RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 OSGEPQ9NPF4 335 aa8.54□□□□□ -1.04
NR1I3-224ENST00000507215 IFT57Q9NWB7 429 aa8.54□□□□□ -1.04
NR1I3-224ENST00000507215 NR2E3Q9Y5X4 410 aa8.54□□□□□ -1.04
NR1I3-224ENST00000507215 RANBP2P49792 3224 aaKnown RBP8.54□□□□□ -1.04
NR1I3-224ENST00000507215 HOXD10P28358 340 aa8.53□□□□□ -1.04
NR1I3-224ENST00000507215 TNNI2P48788 182 aa8.53□□□□□ -1.04
NR1I3-224ENST00000507215 NLRP12P59046 1061 aa8.53□□□□□ -1.04
NR1I3-224ENST00000507215 C19orf57Q0VDD7 668 aa8.53□□□□□ -1.04
NR1I3-224ENST00000507215 ADGRE1Q14246 886 aa8.53□□□□□ -1.04
NR1I3-224ENST00000507215 MBTPS1Q14703 1052 aa8.53□□□□□ -1.04
NR1I3-224ENST00000507215 SUZ12Q15022 739 aaKnown RBP8.53□□□□□ -1.04
NR1I3-224ENST00000507215 WDR43Q15061 677 aaKnown RBP eCLIP8.53□□□□□ -1.04
NR1I3-224ENST00000507215 TAF1CQ15572 869 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-224ENST00000507215 KRT24Q2M2I5 525 aa8.53□□□□□ -1.04
NR1I3-224ENST00000507215 KSR2Q6VAB6 950 aa8.53□□□□□ -1.04
NR1I3-224ENST00000507215 DTHD1Q6ZMT9 781 aa8.53□□□□□ -1.04
NR1I3-224ENST00000507215 ZNF804AQ7Z570 1209 aa8.53□□□□□ -1.04
NR1I3-224ENST00000507215 PLA2G12BQ9BX93 195 aa8.53□□□□□ -1.04
NR1I3-224ENST00000507215 NRSN2Q9GZP1 204 aa8.53□□□□□ -1.04
NR1I3-224ENST00000507215 CD209Q9NNX6 404 aa8.53□□□□□ -1.04
NR1I3-224ENST00000507215 SCAF8Q9UPN6 1271 aaKnown RBP8.53□□□□□ -1.04
NR1I3-224ENST00000507215 CSADQ9Y600 493 aa8.53□□□□□ -1.04
NR1I3-224ENST00000507215 SZT2Q5T011 3432 aa8.53□□□□□ -1.04
NR1I3-224ENST00000507215 C9orf172C9J069 976 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 H0YGN5 161 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 DLGAP3O95886 979 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 B3GALT4O96024 378 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 PROCP04070 461 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 CTSBP07858 339 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 CETPP11597 493 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 IL1R1P14778 569 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 KIAA1211Q6ZU35 1233 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 AGGF1Q8N302 714 aaeCLIP8.52□□□□□ -1.05
NR1I3-224ENST00000507215 OPTNQ96CV9 577 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 CLMNQ96JQ2 1002 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 TRIM56Q9BRZ2 755 aaKnown RBP8.52□□□□□ -1.05
NR1I3-224ENST00000507215 MYH16Q9H6N6 1097 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 GREM2Q9H772 168 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 AKAP2Q9Y2D5 859 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 A0A0C4DFX4 3053 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 SSC5DA1L4H1 1573 aa8.52□□□□□ -1.05
NR1I3-224ENST00000507215 CCL15-CCL14A0A0B4J2E2 113 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 TLR2O60603 784 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 USP2O75604 605 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-224ENST00000507215 ECEL1O95672 775 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 ZNF853P0CG23 659 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 NOS3P29474 1203 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 DAB2P98082 770 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 GSTM4Q03013 218 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 RASA3Q14644 834 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 CCL15Q16663 113 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 CFAP100Q494V2 611 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 SLC17A8Q8NDX2 589 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 GIPC2Q8TF65 315 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 ZNF428Q96B54 188 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 PTPN18Q99952 460 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 MXD3Q9BW11 206 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 STK31Q9BXU1 1019 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 SOX17Q9H6I2 414 aaPredicted RBP8.51□□□□□ -1.05
NR1I3-224ENST00000507215 PHAXQ9H814 394 aaKnown RBP8.51□□□□□ -1.05
NR1I3-224ENST00000507215 VEZTQ9HBM0 779 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 MAP3K2Q9Y2U5 619 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 PTCH2Q9Y6C5 1203 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 AK5Q9Y6K8 562 aa8.51□□□□□ -1.05
NR1I3-224ENST00000507215 ANKRD18BA2A2Z9 1011 aa8.5□□□□□ -1.05
NR1I3-224ENST00000507215 F8W735 103 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-224ENST00000507215 GIPC1O14908 333 aa8.5□□□□□ -1.05
NR1I3-224ENST00000507215 FBXO24O75426 580 aa8.5□□□□□ -1.05
NR1I3-224ENST00000507215 USP17L7P0C7H9 530 aa8.5□□□□□ -1.05
NR1I3-224ENST00000507215 LACTBP83111 547 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-224ENST00000507215 RPS26P11Q5JNZ5 115 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-224ENST00000507215 NBPF12Q5TAG4 269 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-224ENST00000507215 GPAT2Q6NUI2 795 aa8.5□□□□□ -1.05
NR1I3-224ENST00000507215 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.5□□□□□ -1.05
NR1I3-224ENST00000507215 TXNRD3Q86VQ6 643 aa8.5□□□□□ -1.05
NR1I3-224ENST00000507215 RGS22Q8NE09 1264 aa8.5□□□□□ -1.05
NR1I3-224ENST00000507215 WFDC12Q8WWY7 111 aa8.5□□□□□ -1.05
NR1I3-224ENST00000507215 DPF3Q92784 378 aa8.5□□□□□ -1.05
NR1I3-224ENST00000507215 NACC1Q96RE7 527 aa8.5□□□□□ -1.05
NR1I3-224ENST00000507215 MYBBP1AQ9BQG0 1328 aaKnown RBP8.5□□□□□ -1.05
NR1I3-224ENST00000507215 SPEF2Q9C093 1822 aa8.5□□□□□ -1.05
NR1I3-224ENST00000507215 PI4KAP2A4QPH2 592 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 CSF1RP07333 972 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 GJB1P08034 283 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 CTSHP09668 335 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 GJA8P48165 433 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 RBM5P52756 815 aaKnown RBP eCLIP8.49□□□□□ -1.05
NR1I3-224ENST00000507215 UBXN2AP68543 259 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 HDLBPQ00341 1268 aaKnown RBP8.49□□□□□ -1.05
NR1I3-224ENST00000507215 CHRNDQ07001 517 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 SNAPC2Q13487 334 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 UBE3BQ7Z3V4 1068 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 ERO1BQ86YB8 467 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 TMEM130Q8N3G9 435 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 PI4KAP1Q8N8J0 262 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.49□□□□□ -1.05
NR1I3-224ENST00000507215 STK35Q8TDR2 534 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 BRI3BPQ8WY22 251 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 SPOCK3Q9BQ16 436 aa8.49□□□□□ -1.05
NR1I3-224ENST00000507215 SRCIN1Q9C0H9 1055 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms