RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 NPY5RQ15761 445 aa10.15□□□□□ -0.78
SCAMP1-202ENST00000506858 TKFCQ3LXA3 575 aa10.15□□□□□ -0.78
SCAMP1-202ENST00000506858 FOXD4L5Q5VV16 416 aaPredicted RBP10.15□□□□□ -0.78
SCAMP1-202ENST00000506858 KRT40Q6A162 431 aa10.15□□□□□ -0.78
SCAMP1-202ENST00000506858 DPP9Q86TI2 863 aa10.15□□□□□ -0.78
SCAMP1-202ENST00000506858 FOXD4L4Q8WXT5 416 aaPredicted RBP10.15□□□□□ -0.78
SCAMP1-202ENST00000506858 UIMC1Q96RL1 719 aa10.15□□□□□ -0.78
SCAMP1-202ENST00000506858 DNAJC25-GNG10A0A024R161 153 aa10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 SLC15A5A6NIM6 579 aa10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 GCOM1H8Y6P7 765 aaPredicted RBP10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 HSP90AA1P07900 732 aaKnown RBP10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 POLR2MP0CAP2 368 aa10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 EIF2AK2P19525 551 aaKnown RBP10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 ADCY7P51828 1080 aa10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 MAP2K5Q13163 448 aa10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 NR5A1Q13285 461 aa10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 EARS2Q5JPH6 523 aaKnown RBP10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 PRAMEF19Q5SWL8 479 aa10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 IL31RAQ8NI17 732 aa10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 USP6NLQ92738 828 aa10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 C8orf76Q96K31 380 aa10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 NUDT12Q9BQG2 462 aa10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 SRRDQ9UH36 339 aa10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 PTCH2Q9Y6C5 1203 aa10.15□□□□□ -0.79
SCAMP1-202ENST00000506858 ZNFX1Q9P2E3 1918 aaKnown RBP10.14□□□□□ -0.79
SCAMP1-202ENST00000506858 PTGS1P23219 599 aa10.14□□□□□ -0.79
SCAMP1-202ENST00000506858 CYP2C19P33261 490 aa10.14□□□□□ -0.79
SCAMP1-202ENST00000506858 HSD17B4P51659 736 aa10.14□□□□□ -0.79
SCAMP1-202ENST00000506858 ZNF792Q3KQV3 632 aa10.14□□□□□ -0.79
SCAMP1-202ENST00000506858 EEPD1Q7L9B9 569 aa10.14□□□□□ -0.79
SCAMP1-202ENST00000506858 PDCD7Q8N8D1 485 aaKnown RBP10.14□□□□□ -0.79
SCAMP1-202ENST00000506858 FAM133AQ8N9E0 248 aa10.14□□□□□ -0.79
SCAMP1-202ENST00000506858 PHF20Q9BVI0 1012 aa10.14□□□□□ -0.79
SCAMP1-202ENST00000506858 RIC8AQ9NPQ8 531 aa10.14□□□□□ -0.79
SCAMP1-202ENST00000506858 RBM27Q9P2N5 1060 aaKnown RBP10.14□□□□□ -0.79
SCAMP1-202ENST00000506858 FBXO40Q9UH90 709 aa10.14□□□□□ -0.79
SCAMP1-202ENST00000506858 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.14□□□□□ -0.79
SCAMP1-202ENST00000506858 BTBD18B2RXH4 712 aa10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 KIF28PB7ZC32 967 aa10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 STRNO43815 780 aa10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 ANP32AP39687 249 aaKnown RBP10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 MRPL12P52815 198 aaKnown RBP10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 HMGN5P82970 282 aaKnown RBP10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 PKP1Q13835 747 aa10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 TMEM63BQ5T3F8 832 aa10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 LARP1BQ659C4 914 aaKnown RBP10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 MCF2L2Q86YR7 1114 aa10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 SH3TC2Q8TF17 1288 aa10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 CUL5Q93034 780 aa10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 RMDN3Q96TC7 470 aa10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 ZMYND12Q9H0C1 365 aa10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 C6orf50Q9HD87 102 aa10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 PCDHA6Q9UN73 950 aa10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 PCDHA4Q9UN74 947 aa10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 PCDHA8Q9Y5H6 950 aa10.13□□□□□ -0.79
SCAMP1-202ENST00000506858 PLXNB2O15031 1838 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 EDIL3O43854 480 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 MYCLP12524 364 aaPredicted RBP10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 COPB2P35606 906 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 BECN1Q14457 450 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 MCTP1Q6DN14 999 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 FERMT3Q86UX7 667 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 DIS3L2Q8IYB7 885 aaKnown RBP10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 BLIDQ8IZY5 108 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 IL27Q8NEV9 243 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 FBXO18Q8NFZ0 1043 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 RAET1EQ8TD07 263 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 TRIB2Q92519 343 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 WASF1Q92558 559 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 RNF25Q96BH1 459 aaPredicted RBP10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 MAML3Q96JK9 1138 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 RTEL1Q9NZ71 1219 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 MGAMO43451 1857 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 BRCA2P51587 3418 aa10.12□□□□□ -0.79
SCAMP1-202ENST00000506858 VPS37CA5D8V6 355 aaPredicted RBP10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 WNT7AO00755 349 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 ADCY3O60266 1144 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 SORBS3O60504 671 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 MMP1P03956 469 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 ATP2B1P20020 1258 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 SYT1P21579 422 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 HOXD10P28358 340 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 RGS2P41220 211 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 ALDH5A1P51649 535 aaPredicted RBP10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 TRIM29Q14134 588 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 ARHGEF16Q5VV41 709 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 PPP1R18Q6NYC8 613 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 ABRAQ8N0Z2 381 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 REXO1Q8N1G1 1221 aaKnown RBP10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 RGS22Q8NE09 1264 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 CCDC148Q8NFR7 591 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 CYP2W1Q8TAV3 490 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 INTS4Q96HW7 963 aaKnown RBP10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 SH3GLB2Q9NR46 395 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 PXMP2Q9NR77 195 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 PDGFCQ9NRA1 345 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 PNMA2Q9UL42 364 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 PTPN22Q9Y2R2 807 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 PFASO15067 1338 aa10.11□□□□□ -0.79
SCAMP1-202ENST00000506858 ESYT2A0FGR8 921 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms