RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 CCDC39Q9UFE4 941 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 MAN1B1Q9UKM7 699 aa9.01□□□□□ -0.97
NR1I3-226ENST00000508740 SCAF8Q9UPN6 1271 aaKnown RBP9.01□□□□□ -0.97
NR1I3-226ENST00000508740 SMTNL1A8MU46 457 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 NEMFO60524 1076 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 PLA2G6O60733 806 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 SMC2O95347 1197 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 TXLNAP40222 546 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 SNAP25P60880 206 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 IKQ13123 557 aaPredicted RBP9□□□□□ -0.97
NR1I3-226ENST00000508740 UBE2SQ16763 222 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 KIF4BQ2VIQ3 1234 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 EAPPQ56P03 285 aaPredicted RBP9□□□□□ -0.97
NR1I3-226ENST00000508740 ISM2Q6H9L7 571 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 PDXDC2PQ6P474 469 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 SARM1Q6SZW1 724 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 FBXO11Q86XK2 927 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 GRAMD1CQ8IYS0 662 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 AOPEPQ8N6M6 819 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 TRIML1Q8N9V2 468 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 SPATA20Q8TB22 786 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 CHURC1Q8WUH1 139 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 SMARCE1Q969G3 411 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 AK8Q96MA6 479 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 MTMR9Q96QG7 549 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 CCSER1Q9C0I3 900 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 DEFB129Q9H1M3 183 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 PRR12Q9ULL5 1215 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 ABT1Q9ULW3 272 aaKnown RBP9□□□□□ -0.97
NR1I3-226ENST00000508740 THSD7BQ9C0I4 1608 aa9□□□□□ -0.97
NR1I3-226ENST00000508740 ASTN2O75129 1339 aaPredicted RBP9□□□□□ -0.97
NR1I3-226ENST00000508740 USP17L15C9J2P7 530 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 USP17L13C9JLJ4 530 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 USP17L11C9JVI0 530 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 USP17L18D6R9N7 530 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 USP17L22D6RA61 530 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 USP17L17D6RBQ6 530 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 USP17L19D6RCP7 530 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 USP17L20D6RJB6 530 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 IKBKBO14920 756 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 CTNND1O60716 968 aaKnown RBP8.99□□□□□ -0.97
NR1I3-226ENST00000508740 PTMAP06454 111 aaKnown RBP8.99□□□□□ -0.97
NR1I3-226ENST00000508740 LMOD1P29536 600 aaPredicted RBP8.99□□□□□ -0.97
NR1I3-226ENST00000508740 CDC25AP30304 524 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 MAP2K2P36507 400 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 UBA7P41226 1012 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 AFMP43652 599 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 USP11P51784 963 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 ZNF75DP51815 510 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 STAT2P52630 851 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 USP17L24Q0WX57 530 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 DPYDQ12882 1025 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 TRAF1Q13077 416 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 MORC3Q14149 939 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 NCAPHQ15003 741 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 FAM83BQ5T0W9 1011 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 RRAGBQ5VZM2 374 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 MCTP2Q6DN12 878 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 PPP4R3AQ6IN85 833 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 USP17L6PQ6QN14 398 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 FAM160B2Q86V87 743 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 PLA2G4DQ86XP0 818 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 TEX2Q8IWB9 1127 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 FAM43AQ8N2R8 423 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 MLKLQ8NB16 471 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 NAP1L4Q99733 375 aaKnown RBP8.99□□□□□ -0.97
NR1I3-226ENST00000508740 GLIS2Q9BZE0 524 aaPredicted RBP8.99□□□□□ -0.97
NR1I3-226ENST00000508740 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.99□□□□□ -0.97
NR1I3-226ENST00000508740 MYH8P13535 1937 aa8.99□□□□□ -0.97
NR1I3-226ENST00000508740 CYP3A7-CYP3A51PA0A087WV96 503 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 PP2D1A8MPX8 630 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 ESPNB1AK53 854 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 MEIS2O14770 477 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 SLC37A4O43826 429 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 TDP2O95551 362 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 BMP6P22004 513 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 OSBPP22059 807 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 CYP3A7P24462 503 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 TECP42680 631 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 TPM4P67936 248 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 AP3B2Q13367 1082 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 KARSQ15046 597 aaKnown RBP8.98□□□□□ -0.97
NR1I3-226ENST00000508740 CALCRLQ16602 461 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 CT47A1Q5JQC4 288 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-226ENST00000508740 NBPF12Q5TAG4 269 aaPredicted RBP8.98□□□□□ -0.97
NR1I3-226ENST00000508740 DCAF15Q66K64 600 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 CABP7Q86V35 215 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 ZSCAN30Q86W11 494 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 APOBEC3FQ8IUX4 373 aaKnown RBP8.98□□□□□ -0.97
NR1I3-226ENST00000508740 GPIHBP1Q8IV16 184 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 TRPM4Q8TD43 1214 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 KHSRPQ92945 711 aaKnown RBP eCLIP8.98□□□□□ -0.97
NR1I3-226ENST00000508740 HHIPL1Q96JK4 782 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 ZNF341Q9BYN7 854 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 ANO3Q9BYT9 981 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 TRIM5Q9C035 493 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 RANBP17Q9H2T7 1088 aaKnown RBP8.98□□□□□ -0.97
NR1I3-226ENST00000508740 DISC1Q9NRI5 854 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 GPRC5DQ9NZD1 345 aa8.98□□□□□ -0.97
NR1I3-226ENST00000508740 DACH1Q9UI36 760 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms