RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 CNNM4Q6P4Q7 775 aa2.55□□□□□ -2
SMN2-208ENST00000508258 ASXL2Q76L83 1435 aa2.55□□□□□ -2
SMN2-208ENST00000508258 MAMDC2Q7Z304 686 aaPredicted RBP2.55□□□□□ -2
SMN2-208ENST00000508258 TMC3Q7Z5M5 1100 aa2.55□□□□□ -2
SMN2-208ENST00000508258 TSPYL5Q86VY4 417 aaPredicted RBP2.55□□□□□ -2
SMN2-208ENST00000508258 OXR1Q8N573 874 aa2.55□□□□□ -2
SMN2-208ENST00000508258 FBXO15Q8NCQ5 510 aaPredicted RBP2.55□□□□□ -2
SMN2-208ENST00000508258 ENOX1Q8TC92 643 aaKnown RBP2.55□□□□□ -2
SMN2-208ENST00000508258 ORAI3Q9BRQ5 295 aa2.55□□□□□ -2
SMN2-208ENST00000508258 MCMBPQ9BTE3 642 aa2.55□□□□□ -2
SMN2-208ENST00000508258 DUSP15Q9H1R2 295 aaPredicted RBP2.55□□□□□ -2
SMN2-208ENST00000508258 C19orf44Q9H6X5 657 aa2.55□□□□□ -2
SMN2-208ENST00000508258 KCNK12Q9HB15 430 aa2.55□□□□□ -2
SMN2-208ENST00000508258 C19orf73Q9NVV2 129 aa2.55□□□□□ -2
SMN2-208ENST00000508258 GFOD1Q9NXC2 390 aa2.55□□□□□ -2
SMN2-208ENST00000508258 NDOR1Q9UHB4 597 aa2.55□□□□□ -2
SMN2-208ENST00000508258 GPR160Q9UJ42 338 aa2.55□□□□□ -2
SMN2-208ENST00000508258 MCM8Q9UJA3 840 aa2.55□□□□□ -2
SMN2-208ENST00000508258 FBXL21Q9UKT6 434 aa2.55□□□□□ -2
SMN2-208ENST00000508258 G3BP2Q9UN86 482 aaKnown RBP2.55□□□□□ -2
SMN2-208ENST00000508258 FAN1Q9Y2M0 1017 aa2.55□□□□□ -2
SMN2-208ENST00000508258 PCDHA11Q9Y5I1 949 aa2.55□□□□□ -2
SMN2-208ENST00000508258 TNPO3Q9Y5L0 923 aaKnown RBP2.55□□□□□ -2
SMN2-208ENST00000508258 NPFFR2Q9Y5X5 522 aa2.55□□□□□ -2
SMN2-208ENST00000508258 TCAF2A6NFQ2 919 aa2.54□□□□□ -2
SMN2-208ENST00000508258 H0Y8X5 98 aa2.54□□□□□ -2
SMN2-208ENST00000508258 FKTNO75072 461 aa2.54□□□□□ -2
SMN2-208ENST00000508258 PRAMEF1O95521 474 aa2.54□□□□□ -2
SMN2-208ENST00000508258 CRTAMO95727 393 aa2.54□□□□□ -2
SMN2-208ENST00000508258 SNRPB2P08579 225 aaKnown RBP2.54□□□□□ -2
SMN2-208ENST00000508258 C1QTNF9P0C862 333 aa2.54□□□□□ -2
SMN2-208ENST00000508258 CPEP16870 476 aa2.54□□□□□ -2
SMN2-208ENST00000508258 RPL10P27635 214 aaKnown RBP2.54□□□□□ -2
SMN2-208ENST00000508258 IGFALSP35858 605 aa2.54□□□□□ -2
SMN2-208ENST00000508258 PDE6BP35913 854 aa2.54□□□□□ -2
SMN2-208ENST00000508258 CTSKP43235 329 aa2.54□□□□□ -2
SMN2-208ENST00000508258 AMPD2Q01433 879 aa2.54□□□□□ -2
SMN2-208ENST00000508258 MESP2Q0VG99 397 aa2.54□□□□□ -2
SMN2-208ENST00000508258 DUSP4Q13115 394 aa2.54□□□□□ -2
SMN2-208ENST00000508258 ZNF460Q14592 562 aa2.54□□□□□ -2
SMN2-208ENST00000508258 PPP2R5DQ14738 602 aa2.54□□□□□ -2
SMN2-208ENST00000508258 SEPT7Q16181 437 aaKnown RBP2.54□□□□□ -2
SMN2-208ENST00000508258 PRSS53Q2L4Q9 553 aa2.54□□□□□ -2
SMN2-208ENST00000508258 ACBD5Q5T8D3 534 aaPredicted RBP2.54□□□□□ -2
SMN2-208ENST00000508258 PKN3Q6P5Z2 889 aa2.54□□□□□ -2
SMN2-208ENST00000508258 RSPO2Q6UXX9 243 aaPredicted RBP2.54□□□□□ -2
SMN2-208ENST00000508258 NECAB2Q7Z6G3 386 aa2.54□□□□□ -2
SMN2-208ENST00000508258 SIRT2Q8IXJ6 389 aa2.54□□□□□ -2
SMN2-208ENST00000508258 ATL2Q8NHH9 583 aa2.54□□□□□ -2
SMN2-208ENST00000508258 NPLOC4Q8TAT6 608 aa2.54□□□□□ -2
SMN2-208ENST00000508258 ZSCAN18Q8TBC5 510 aaPredicted RBP2.54□□□□□ -2
SMN2-208ENST00000508258 FRS2Q8WU20 508 aa2.54□□□□□ -2
SMN2-208ENST00000508258 DCAF4Q8WV16 495 aa2.54□□□□□ -2
SMN2-208ENST00000508258 LEO1Q8WVC0 666 aaPredicted RBP2.54□□□□□ -2
SMN2-208ENST00000508258 JDP2Q8WYK2 163 aa2.54□□□□□ -2
SMN2-208ENST00000508258 KCNN1Q92952 543 aa2.54□□□□□ -2
SMN2-208ENST00000508258 MAGEB10Q96LZ2 347 aaPredicted RBP2.54□□□□□ -2
SMN2-208ENST00000508258 ZDHHC15Q96MV8 337 aa2.54□□□□□ -2
SMN2-208ENST00000508258 CEP89Q96ST8 783 aa2.54□□□□□ -2
SMN2-208ENST00000508258 HDAC8Q9BY41 377 aa2.54□□□□□ -2
SMN2-208ENST00000508258 GPR62Q9BZJ7 368 aa2.54□□□□□ -2
SMN2-208ENST00000508258 RNF32Q9H0A6 362 aa2.54□□□□□ -2
SMN2-208ENST00000508258 CHST7Q9NS84 486 aa2.54□□□□□ -2
SMN2-208ENST00000508258 GPR55Q9Y2T6 319 aaPredicted RBP2.54□□□□□ -2
SMN2-208ENST00000508258 SF3B6Q9Y3B4 125 aaKnown RBP2.54□□□□□ -2
SMN2-208ENST00000508258 TRAF6Q9Y4K3 522 aa2.54□□□□□ -2
SMN2-208ENST00000508258 SHISA3A0PJX4 238 aa2.53□□□□□ -2
SMN2-208ENST00000508258 FITM1A5D6W6 292 aa2.53□□□□□ -2
SMN2-208ENST00000508258 B4E1Z4 1266 aa2.53□□□□□ -2
SMN2-208ENST00000508258 NPIPB6E9PJ23 425 aa2.53□□□□□ -2
SMN2-208ENST00000508258 MEIS1O00470 390 aa2.53□□□□□ -2
SMN2-208ENST00000508258 AQP7O14520 342 aa2.53□□□□□ -2
SMN2-208ENST00000508258 AURKAO14965 403 aa2.53□□□□□ -2
SMN2-208ENST00000508258 GPR39O43194 453 aa2.53□□□□□ -2
SMN2-208ENST00000508258 OPA1O60313 960 aa2.53□□□□□ -2
SMN2-208ENST00000508258 BRINP1O60477 761 aa2.53□□□□□ -2
SMN2-208ENST00000508258 ALDH1L1O75891 902 aa2.53□□□□□ -2
SMN2-208ENST00000508258 RASGRP1O95267 797 aa2.53□□□□□ -2
SMN2-208ENST00000508258 TSPAN15O95858 294 aa2.53□□□□□ -2
SMN2-208ENST00000508258 HPXP02790 462 aa2.53□□□□□ -2
SMN2-208ENST00000508258 GSNP06396 782 aa2.53□□□□□ -2
SMN2-208ENST00000508258 THBDP07204 575 aa2.53□□□□□ -2
SMN2-208ENST00000508258 JMJD7P0C870 316 aa2.53□□□□□ -2
SMN2-208ENST00000508258 BPIP17213 487 aa2.53□□□□□ -2
SMN2-208ENST00000508258 ECI1P42126 302 aa2.53□□□□□ -2
SMN2-208ENST00000508258 KCNJ6P48051 423 aa2.53□□□□□ -2
SMN2-208ENST00000508258 GUCY2FP51841 1108 aa2.53□□□□□ -2
SMN2-208ENST00000508258 NEK4P51957 841 aa2.53□□□□□ -2
SMN2-208ENST00000508258 POU4F1Q01851 419 aa2.53□□□□□ -2
SMN2-208ENST00000508258 SCRN1Q12765 414 aa2.53□□□□□ -2
SMN2-208ENST00000508258 STRN3Q13033 797 aa2.53□□□□□ -2
SMN2-208ENST00000508258 NMIQ13287 307 aaPredicted RBP2.53□□□□□ -2
SMN2-208ENST00000508258 FAM50AQ14320 339 aaKnown RBP2.53□□□□□ -2
SMN2-208ENST00000508258 STAT4Q14765 748 aa2.53□□□□□ -2
SMN2-208ENST00000508258 SLC14A2Q15849 920 aa2.53□□□□□ -2
SMN2-208ENST00000508258 NFE2Q16621 373 aaPredicted RBP2.53□□□□□ -2
SMN2-208ENST00000508258 GAB4Q2WGN9 574 aa2.53□□□□□ -2
SMN2-208ENST00000508258 CFAP100Q494V2 611 aa2.53□□□□□ -2
SMN2-208ENST00000508258 HSP90AB2PQ58FF8 381 aa2.53□□□□□ -2
SMN2-208ENST00000508258 RNF219Q5W0B1 726 aaPredicted RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms