0.08
PDPN-208ENST00000509009 IWS1Q96ST2 819 aa14.57□□□□□ -0.08
PDPN-208ENST00000509009 RMDN3Q96TC7 470 aa14.57□□□□□ -0.08
PDPN-208ENST00000509009 TAF6LQ9Y6J9 622 aa14.57□□□□□ -0.08
PDPN-208ENST00000509009 TMEM265A0A087WTH1 108 aa14.56□□□□□ -0.08
PDPN-208ENST00000509009 GRXCR1A8MXD5 290 aa14.56□□□□□ -0.08
PDPN-208ENST00000509009 E7EWF7 191 aa14.56□□□□□ -0.08
PDPN-208ENST00000509009 OPLAHO14841 1288 aa14.56□□□□□ -0.08
PDPN-208ENST00000509009 IFIT3O14879 490 aaKnown RBP14.56□□□□□ -0.08
PDPN-208ENST00000509009 PPP1R11O60927 126 aaPredicted RBP14.56□□□□□ -0.08
PDPN-208ENST00000509009 FGBP02675 491 aa14.56□□□□□ -0.08
PDPN-208ENST00000509009 SUPT20HL2P0C7V6 817 aa14.56□□□□□ -0.08
PDPN-208ENST00000509009 CCL23P55773 120 aa14.56□□□□□ -0.08
PDPN-208ENST00000509009 STXBP2Q15833 593 aa14.56□□□□□ -0.08
PDPN-208ENST00000509009 SLC35G1Q2M3R5 365 aa14.56□□□□□ -0.08
PDPN-208ENST00000509009 PSRC1Q6PGN9 363 aaPredicted RBP14.56□□□□□ -0.08
PDPN-208ENST00000509009 SEPT14Q6ZU15 432 aa14.56□□□□□ -0.08
PDPN-208ENST00000509009 MYLIPQ8WY64 445 aa14.56□□□□□ -0.08
PDPN-208ENST00000509009 HERVK_113Q902F9 699 aa14.56□□□□□ -0.08
PDPN-208ENST00000509009 MAP4K1Q92918 833 aa14.56□□□□□ -0.08
PDPN-208ENST00000509009 AMNQ9BXJ7 453 aa14.56□□□□□ -0.08
PDPN-208ENST00000509009 SENP2Q9HC62 589 aa14.56□□□□□ -0.08
PDPN-208ENST00000509009 TRMT13Q9NUP7 481 aaKnown RBP14.56□□□□□ -0.08
PDPN-208ENST00000509009 LRRC37A2A6NM11 1700 aa14.55□□□□□ -0.08
PDPN-208ENST00000509009 ZBTB5O15062 677 aa14.55□□□□□ -0.08
PDPN-208ENST00000509009 CFBP00751 764 aa14.55□□□□□ -0.08
PDPN-208ENST00000509009 NR3C2P08235 984 aa14.55□□□□□ -0.08
PDPN-208ENST00000509009 CYP2C9P11712 490 aa14.55□□□□□ -0.08
PDPN-208ENST00000509009 DNAJB2P25686 324 aa14.55□□□□□ -0.08
PDPN-208ENST00000509009 HSD17B4P51659 736 aa14.55□□□□□ -0.08
PDPN-208ENST00000509009 GRM4Q14833 912 aa14.55□□□□□ -0.08
PDPN-208ENST00000509009 LY6KQ17RY6 165 aa14.55□□□□□ -0.08
PDPN-208ENST00000509009 STOX1Q6ZVD7 989 aa14.55□□□□□ -0.08
PDPN-208ENST00000509009 VWCEQ96DN2 955 aa14.55□□□□□ -0.08
PDPN-208ENST00000509009 WNT8AQ9H1J5 351 aa14.55□□□□□ -0.08
PDPN-208ENST00000509009 RIOX1Q9H6W3 641 aa14.55□□□□□ -0.08
PDPN-208ENST00000509009 PCDHA1Q9Y5I3 950 aa14.55□□□□□ -0.08
PDPN-208ENST00000509009 LAMA4Q16363 1823 aa14.55□□□□□ -0.08
PDPN-208ENST00000509009 EIF3JO75822 258 aaKnown RBP14.54□□□□□ -0.08
PDPN-208ENST00000509009 GHRHRQ02643 423 aa14.54□□□□□ -0.08
PDPN-208ENST00000509009 ARHGAP1Q07960 439 aa14.54□□□□□ -0.08
PDPN-208ENST00000509009 TROAPQ12815 778 aa14.54□□□□□ -0.08
PDPN-208ENST00000509009 GRIN2CQ14957 1233 aa14.54□□□□□ -0.08
PDPN-208ENST00000509009 ARHGEF16Q5VV41 709 aa14.54□□□□□ -0.08
PDPN-208ENST00000509009 NFRKBQ6P4R8 1299 aa14.54□□□□□ -0.08
PDPN-208ENST00000509009 CHST3Q7LGC8 479 aa14.54□□□□□ -0.08
PDPN-208ENST00000509009 RPUSD2Q8IZ73 545 aaKnown RBP14.54□□□□□ -0.08
PDPN-208ENST00000509009 NCOA7Q8NI08 942 aa14.54□□□□□ -0.08
PDPN-208ENST00000509009 IGDCC4Q8TDY8 1250 aa14.54□□□□□ -0.08
PDPN-208ENST00000509009 PPP1R13LQ8WUF5 828 aa14.54□□□□□ -0.08
PDPN-208ENST00000509009 AFG1LQ8WV93 481 aa14.54□□□□□ -0.08
PDPN-208ENST00000509009 TIFAQ96CG3 184 aa14.54□□□□□ -0.08
PDPN-208ENST00000509009 ZNF576Q9H609 170 aa14.54□□□□□ -0.08
PDPN-208ENST00000509009 PXMP2Q9NR77 195 aa14.54□□□□□ -0.08
PDPN-208ENST00000509009 MAP3K20Q9NYL2 800 aaKnown RBP14.54□□□□□ -0.08
PDPN-208ENST00000509009 CXXC1Q9P0U4 656 aaPredicted RBP14.54□□□□□ -0.08
PDPN-208ENST00000509009 DDX41Q9UJV9 622 aaKnown RBP14.54□□□□□ -0.08
PDPN-208ENST00000509009 CHD9Q3L8U1 2897 aa14.53□□□□□ -0.08
PDPN-208ENST00000509009 ERICH2A1L162 156 aa14.53□□□□□ -0.08
PDPN-208ENST00000509009 GH1P01241 217 aa14.53□□□□□ -0.08
PDPN-208ENST00000509009 EIF2AK2P19525 551 aaKnown RBP14.53□□□□□ -0.08
PDPN-208ENST00000509009 PBX2P40425 430 aa14.53□□□□□ -0.08
PDPN-208ENST00000509009 PTPN11Q06124 597 aaPredicted RBP14.53□□□□□ -0.08
PDPN-208ENST00000509009 WTAPQ15007 396 aa14.53□□□□□ -0.08
PDPN-208ENST00000509009 FAM47CQ5HY64 1035 aa14.53□□□□□ -0.08
PDPN-208ENST00000509009 OTOP2Q7RTS6 562 aa14.53□□□□□ -0.08
PDPN-208ENST00000509009 RALYLQ86SE5 291 aaKnown RBP14.53□□□□□ -0.08
PDPN-208ENST00000509009 SAMD3Q8N6K7 520 aa14.53□□□□□ -0.08
PDPN-208ENST00000509009 SCLYQ96I15 445 aa14.53□□□□□ -0.08
PDPN-208ENST00000509009 PIGSQ96S52 555 aa14.53□□□□□ -0.08
PDPN-208ENST00000509009 PBX4Q9BYU1 374 aa14.53□□□□□ -0.08
PDPN-208ENST00000509009 CYTH3O43739 400 aa14.52□□□□□ -0.09
PDPN-208ENST00000509009 ANTXR2P58335 489 aa14.52□□□□□ -0.09
PDPN-208ENST00000509009 TRAF1Q13077 416 aa14.52□□□□□ -0.09
PDPN-208ENST00000509009 TMEM67Q5HYA8 995 aa14.52□□□□□ -0.09
PDPN-208ENST00000509009 VSIG10LQ86VR7 867 aa14.52□□□□□ -0.09
PDPN-208ENST00000509009 MAFAQ8NHW3 353 aaPredicted RBP14.52□□□□□ -0.09
PDPN-208ENST00000509009 PDCD2LQ9BRP1 358 aa14.52□□□□□ -0.09
PDPN-208ENST00000509009 RBM8AQ9Y5S9 174 aaKnown RBP14.52□□□□□ -0.09
PDPN-208ENST00000509009 UNC80Q8N2C7 3258 aa14.52□□□□□ -0.09
PDPN-208ENST00000509009 PNMA6FA0A0J9YX94 578 aa14.51□□□□□ -0.09
PDPN-208ENST00000509009 RGS20O76081 388 aa14.51□□□□□ -0.09
PDPN-208ENST00000509009 MMP3P08254 477 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms