RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, humanhuman

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-208ENST00000508492 LINC00528Q8N1L1 170 aa9.32□□□□□ -0.92
SH3D19-208ENST00000508492 KBTBD3Q8NAB2 608 aa9.32□□□□□ -0.92
SH3D19-208ENST00000508492 EXOC6Q8TAG9 804 aa9.32□□□□□ -0.92
SH3D19-208ENST00000508492 RAET1EQ8TD07 263 aa9.32□□□□□ -0.92
SH3D19-208ENST00000508492 SHISA4Q96DD7 197 aa9.32□□□□□ -0.92
SH3D19-208ENST00000508492 RBCK1Q9BYM8 510 aa9.32□□□□□ -0.92
SH3D19-208ENST00000508492 GRIP2Q9C0E4 1043 aa9.32□□□□□ -0.92
SH3D19-208ENST00000508492 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.32□□□□□ -0.92
SH3D19-208ENST00000508492 TMOD4Q9NZQ9 345 aa9.32□□□□□ -0.92
SH3D19-208ENST00000508492 BRPF3Q9ULD4 1205 aa9.32□□□□□ -0.92
SH3D19-208ENST00000508492 SLC4A4Q9Y6R1 1079 aa9.32□□□□□ -0.92
SH3D19-208ENST00000508492 LCE2BO14633 110 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 TNPO2O14787 897 aaKnown RBP9.31□□□□□ -0.92
SH3D19-208ENST00000508492 CNMDO75829 334 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 VCAM1P19320 739 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 EIF1AXP47813 144 aaKnown RBP9.31□□□□□ -0.92
SH3D19-208ENST00000508492 HERVK_113P62684 666 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 IRX6P78412 446 aaPredicted RBP9.31□□□□□ -0.92
SH3D19-208ENST00000508492 IRX3P78415 501 aaPredicted RBP9.31□□□□□ -0.92
SH3D19-208ENST00000508492 FAM110CQ1W6H9 321 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 ANKRD45Q5TZF3 282 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 C12orf60Q5U649 245 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 CCDC129Q6ZRS4 1044 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 CERS3Q8IU89 383 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 SIAH1Q8IUQ4 282 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 STRBPQ96SI9 672 aaKnown RBP9.31□□□□□ -0.92
SH3D19-208ENST00000508492 FEZ1Q99689 392 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 PAGR1Q9BTK6 254 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 PHACTR1Q9C0D0 580 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 PORCNQ9H237 461 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 LRFN2Q9ULH4 789 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 ZNF236Q9UL36 1845 aa9.31□□□□□ -0.92
SH3D19-208ENST00000508492 GSG1L2A8MUP6 293 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 C19orf81C9J6K1 198 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 RNF113AO15541 343 aaKnown RBP9.3□□□□□ -0.92
SH3D19-208ENST00000508492 GPAA1O43292 621 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 ADCY3O60266 1144 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 IGHDP01880 384 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 MX1P20591 662 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 HOXA7P31268 230 aaPredicted RBP9.3□□□□□ -0.92
SH3D19-208ENST00000508492 GRK4P32298 578 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 CDK8P49336 464 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 AAMPQ13685 434 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 HIF1AQ16665 826 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 C11orf91Q3C1V1 193 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 CTR9Q6PD62 1173 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 TMED8Q6PL24 325 aaPredicted RBP9.3□□□□□ -0.92
SH3D19-208ENST00000508492 APPBP2Q92624 585 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 C12orf42Q96LP6 360 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 INSM2Q96T92 566 aaPredicted RBP9.3□□□□□ -0.92
SH3D19-208ENST00000508492 LNPKQ9C0E8 428 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 RPAP3Q9H6T3 665 aaPredicted RBP9.3□□□□□ -0.92
SH3D19-208ENST00000508492 POLMQ9NP87 494 aaPredicted RBP9.3□□□□□ -0.92
SH3D19-208ENST00000508492 RBPJLQ9UBG7 517 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 MORF4L1Q9UBU8 362 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 HCN4Q9Y3Q4 1203 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 LCTP09848 1927 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 TTC41PQ6P2S7 1318 aa9.3□□□□□ -0.92
SH3D19-208ENST00000508492 MYH6P13533 1939 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 SPATA31C2B4DYI2 1134 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 FOXP2O15409 715 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 CCL5P13501 91 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 GCLCP48506 637 aaPredicted RBP9.29□□□□□ -0.92
SH3D19-208ENST00000508492 PRMT2P55345 433 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 PABPC4Q13310 644 aaKnown RBP eCLIP9.29□□□□□ -0.92
SH3D19-208ENST00000508492 HDAC1Q13547 482 aaPredicted RBP9.29□□□□□ -0.92
SH3D19-208ENST00000508492 ARHGEF6Q15052 776 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 SH3PXD2AQ5TCZ1 1133 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 C16orf86Q6ZW13 317 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 GPATCH3Q96I76 525 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 KIAA1683Q9H0B3 1180 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 CABP5Q9NP86 173 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 ATP8A2Q9NTI2 1148 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 GINM1Q9NU53 330 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 ZDHHC3Q9NYG2 299 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 BTBD7Q9P203 1132 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 GJD2Q9UKL4 321 aa9.29□□□□□ -0.92
SH3D19-208ENST00000508492 SUPT16HQ9Y5B9 1047 aaKnown RBP9.29□□□□□ -0.92
SH3D19-208ENST00000508492 GPC6Q9Y625 555 aaPredicted RBP9.29□□□□□ -0.92
SH3D19-208ENST00000508492 CEP290O15078 2479 aa9.28□□□□□ -0.92
SH3D19-208ENST00000508492 ROBO3Q96MS0 1386 aa9.28□□□□□ -0.92
SH3D19-208ENST00000508492 MINDY4BA8MYZ0 360 aa9.28□□□□□ -0.92
SH3D19-208ENST00000508492 GLRX3O76003 335 aaKnown RBP9.28□□□□□ -0.92
SH3D19-208ENST00000508492 ZNF16P17020 682 aaPredicted RBP9.28□□□□□ -0.92
SH3D19-208ENST00000508492 HOXD10P28358 340 aa9.28□□□□□ -0.92
SH3D19-208ENST00000508492 PLA2G4AP47712 749 aa9.28□□□□□ -0.92
SH3D19-208ENST00000508492 ERVK-24P63145 666 aa9.28□□□□□ -0.92
SH3D19-208ENST00000508492 ZSCAN25Q6NSZ9 544 aa9.28□□□□□ -0.92
SH3D19-208ENST00000508492 TMEM179Q6ZVK1 233 aa9.28□□□□□ -0.92
SH3D19-208ENST00000508492 NBPF11Q86T75 865 aa9.28□□□□□ -0.92
SH3D19-208ENST00000508492 SPICE1Q8N0Z3 855 aa9.28□□□□□ -0.92
SH3D19-208ENST00000508492 GIPC2Q8TF65 315 aa9.28□□□□□ -0.92
SH3D19-208ENST00000508492 FSD1Q9BTV5 496 aa9.28□□□□□ -0.92
SH3D19-208ENST00000508492 SWAP70Q9UH65 585 aa9.28□□□□□ -0.92
SH3D19-208ENST00000508492 TACC3Q9Y6A5 838 aa9.28□□□□□ -0.92
SH3D19-208ENST00000508492 PRDM1O75626 825 aa9.27□□□□□ -0.93
SH3D19-208ENST00000508492 CYP2B6P20813 491 aa9.27□□□□□ -0.93
SH3D19-208ENST00000508492 PDE1AP54750 535 aa9.27□□□□□ -0.93
SH3D19-208ENST00000508492 ATP2B2Q01814 1243 aa9.27□□□□□ -0.93
SH3D19-208ENST00000508492 ICA1Q05084 483 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms