RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 TCERG1LQ5VWI1 586 aa7.47□□□□□ -1.21
UBE2D3-225ENST00000508476 DENND5AQ6IQ26 1287 aa7.47□□□□□ -1.21
UBE2D3-225ENST00000508476 CNKSR3Q6P9H4 555 aa7.47□□□□□ -1.21
UBE2D3-225ENST00000508476 TEX2Q8IWB9 1127 aa7.47□□□□□ -1.21
UBE2D3-225ENST00000508476 KREMEN2Q8NCW0 462 aa7.47□□□□□ -1.21
UBE2D3-225ENST00000508476 PLEKHO2Q8TD55 490 aa7.47□□□□□ -1.21
UBE2D3-225ENST00000508476 KCNJ6P48051 423 aa7.46□□□□□ -1.22
UBE2D3-225ENST00000508476 AFF3P51826 1226 aaKnown RBP7.46□□□□□ -1.22
UBE2D3-225ENST00000508476 DDR2Q16832 855 aa7.46□□□□□ -1.22
UBE2D3-225ENST00000508476 NAALADL2Q58DX5 795 aa7.46□□□□□ -1.22
UBE2D3-225ENST00000508476 WWC2Q6AWC2 1192 aa7.46□□□□□ -1.22
UBE2D3-225ENST00000508476 EEPD1Q7L9B9 569 aa7.46□□□□□ -1.22
UBE2D3-225ENST00000508476 CABP7Q86V35 215 aa7.46□□□□□ -1.22
UBE2D3-225ENST00000508476 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.46□□□□□ -1.225e-8■■■□□ 16.6
UBE2D3-225ENST00000508476 FBXL7Q9UJT9 491 aa7.46□□□□□ -1.22
UBE2D3-225ENST00000508476 R3HCC1Q9Y3T6 440 aaKnown RBP7.46□□□□□ -1.22
UBE2D3-225ENST00000508476 CAPNS1P04632 268 aa7.45□□□□□ -1.22
UBE2D3-225ENST00000508476 ASGR2P07307 311 aa7.45□□□□□ -1.22
UBE2D3-225ENST00000508476 INHBBP09529 407 aa7.45□□□□□ -1.22
UBE2D3-225ENST00000508476 BMP7P18075 431 aa7.45□□□□□ -1.22
UBE2D3-225ENST00000508476 PMLP29590 882 aa7.45□□□□□ -1.22
UBE2D3-225ENST00000508476 HOXC12P31275 282 aa7.45□□□□□ -1.22
UBE2D3-225ENST00000508476 GFRA1P56159 465 aa7.45□□□□□ -1.22
UBE2D3-225ENST00000508476 TMEM145Q8NBT3 493 aa7.45□□□□□ -1.22
UBE2D3-225ENST00000508476 NETO2Q8NC67 525 aa7.45□□□□□ -1.22
UBE2D3-225ENST00000508476 ALG3Q92685 438 aa7.45□□□□□ -1.22
UBE2D3-225ENST00000508476 PWWP2AQ96N64 755 aa7.45□□□□□ -1.22
UBE2D3-225ENST00000508476 A0A1W2PQU0 124 aa7.44□□□□□ -1.22
UBE2D3-225ENST00000508476 TRIM13O60858 407 aa7.44□□□□□ -1.22
UBE2D3-225ENST00000508476 SCG5P05408 212 aa7.44□□□□□ -1.22
UBE2D3-225ENST00000508476 LCP1P13796 627 aa7.44□□□□□ -1.22
UBE2D3-225ENST00000508476 FPR2P25090 351 aa7.44□□□□□ -1.22
UBE2D3-225ENST00000508476 ZC3H6P61129 1189 aaKnown RBP7.44□□□□□ -1.22
UBE2D3-225ENST00000508476 PPP2R2AP63151 447 aa7.44□□□□□ -1.22
UBE2D3-225ENST00000508476 NLRP10Q86W26 655 aa7.44□□□□□ -1.22
UBE2D3-225ENST00000508476 C1orf159Q96HA4 380 aa7.44□□□□□ -1.22
UBE2D3-225ENST00000508476 C22orf46C9J442 243 aa7.43□□□□□ -1.22
UBE2D3-225ENST00000508476 PLA2G1BP04054 148 aaKnown RBP7.43□□□□□ -1.22
UBE2D3-225ENST00000508476 PFKLP17858 780 aa7.43□□□□□ -1.22
UBE2D3-225ENST00000508476 LCE1DQ5T752 114 aa7.43□□□□□ -1.22
UBE2D3-225ENST00000508476 PPIL6Q8IXY8 311 aa7.43□□□□□ -1.22
UBE2D3-225ENST00000508476 DIO2Q92813 273 aa7.43□□□□□ -1.22
UBE2D3-225ENST00000508476 TSPAN17Q96FV3 270 aa7.43□□□□□ -1.22
UBE2D3-225ENST00000508476 MEFVO15553 781 aaPredicted RBP7.42□□□□□ -1.22
UBE2D3-225ENST00000508476 BCL6P41182 706 aa7.42□□□□□ -1.22
UBE2D3-225ENST00000508476 FOXO4P98177 505 aa7.42□□□□□ -1.22
UBE2D3-225ENST00000508476 RAB33AQ14088 237 aa7.42□□□□□ -1.22
UBE2D3-225ENST00000508476 TARBP2Q15633 366 aaKnown RBP7.42□□□□□ -1.22
UBE2D3-225ENST00000508476 TTLL10Q6ZVT0 673 aa7.42□□□□□ -1.22
UBE2D3-225ENST00000508476 TMEM151BQ8IW70 566 aa7.42□□□□□ -1.22
UBE2D3-225ENST00000508476 RCBTB1Q8NDN9 531 aa7.42□□□□□ -1.22
UBE2D3-225ENST00000508476 PEX11GQ96HA9 241 aa7.42□□□□□ -1.22
UBE2D3-225ENST00000508476 NUDT5Q9UKK9 219 aa7.42□□□□□ -1.22
UBE2D3-225ENST00000508476 TIMM13Q9Y5L4 95 aaPredicted RBP7.42□□□□□ -1.22
UBE2D3-225ENST00000508476 KRTAP9-7A8MTY7 169 aa7.41□□□□□ -1.22
UBE2D3-225ENST00000508476 NCAM1P13591 858 aa7.41□□□□□ -1.22
UBE2D3-225ENST00000508476 RPL11P62913 178 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-225ENST00000508476 SLC35F1Q5T1Q4 408 aa7.41□□□□□ -1.22
UBE2D3-225ENST00000508476 E4F1Q66K89 784 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-225ENST00000508476 CEP68Q76N32 757 aa7.41□□□□□ -1.22
UBE2D3-225ENST00000508476 ADGRG2Q8IZP9 1017 aa7.41□□□□□ -1.22
UBE2D3-225ENST00000508476 MARCH10Q8NA82 808 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-225ENST00000508476 TP53I13Q8NBR0 393 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-225ENST00000508476 KCNC2Q96PR1 638 aa7.41□□□□□ -1.22
UBE2D3-225ENST00000508476 SYT3Q9BQG1 590 aa7.41□□□□□ -1.22
UBE2D3-225ENST00000508476 RNF38Q9H0F5 515 aa7.41□□□□□ -1.22
UBE2D3-225ENST00000508476 EPN3Q9H201 632 aa7.41□□□□□ -1.22
UBE2D3-225ENST00000508476 FFAR3O14843 346 aa7.4□□□□□ -1.22
UBE2D3-225ENST00000508476 SGSM2O43147 1006 aa7.4□□□□□ -1.22
UBE2D3-225ENST00000508476 CPP00450 1065 aa7.4□□□□□ -1.22
UBE2D3-225ENST00000508476 KCNAB2Q13303 367 aa7.4□□□□□ -1.22
UBE2D3-225ENST00000508476 ACBD5Q5T8D3 534 aaPredicted RBP7.4□□□□□ -1.22
UBE2D3-225ENST00000508476 IQCEQ6IPM2 695 aa7.4□□□□□ -1.22
UBE2D3-225ENST00000508476 CCDC140Q96MF4 163 aa7.4□□□□□ -1.22
UBE2D3-225ENST00000508476 IER2Q9BTL4 223 aa7.4□□□□□ -1.22
UBE2D3-225ENST00000508476 ZCCHC4Q9H5U6 513 aa7.4□□□□□ -1.22
UBE2D3-225ENST00000508476 PARD6AQ9NPB6 346 aa7.4□□□□□ -1.22
UBE2D3-225ENST00000508476 FAN1Q9Y2M0 1017 aa7.4□□□□□ -1.22
UBE2D3-225ENST00000508476 PCDHA2Q9Y5H9 948 aa7.4□□□□□ -1.22
UBE2D3-225ENST00000508476 A0A1B0GTL3 188 aa7.39□□□□□ -1.23
UBE2D3-225ENST00000508476 AGRPO00253 132 aa7.39□□□□□ -1.23
UBE2D3-225ENST00000508476 DLX3O60479 287 aa7.39□□□□□ -1.23
UBE2D3-225ENST00000508476 HOXA5P20719 270 aa7.39□□□□□ -1.23
UBE2D3-225ENST00000508476 LTBRP36941 435 aa7.39□□□□□ -1.23
UBE2D3-225ENST00000508476 TESK1Q15569 626 aa7.39□□□□□ -1.23
UBE2D3-225ENST00000508476 VWA3BQ502W6 1294 aa7.39□□□□□ -1.23
UBE2D3-225ENST00000508476 SYT8Q8NBV8 401 aa7.39□□□□□ -1.23
UBE2D3-225ENST00000508476 SMARCC2Q8TAQ2 1214 aa7.39□□□□□ -1.23
UBE2D3-225ENST00000508476 FNIP1Q8TF40 1166 aa7.39□□□□□ -1.23
UBE2D3-225ENST00000508476 C20orf173Q96LM9 149 aa7.39□□□□□ -1.23
UBE2D3-225ENST00000508476 NOX5Q96PH1 765 aa7.39□□□□□ -1.23
UBE2D3-225ENST00000508476 ARHGEF4Q9NR80 690 aa7.39□□□□□ -1.23
UBE2D3-225ENST00000508476 STK10O94804 968 aaKnown RBP7.38□□□□□ -1.23
UBE2D3-225ENST00000508476 SLC9A5Q14940 896 aa7.38□□□□□ -1.23
UBE2D3-225ENST00000508476 YOD1Q5VVQ6 348 aaPredicted RBP7.38□□□□□ -1.23
UBE2D3-225ENST00000508476 B3GNT8Q7Z7M8 397 aa7.38□□□□□ -1.23
UBE2D3-225ENST00000508476 DCP2Q8IU60 420 aaKnown RBP7.38□□□□□ -1.23
UBE2D3-225ENST00000508476 Q8N1Y9 231 aa7.38□□□□□ -1.23
UBE2D3-225ENST00000508476 FEZF2Q8TBJ5 459 aa7.38□□□□□ -1.23
UBE2D3-225ENST00000508476 TRMT2BQ96GJ1 504 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms