RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 GLI3P10071 1580 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 RHPN2P1A8MT19 583 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 SWSAP1Q6NVH7 229 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 LEKR1Q6ZMV7 388 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 CEP128Q6ZU80 1094 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 FCHSD1Q86WN1 690 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 CCDC144CPQ8IYA2 1237 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 ZNF527Q8NB42 609 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 HSPH1Q92598 858 aa4.36□□□□□ -1.71
NEDD4-209ENST00000508871 PRKAR2BP31323 418 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 L1CAMP32004 1257 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 KIF11P52732 1056 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 PRSS12P56730 875 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 SNX1Q13596 522 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 RPS6KA2Q15349 733 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 TAF5Q15542 800 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 AMOTQ4VCS5 1084 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 POTEDQ86YR6 584 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 COG1Q8WTW3 980 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 TAF4BQ92750 862 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 ARHGEF2Q92974 986 aaKnown RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 RILPL2Q969X0 211 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 PRDM5Q9NQX1 630 aaPredicted RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 NRBP1Q9UHY1 535 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 CEMIPQ8WUJ3 1361 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 ANKRD36CQ5JPF3 1778 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 ARFGEF2Q9Y6D5 1785 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 PTPRCP08575 1304 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 MAP3K19Q56UN5 1328 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 TNFRSF10BO14763 440 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 RIMBP2O15034 1052 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 OFD1O75665 1012 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 TP53P04637 393 aaPredicted RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 CES1P23141 567 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 ST5P78524 1137 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 NUCB2P80303 420 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 SLC12A1Q13621 1099 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 ZC3H12BQ5HYM0 836 aaKnown RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 VPS53Q5VIR6 699 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 KIF6Q6ZMV9 814 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 MCM10Q7L590 875 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 MTERF4Q7Z6M4 381 aaKnown RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 SEPT8Q92599 483 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 MAP3K14Q99558 947 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 PDGFDQ9GZP0 370 aaPredicted RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 CPA4Q9UI42 421 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 CFAP45Q9UL16 551 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 JAG2Q9Y219 1238 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 LAMB2P55268 1798 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 E2F8A0AVK6 867 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 GOLGA8AA7E2F4 631 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 GOLGA8BA8MQT2 603 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 HOXB7P09629 217 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 MAP2K1Q02750 393 aaPredicted RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 RAVER1Q8IY67 606 aaKnown RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 RFWD2Q8NHY2 731 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 AVENQ9NQS1 362 aaPredicted RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 DACH1Q9UI36 760 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 CAPN7Q9Y6W3 813 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 KDM4FA0A1W2PPD8 638 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 POU2F2P09086 479 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 TOP1P11387 765 aaKnown RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 COG2Q14746 738 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 WTAPQ15007 396 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 P3H1Q32P28 736 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 BNC2Q6ZN30 1099 aaPredicted RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 DDX53Q86TM3 631 aaKnown RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 CCDC117Q8IWD4 279 aaPredicted RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 CCDC110Q8TBZ0 833 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 NSUN6Q8TEA1 469 aaKnown RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 KIFC2Q96AC6 838 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 NUCKS1Q9H1E3 243 aaKnown RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 VEZTQ9HBM0 779 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 NMRK2Q9NPI5 230 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 CDC23Q9UJX2 597 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 TOGARAM1Q9Y4F4 1720 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 AFDNP55196 1824 aaKnown RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 HNRNPCL2B2RXH8 293 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 H0Y3Z8 333 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 CTAGE5O15320 804 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 TMCC2O75069 709 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 KRT38O76015 456 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 ALDH1A1P00352 501 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 GSTT1P30711 240 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 ATP6V1AP38606 617 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 CDKN1CP49918 316 aaPredicted RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 RACK1P63244 317 aaKnown RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 OCRLQ01968 901 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 MAP7Q14244 749 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 NAA25Q14CX7 972 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 PHLDB3Q6NSJ2 640 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 CAVIN1Q6NZI2 390 aaKnown RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 C6orf15Q6UXA7 325 aaPredicted RBP4.35□□□□□ -1.71
NEDD4-209ENST00000508871 CAPN12Q6ZSI9 719 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 DGKHQ86XP1 1220 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 PHACTR4Q8IZ21 702 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 TBC1D5Q92609 795 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 IFT43Q96FT9 208 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 CFAP57Q96MR6 1250 aa4.35□□□□□ -1.71
NEDD4-209ENST00000508871 NLRP3Q96P20 1036 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms