RNA–Protein interactions for RNA: ENST00000507905.6

SMN1-206, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 431 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-206ENST00000507905 ADAM7Q9H2U9 754 aa8.49□□□□□ -1.05
SMN1-206ENST00000507905 FUCA1P04066 466 aa8.48□□□□□ -1.05
SMN1-206ENST00000507905 ATF4P18848 351 aaPredicted RBP8.48□□□□□ -1.05
SMN1-206ENST00000507905 SAPCD2Q86UD0 394 aa8.48□□□□□ -1.05
SMN1-206ENST00000507905 ADGRG2Q8IZP9 1017 aa8.48□□□□□ -1.05
SMN1-206ENST00000507905 ZNF526Q8TF50 670 aaPredicted RBP8.48□□□□□ -1.05
SMN1-206ENST00000507905 MMP19Q99542 508 aa8.48□□□□□ -1.05
SMN1-206ENST00000507905 A0A1B0GTL3 188 aa8.47□□□□□ -1.05
SMN1-206ENST00000507905 NTRK1P04629 796 aa8.47□□□□□ -1.05
SMN1-206ENST00000507905 LCE5AQ5TCM9 118 aa8.47□□□□□ -1.05
SMN1-206ENST00000507905 LIPIQ6XZB0 460 aa8.47□□□□□ -1.05
SMN1-206ENST00000507905 CPA5Q8WXQ8 436 aa8.47□□□□□ -1.05
SMN1-206ENST00000507905 CYP26B1Q9NR63 512 aa8.47□□□□□ -1.05
SMN1-206ENST00000507905 CELA3BP08861 270 aa8.46□□□□□ -1.06
SMN1-206ENST00000507905 MBLAC2Q68D91 279 aa8.46□□□□□ -1.06
SMN1-206ENST00000507905 GTF2IRD2BQ6EKJ0 949 aa8.46□□□□□ -1.06
SMN1-206ENST00000507905 GTF2IRD2Q86UP8 949 aa8.46□□□□□ -1.06
SMN1-206ENST00000507905 VPS37DQ86XT2 251 aa8.46□□□□□ -1.06
SMN1-206ENST00000507905 SMARCC2Q8TAQ2 1214 aa8.46□□□□□ -1.06
SMN1-206ENST00000507905 KRTAP4-11Q9BYQ6 195 aa8.46□□□□□ -1.06
SMN1-206ENST00000507905 MARCH2Q9P0N8 246 aa8.46□□□□□ -1.06
SMN1-206ENST00000507905 SH3D21A4FU49 640 aa8.45□□□□□ -1.06
SMN1-206ENST00000507905 THBDP07204 575 aa8.45□□□□□ -1.06
SMN1-206ENST00000507905 CACNB2Q08289 660 aaPredicted RBP8.45□□□□□ -1.06
SMN1-206ENST00000507905 SKOR2Q2VWA4 1001 aaPredicted RBP8.45□□□□□ -1.06
SMN1-206ENST00000507905 TRIM59Q8IWR1 403 aa8.45□□□□□ -1.06
SMN1-206ENST00000507905 PLEKHO2Q8TD55 490 aa8.45□□□□□ -1.06
SMN1-206ENST00000507905 DPF3Q92784 378 aa8.45□□□□□ -1.06
SMN1-206ENST00000507905 SPATA25Q9BR10 227 aa8.45□□□□□ -1.06
SMN1-206ENST00000507905 CAPN10Q9HC96 672 aa8.45□□□□□ -1.06
SMN1-206ENST00000507905 SIT1Q9Y3P8 196 aa8.45□□□□□ -1.06
SMN1-206ENST00000507905 MRVI1Q9Y6F6 885 aa8.45□□□□□ -1.06
SMN1-206ENST00000507905 NT5DC1Q5TFE4 455 aa8.44□□□□□ -1.06
SMN1-206ENST00000507905 MRGPRX3Q96LB0 322 aa8.44□□□□□ -1.06
SMN1-206ENST00000507905 LGR4Q9BXB1 951 aa8.44□□□□□ -1.06
SMN1-206ENST00000507905 NKX2-4Q9H2Z4 354 aa8.44□□□□□ -1.06
SMN1-206ENST00000507905 USP40Q9NVE5 1235 aa8.44□□□□□ -1.06
SMN1-206ENST00000507905 BTG4Q9NY30 223 aa8.44□□□□□ -1.06
SMN1-206ENST00000507905 SMAD7O15105 426 aaKnown RBP8.43□□□□□ -1.06
SMN1-206ENST00000507905 SSBP05455 408 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMN1-206ENST00000507905 DLX2Q07687 328 aaPredicted RBP8.43□□□□□ -1.06
SMN1-206ENST00000507905 IQCEQ6IPM2 695 aa8.43□□□□□ -1.06
SMN1-206ENST00000507905 DCP2Q8IU60 420 aaKnown RBP8.43□□□□□ -1.06
SMN1-206ENST00000507905 NOX5Q96PH1 765 aa8.43□□□□□ -1.06
SMN1-206ENST00000507905 KRTAP9-3Q9BYQ3 159 aa8.43□□□□□ -1.06
SMN1-206ENST00000507905 AP5M1Q9H0R1 490 aa8.43□□□□□ -1.06
SMN1-206ENST00000507905 INF2Q27J81 1249 aa8.42□□□□□ -1.06
SMN1-206ENST00000507905 SV2CQ496J9 727 aa8.42□□□□□ -1.06
SMN1-206ENST00000507905 C6orf15Q6UXA7 325 aaPredicted RBP8.42□□□□□ -1.06
SMN1-206ENST00000507905 TEX2Q8IWB9 1127 aa8.42□□□□□ -1.06
SMN1-206ENST00000507905 CARFQ8N187 725 aa8.42□□□□□ -1.06
SMN1-206ENST00000507905 FRS2Q8WU20 508 aa8.42□□□□□ -1.06
SMN1-206ENST00000507905 ZBTB8AQ96BR9 441 aa8.42□□□□□ -1.06
SMN1-206ENST00000507905 DDX11Q96FC9 970 aa8.42□□□□□ -1.06
SMN1-206ENST00000507905 ACTR10Q9NZ32 417 aa8.42□□□□□ -1.06
SMN1-206ENST00000507905 LRP2BPQ9P2M1 347 aa8.42□□□□□ -1.06
SMN1-206ENST00000507905 C22orf46C9J442 243 aa8.41□□□□□ -1.06
SMN1-206ENST00000507905 HOXC12P31275 282 aa8.41□□□□□ -1.06
SMN1-206ENST00000507905 PLP2Q04941 152 aa8.41□□□□□ -1.06
SMN1-206ENST00000507905 RTP5Q14D33 572 aa8.41□□□□□ -1.06
SMN1-206ENST00000507905 TNNI3KQ59H18 835 aa8.41□□□□□ -1.06
SMN1-206ENST00000507905 ZFYVE27Q5T4F4 411 aa8.41□□□□□ -1.06
SMN1-206ENST00000507905 LARP1BQ659C4 914 aaKnown RBP8.41□□□□□ -1.06
SMN1-206ENST00000507905 TTLL7Q6ZT98 887 aa8.41□□□□□ -1.06
SMN1-206ENST00000507905 PRRT2Q7Z6L0 340 aaPredicted RBP8.41□□□□□ -1.06
SMN1-206ENST00000507905 FAM178BQ8IXR5 827 aa8.41□□□□□ -1.06
SMN1-206ENST00000507905 NTMQ9P121 344 aa8.41□□□□□ -1.06
SMN1-206ENST00000507905 TIMM13Q9Y5L4 95 aaPredicted RBP8.41□□□□□ -1.06
SMN1-206ENST00000507905 PRICKLE3O43900 615 aaPredicted RBP8.4□□□□□ -1.06
SMN1-206ENST00000507905 CYP2C8P10632 490 aa8.4□□□□□ -1.06
SMN1-206ENST00000507905 ERCC5P28715 1186 aaPredicted RBP8.4□□□□□ -1.06
SMN1-206ENST00000507905 SARSP49591 514 aaKnown RBP8.4□□□□□ -1.06
SMN1-206ENST00000507905 CYP4F3Q08477 520 aa8.4□□□□□ -1.06
SMN1-206ENST00000507905 UBXN11Q5T124 520 aa8.4□□□□□ -1.06
SMN1-206ENST00000507905 ETV3LQ6ZN32 361 aa8.4□□□□□ -1.06
SMN1-206ENST00000507905 NPLOC4Q8TAT6 608 aa8.4□□□□□ -1.06
SMN1-206ENST00000507905 BTN2A2Q8WVV5 523 aa8.4□□□□□ -1.06
SMN1-206ENST00000507905 BDH2Q9BUT1 245 aa8.4□□□□□ -1.06
SMN1-206ENST00000507905 SPATA6Q9NWH7 488 aaPredicted RBP8.4□□□□□ -1.06
SMN1-206ENST00000507905 SGSM2O43147 1006 aa8.39□□□□□ -1.07
SMN1-206ENST00000507905 DDAH1O94760 285 aa8.39□□□□□ -1.07
SMN1-206ENST00000507905 ITGAVP06756 1048 aa8.39□□□□□ -1.07
SMN1-206ENST00000507905 RPL11P62913 178 aaKnown RBP8.39□□□□□ -1.07
SMN1-206ENST00000507905 GNL2Q13823 731 aaKnown RBP8.39□□□□□ -1.07
SMN1-206ENST00000507905 E4F1Q66K89 784 aaPredicted RBP8.39□□□□□ -1.07
SMN1-206ENST00000507905 CEP68Q76N32 757 aa8.39□□□□□ -1.07
SMN1-206ENST00000507905 PCDH18Q9HCL0 1135 aa8.39□□□□□ -1.07
SMN1-206ENST00000507905 SMARCA5O60264 1052 aaPredicted RBP8.38□□□□□ -1.07
SMN1-206ENST00000507905 SNRPB2P08579 225 aaKnown RBP8.38□□□□□ -1.07
SMN1-206ENST00000507905 ECI1P42126 302 aa8.38□□□□□ -1.07
SMN1-206ENST00000507905 GTF2A2P52657 109 aa8.38□□□□□ -1.07
SMN1-206ENST00000507905 SMAD4Q13485 552 aaKnown RBP8.38□□□□□ -1.07
SMN1-206ENST00000507905 FERMT3Q86UX7 667 aa8.38□□□□□ -1.07
SMN1-206ENST00000507905 LINC00482Q8N8I6 264 aa8.38□□□□□ -1.07
SMN1-206ENST00000507905 SEC14L1Q92503 715 aa8.38□□□□□ -1.07
SMN1-206ENST00000507905 DIO2Q92813 273 aa8.38□□□□□ -1.07
SMN1-206ENST00000507905 CCDC140Q96MF4 163 aa8.38□□□□□ -1.07
SMN1-206ENST00000507905 PRKAG3Q9UGI9 489 aa8.38□□□□□ -1.07
SMN1-206ENST00000507905 TBX1O43435 398 aa8.37□□□□□ -1.07
SMN1-206ENST00000507905 MYO1BO43795 1136 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms