RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 DDX4Q9NQI0 724 aaKnown RBP6.88□□□□□ -1.31
ATXN3-210ENST00000507965 USP40Q9NVE5 1235 aa6.88□□□□□ -1.31
ATXN3-210ENST00000507965 SRRDQ9UH36 339 aa6.88□□□□□ -1.31
ATXN3-210ENST00000507965 MYH8P13535 1937 aa6.88□□□□□ -1.31
ATXN3-210ENST00000507965 DDTLA6NHG4 134 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-210ENST00000507965 F8W735 103 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-210ENST00000507965 GSC2O15499 205 aa6.87□□□□□ -1.31
ATXN3-210ENST00000507965 SASH3O75995 380 aa6.87□□□□□ -1.31
ATXN3-210ENST00000507965 CIAO1O76071 339 aa6.87□□□□□ -1.31
ATXN3-210ENST00000507965 TAL1P17542 331 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-210ENST00000507965 GRNP28799 593 aaKnown RBP6.87□□□□□ -1.31
ATXN3-210ENST00000507965 GRK4P32298 578 aa6.87□□□□□ -1.31
ATXN3-210ENST00000507965 PRMT2P55345 433 aa6.87□□□□□ -1.31
ATXN3-210ENST00000507965 PI16Q6UXB8 463 aa6.87□□□□□ -1.31
ATXN3-210ENST00000507965 GADL1Q6ZQY3 521 aa6.87□□□□□ -1.31
ATXN3-210ENST00000507965 UBE2Q1Q7Z7E8 422 aa6.87□□□□□ -1.31
ATXN3-210ENST00000507965 SCYL3Q8IZE3 742 aa6.87□□□□□ -1.31
ATXN3-210ENST00000507965 RAET1EQ8TD07 263 aa6.87□□□□□ -1.31
ATXN3-210ENST00000507965 ZNF384Q8TF68 577 aa6.87□□□□□ -1.31
ATXN3-210ENST00000507965 PARK7Q99497 189 aaKnown RBP6.87□□□□□ -1.31
ATXN3-210ENST00000507965 HINFPQ9BQA5 517 aa6.87□□□□□ -1.31
ATXN3-210ENST00000507965 TRAIPQ9BWF2 469 aa6.87□□□□□ -1.31
ATXN3-210ENST00000507965 COL2A1P02458 1487 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-210ENST00000507965 MROH7-TTC4A0A0A0MT08 1334 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 A0A0G2JLL6 359 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-210ENST00000507965 TRIM75PA6NK02 468 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 DKK1O94907 266 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 PTPRAP18433 802 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 RASA1P20936 1047 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 BTDP43251 543 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 GJA8P48165 433 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 ARSDP51689 593 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 GP2P55259 537 aaKnown RBP6.86□□□□□ -1.31
ATXN3-210ENST00000507965 FCGRTP55899 365 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 ALDH1L2Q3SY69 923 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 TREML2Q5T2D2 321 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 PRRT2Q7Z6L0 340 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-210ENST00000507965 DZIP1Q86YF9 867 aaKnown RBP6.86□□□□□ -1.31
ATXN3-210ENST00000507965 ZSCAN29Q8IWY8 852 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-210ENST00000507965 IDI2Q9BXS1 227 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 RNF208Q9H0X6 261 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 C11orf16Q9NQ32 467 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 ABCF2Q9UG63 623 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 DENND2AQ9ULE3 1009 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 NOB1Q9ULX3 412 aaKnown RBP6.86□□□□□ -1.31
ATXN3-210ENST00000507965 TNNQ9UQP3 1299 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 RAXQ9Y2V3 346 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 ZHX2Q9Y6X8 837 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 A0A0G2JMZ2 1700 aa6.86□□□□□ -1.31
ATXN3-210ENST00000507965 LTBP2Q14767 1821 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 PARP14Q460N5 1801 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 SZT2Q5T011 3432 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 PDS5AQ29RF7 1337 aaKnown RBP6.85□□□□□ -1.31
ATXN3-210ENST00000507965 A0A1B0GUL7 405 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 POM121CA8CG34 1229 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 ENTPD3O75355 529 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 FARP2O94887 1054 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-210ENST00000507965 IGLV1-40P01703 118 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 GJB1P08034 283 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 GLB1P16278 677 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 IL15P40933 162 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-210ENST00000507965 NRLP54845 237 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 RHBDL3P58872 404 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 TIMM10P62072 90 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 MECOMQ03112 1051 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 TFCP2Q12800 502 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 GDF6Q6KF10 455 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-210ENST00000507965 ADAMTS19Q8TE59 1207 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 U2AF1L4Q8WU68 220 aaKnown RBP6.85□□□□□ -1.31
ATXN3-210ENST00000507965 DPF3Q92784 378 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 UCN2Q96RP3 112 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 SRA1Q9HD15 236 aaKnown RBP6.85□□□□□ -1.31
ATXN3-210ENST00000507965 PICK1Q9NRD5 415 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 GNL3LQ9NVN8 582 aaKnown RBP6.85□□□□□ -1.31
ATXN3-210ENST00000507965 KLK14Q9P0G3 267 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 BIN2Q9UBW5 565 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-210ENST00000507965 AFG3L2Q9Y4W6 797 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 RNF114Q9Y508 228 aa6.85□□□□□ -1.31
ATXN3-210ENST00000507965 OAS3Q9Y6K5 1087 aaKnown RBP6.85□□□□□ -1.31
ATXN3-210ENST00000507965 CXCL11O14625 94 aa6.84□□□□□ -1.31
ATXN3-210ENST00000507965 TNPO2O14787 897 aaKnown RBP6.84□□□□□ -1.31
ATXN3-210ENST00000507965 ADCY3O60266 1144 aa6.84□□□□□ -1.31
ATXN3-210ENST00000507965 FLT3LGP49771 235 aa6.84□□□□□ -1.31
ATXN3-210ENST00000507965 UBXN2AP68543 259 aa6.84□□□□□ -1.31
ATXN3-210ENST00000507965 RRP1BQ14684 758 aaKnown RBP6.84□□□□□ -1.31
ATXN3-210ENST00000507965 SHROOM1Q2M3G4 852 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-210ENST00000507965 TRMT2AQ8IZ69 625 aaKnown RBP6.84□□□□□ -1.31
ATXN3-210ENST00000507965 IL22RA1Q8N6P7 574 aa6.84□□□□□ -1.31
ATXN3-210ENST00000507965 ANKRD13CQ8N6S4 541 aa6.84□□□□□ -1.31
ATXN3-210ENST00000507965 SMCR8Q8TEV9 937 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-210ENST00000507965 DIS3LQ8TF46 1054 aaKnown RBP6.84□□□□□ -1.31
ATXN3-210ENST00000507965 GLMNQ92990 594 aa6.84□□□□□ -1.31
ATXN3-210ENST00000507965 PLD4Q96BZ4 506 aa6.84□□□□□ -1.31
ATXN3-210ENST00000507965 PRO3102Q9H379 93 aa6.84□□□□□ -1.31
ATXN3-210ENST00000507965 COPRSQ9NQ92 184 aa6.84□□□□□ -1.31
ATXN3-210ENST00000507965 HMG20BQ9P0W2 317 aa6.84□□□□□ -1.31
ATXN3-210ENST00000507965 STOML1Q9UBI4 398 aa6.84□□□□□ -1.31
ATXN3-210ENST00000507965 AGTPBP1Q9UPW5 1226 aa6.84□□□□□ -1.31
ATXN3-210ENST00000507965 TRIOBPQ9H2D6 2365 aa6.84□□□□□ -1.31
ATXN3-210ENST00000507965 CEP290O15078 2479 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms