RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 ANAPC15P60006 121 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 IGBP1P78318 339 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 ZNF827Q17R98 1081 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 DPY19L1Q2PZI1 675 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 HSP90AB2PQ58FF8 381 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 RCSD1Q6JBY9 416 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 CCDC81Q6ZN84 652 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 CCAR1Q8IX12 1150 aaKnown RBP4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 CARFQ8N187 725 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 LZTR1Q8N653 840 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 RBBP8NLQ8NC74 664 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 SMARCC2Q8TAQ2 1214 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 ZCRB1Q8TBF4 217 aaKnown RBP4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 MICAL1Q8TDZ2 1067 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 RNF34Q969K3 372 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 TSPAN17Q96FV3 270 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 GPR20Q99678 358 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 UBA5Q9GZZ9 404 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 PRDM16Q9HAZ2 1276 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 FBLN5Q9UBX5 448 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 DIS3Q9Y2L1 958 aaKnown RBP4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 DUSP10Q9Y6W6 482 aa4.78□□□□□ -1.64
HMGB3P15-201ENST00000507326 hCG_2014768A0A024R1R8 64 aa4.77□□□□□ -1.65
HMGB3P15-201ENST00000507326 AURKAO14965 403 aa4.77□□□□□ -1.65
HMGB3P15-201ENST00000507326 NOBOXO60393 691 aa4.77□□□□□ -1.65
HMGB3P15-201ENST00000507326 GJA9P57773 515 aa4.77□□□□□ -1.65
HMGB3P15-201ENST00000507326 CNGB1Q14028 1251 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P15-201ENST00000507326 GNPTABQ3T906 1256 aa4.77□□□□□ -1.65
HMGB3P15-201ENST00000507326 NAALADL2Q58DX5 795 aa4.77□□□□□ -1.65
HMGB3P15-201ENST00000507326 EEF1DP3Q658K8 133 aa4.77□□□□□ -1.65
HMGB3P15-201ENST00000507326 CPNE8Q86YQ8 564 aa4.77□□□□□ -1.65
HMGB3P15-201ENST00000507326 HAUS7Q99871 368 aa4.77□□□□□ -1.65
HMGB3P15-201ENST00000507326 WHRNQ9P202 907 aa4.77□□□□□ -1.65
HMGB3P15-201ENST00000507326 PALD1Q9ULE6 856 aa4.77□□□□□ -1.65
HMGB3P15-201ENST00000507326 PPP1R11O60927 126 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 EIF3JO75822 258 aaKnown RBP4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 ZNF16P17020 682 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 VAMP1P23763 118 aa4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 SARSP49591 514 aaKnown RBP4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 SEPHS1P49903 392 aa4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 HEATR6Q6AI08 1181 aaKnown RBP4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 ADAT2Q7Z6V5 191 aaKnown RBP4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 NETO2Q8NC67 525 aa4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 ZBTB8AQ96BR9 441 aa4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 PEX11GQ96HA9 241 aa4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 FGD4Q96M96 766 aa4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 MTA3Q9BTC8 594 aa4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 BACH2Q9BYV9 841 aa4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 LNPKQ9C0E8 428 aa4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 KLHL25Q9H0H3 589 aa4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 GBP3Q9H0R5 595 aa4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 SPATA6Q9NWH7 488 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 KIAA1522Q9P206 1035 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 GULP1Q9UBP9 304 aa4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 NUDT5Q9UKK9 219 aa4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 CNOT11Q9UKZ1 510 aaKnown RBP4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 PCDHB10Q9UN67 800 aa4.76□□□□□ -1.65
HMGB3P15-201ENST00000507326 A0A0U1RQG5 324 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P15-201ENST00000507326 C2orf71A6NGG8 1288 aa4.75□□□□□ -1.65
HMGB3P15-201ENST00000507326 CENPBP07199 599 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P15-201ENST00000507326 FANCCQ00597 558 aa4.75□□□□□ -1.65
HMGB3P15-201ENST00000507326 CACNB2Q08289 660 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P15-201ENST00000507326 SMAD4Q13485 552 aaKnown RBP4.75□□□□□ -1.65
HMGB3P15-201ENST00000507326 USP33Q8TEY7 942 aa4.75□□□□□ -1.65
HMGB3P15-201ENST00000507326 DDX11Q96FC9 970 aa4.75□□□□□ -1.65
HMGB3P15-201ENST00000507326 PKNOX2Q96KN3 472 aa4.75□□□□□ -1.65
HMGB3P15-201ENST00000507326 CRBNQ96SW2 442 aa4.75□□□□□ -1.65
HMGB3P15-201ENST00000507326 MYRFQ9Y2G1 1151 aa4.75□□□□□ -1.65
HMGB3P15-201ENST00000507326 LAS1LQ9Y4W2 734 aaKnown RBP4.75□□□□□ -1.65
HMGB3P15-201ENST00000507326 BACE2Q9Y5Z0 518 aa4.75□□□□□ -1.65
HMGB3P15-201ENST00000507326 PPM1BO75688 479 aa4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 ITGB3P05106 788 aa4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 EPHX1P07099 455 aa4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 MAGEA10P43363 369 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 RACK1P63244 317 aaKnown RBP4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 AMPD2Q01433 879 aa4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 SLC9A5Q14940 896 aa4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 RALBP1Q15311 655 aa4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 WWC2Q6AWC2 1192 aa4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 TTLL7Q6ZT98 887 aa4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 ZNF761Q86XN6 746 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 GPATCH11Q8N954 259 aa4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 CPA5Q8WXQ8 436 aa4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 DNAJC2Q99543 621 aaKnown RBP4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 GINM1Q9NU53 330 aa4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 NTMQ9P121 344 aa4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 CGGBP1Q9UFW8 167 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 SIT1Q9Y3P8 196 aa4.74□□□□□ -1.65
HMGB3P15-201ENST00000507326 NPHP3-ACAD11A0A0J9YXS1 232 aa4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 ZBTB7AO95365 584 aa4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 C8BP07358 591 aa4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 HSP90AA1P07900 732 aaKnown RBP4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 PAMP19021 973 aa4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 MCCP23508 829 aa4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 EIF6P56537 245 aaKnown RBP4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 ADAM17P78536 824 aa4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 SLC7A5Q01650 507 aa4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 SPTY2D1Q68D10 685 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 TMED8Q6PL24 325 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P15-201ENST00000507326 ADAMTS17Q8TE56 1095 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms