RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 PNLIPP16233 465 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 TAL1P17542 331 aaPredicted RBP5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 SDHBP21912 280 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 CORO7P57737 925 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 GPR85P60893 370 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 LSAMPQ13449 338 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 TCEA2Q15560 299 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 KCNMB1Q16558 191 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 LBX2Q6XYB7 198 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 C16orf86Q6ZW13 317 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 MAMDC2Q7Z304 686 aaPredicted RBP5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 ZSWIM9Q86XI8 627 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 IFNL3Q8IZI9 196 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 LZTR1Q8N653 840 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 MTA3Q9BTC8 594 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 MRPL4Q9BYD3 311 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 CRTAC1Q9NQ79 661 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 YBX2Q9Y2T7 364 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 PCDHA8Q9Y5H6 950 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 CD2APQ9Y5K6 639 aa5.94□□□□□ -1.46
TOPBP1-204ENST00000505804 CADPSQ9ULU8 1353 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 C22orf46C9J442 243 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 AQP7O14520 342 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 CRTAMO95727 393 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 GLI1P08151 1106 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 ITGB5P18084 799 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 FPR2P25090 351 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 HSD3B2P26439 372 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 ARL4AP40617 200 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 GTF2A2P52657 109 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 BICRALQ6AI39 1079 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 PLEKHO2Q8TD55 490 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 FAM168AQ92567 244 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 TRMT2BQ96GJ1 504 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 TMEM169Q96HH4 297 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 ZFYVE21Q9BQ24 234 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 PPARGC1AQ9UBK2 798 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 PCDHA9Q9Y5H5 950 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 SHROOM4Q9ULL8 1493 aa5.93□□□□□ -1.46
TOPBP1-204ENST00000505804 CARMIL2Q6F5E8 1435 aa5.92□□□□□ -1.46
TOPBP1-204ENST00000505804 EFCAB14O75071 495 aa5.92□□□□□ -1.46
TOPBP1-204ENST00000505804 JUNBP17275 347 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-204ENST00000505804 GUCY1A3Q02108 690 aa5.92□□□□□ -1.46
TOPBP1-204ENST00000505804 PABPC4Q13310 644 aaKnown RBP eCLIP5.92□□□□□ -1.46
TOPBP1-204ENST00000505804 FNDC3BQ53EP0 1204 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-204ENST00000505804 TRIM61Q5EBN2 209 aa5.92□□□□□ -1.46
TOPBP1-204ENST00000505804 FGD2Q7Z6J4 655 aa5.92□□□□□ -1.46
TOPBP1-204ENST00000505804 NLRP10Q86W26 655 aa5.92□□□□□ -1.46
TOPBP1-204ENST00000505804 SYNPOQ8N3V7 929 aa5.92□□□□□ -1.46
TOPBP1-204ENST00000505804 GSTCDQ8NEC7 633 aa5.92□□□□□ -1.46
TOPBP1-204ENST00000505804 SCLYQ96I15 445 aa5.92□□□□□ -1.46
TOPBP1-204ENST00000505804 JAM3Q9BX67 310 aa5.92□□□□□ -1.46
TOPBP1-204ENST00000505804 CLDND1Q9NY35 253 aa5.92□□□□□ -1.46
TOPBP1-204ENST00000505804 SFMBT1Q9UHJ3 866 aa5.92□□□□□ -1.46
TOPBP1-204ENST00000505804 ZNF503-AS2A6NEH8 195 aa5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 KCNQ2O43526 872 aa5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 NTRK1P04629 796 aa5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 PDE6BP35913 854 aa5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 PLEKHG4Q58EX7 1191 aa5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 ADGRF1Q5T601 910 aa5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 BRAPQ7Z569 592 aa5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 KIAA0907Q7Z7F0 614 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 MTDHQ86UE4 582 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 LIN37Q96GY3 246 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 INTS4Q96HW7 963 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 MAGEB10Q96LZ2 347 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 CDIP1Q9H305 208 aa5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 RXFP1Q9HBX9 757 aa5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 TRIM39Q9HCM9 518 aa5.91□□□□□ -1.46
TOPBP1-204ENST00000505804 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 H7BY64 318 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 RASGRP1O95267 797 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 SOD2P04179 222 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 GLI4P10075 376 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 SDSP20132 328 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 GYS2P54840 703 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 ERVFRD-1P60508 538 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 KIZQ2M2Z5 673 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 DALRD3Q5D0E6 543 aaKnown RBP5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 EGFLAMQ63HQ2 1017 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 MPZL3Q6UWV2 235 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 FEZ1Q99689 392 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 KCNJ15Q99712 375 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 ALG1Q9BT22 464 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 SLC6A17Q9H1V8 727 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 TNFRSF12AQ9NP84 129 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 X6R8D5 127 aa5.9□□□□□ -1.46
TOPBP1-204ENST00000505804 ZC3H12DA2A288 527 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-204ENST00000505804 NUDT19A8MXV4 375 aa5.89□□□□□ -1.47
TOPBP1-204ENST00000505804 RFPL3O75679 317 aa5.89□□□□□ -1.47
TOPBP1-204ENST00000505804 CLSTN1O94985 981 aa5.89□□□□□ -1.47
TOPBP1-204ENST00000505804 MPOP05164 745 aa5.89□□□□□ -1.47
TOPBP1-204ENST00000505804 DBHP09172 617 aa5.89□□□□□ -1.47
TOPBP1-204ENST00000505804 SRGAP2CP0DJJ0 459 aa5.89□□□□□ -1.47
TOPBP1-204ENST00000505804 PAK1Q13153 545 aa5.89□□□□□ -1.47
TOPBP1-204ENST00000505804 XP32Q5T750 250 aa5.89□□□□□ -1.47
TOPBP1-204ENST00000505804 DHX37Q8IY37 1157 aaKnown RBP5.89□□□□□ -1.47
TOPBP1-204ENST00000505804 PCDH19Q8TAB3 1148 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms