RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 HAND2P61296 217 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 PURAQ00577 322 aaKnown RBP6.91□□□□□ -1.3
GYPB-205ENST00000505583 TTLL4Q14679 1199 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 E2F4Q16254 413 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 LRRFIP1Q32MZ4 808 aaKnown RBP6.91□□□□□ -1.3
GYPB-205ENST00000505583 DUSP28Q4G0W2 176 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 TJAP1Q5JTD0 557 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 RRP12Q5JTH9 1297 aaKnown RBP6.91□□□□□ -1.3
GYPB-205ENST00000505583 AKNAD1Q5T1N1 836 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 SYDE2Q5VT97 1194 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 TBC1D10CQ8IV04 446 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 DCAF4Q8WV16 495 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 COPS5Q92905 334 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 WDR11Q9BZH6 1224 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 VTA1Q9NP79 307 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 RAPGEFL1Q9UHV5 662 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 Q9Y3F1 56 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 LAMA4Q16363 1823 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 KIAA1217Q5T5P2 1943 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 TRIP12Q14669 1992 aaPredicted RBP6.91□□□□□ -1.3
GYPB-205ENST00000505583 TET1Q8NFU7 2136 aa6.91□□□□□ -1.3
GYPB-205ENST00000505583 MYH6P13533 1939 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 PTPDC1A2A3K4 754 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 EPOPA6NHQ4 379 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 ARIH2O95376 493 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 MYL3P08590 195 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 GOLGA8HP0CJ92 632 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 HSPD1P10809 573 aaKnown RBP6.9□□□□□ -1.3
GYPB-205ENST00000505583 TOP1P11387 765 aaKnown RBP6.9□□□□□ -1.3
GYPB-205ENST00000505583 CALML3P27482 149 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 RPS6P62753 249 aaKnown RBP6.9□□□□□ -1.3
GYPB-205ENST00000505583 TFF2Q03403 129 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 ZNF543Q08ER8 600 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 NMIQ13287 307 aaPredicted RBP6.9□□□□□ -1.3
GYPB-205ENST00000505583 ALX1Q15699 326 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 RAB30Q15771 203 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 NBPF20Q3BBV1 942 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 ANKRD45Q5TZF3 282 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 KRT40Q6A162 431 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 SMYD5Q6GMV2 418 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 SPRED2Q7Z698 418 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 DEFB128Q7Z7B8 93 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 TBC1D5Q92609 795 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 SYMPKQ92797 1274 aaKnown RBP6.9□□□□□ -1.3
GYPB-205ENST00000505583 EVI5LQ96CN4 794 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 NECAB3Q96P71 396 aaPredicted RBP6.9□□□□□ -1.3
GYPB-205ENST00000505583 DCBLD2Q96PD2 775 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 ASB2Q96Q27 587 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 CTAGE1Q96RT6 745 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 CRBNQ96SW2 442 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 GAS2L1Q99501 681 aaPredicted RBP6.9□□□□□ -1.3
GYPB-205ENST00000505583 ZKSCAN3Q9BRR0 538 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 SLC28A3Q9HAS3 691 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 TOMM22Q9NS69 142 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 CHD7Q9P2D1 2997 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 MSRAQ9UJ68 235 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 TNKSO95271 1327 aa6.9□□□□□ -1.3
GYPB-205ENST00000505583 COL4A4P53420 1690 aaPredicted RBP6.9□□□□□ -1.31
GYPB-205ENST00000505583 ZBBXA8MT70 800 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 TNFRSF10AO00220 468 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 ZEB2O60315 1214 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 SNHG28P0DPA3 235 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 EDNRBP24530 442 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 GPNMBQ14956 572 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 MCMDC2Q4G0Z9 681 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 FAM47CQ5HY64 1035 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 PPP2R2DQ66LE6 453 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 RNF207Q6ZRF8 634 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 TMCO2Q7Z6W1 182 aaPredicted RBP6.89□□□□□ -1.31
GYPB-205ENST00000505583 OR6J1Q8NGC5 347 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 ADAMTS19Q8TE59 1207 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 ATXN2LQ8WWM7 1075 aaKnown RBP6.89□□□□□ -1.31
GYPB-205ENST00000505583 MTG1Q9BT17 334 aaPredicted RBP6.89□□□□□ -1.31
GYPB-205ENST00000505583 CERS4Q9HA82 394 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 HELLSQ9NRZ9 838 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 TCP11L1Q9NUJ3 509 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 COL20A1Q9P218 1284 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 THEGQ9P2T0 379 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 ADD3Q9UEY8 706 aaKnown RBP6.89□□□□□ -1.31
GYPB-205ENST00000505583 SLC4A7Q9Y6M7 1214 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 NEDD4P46934 1319 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 MYH7BA7E2Y1 1941 aa6.89□□□□□ -1.31
GYPB-205ENST00000505583 TTC28Q96AY4 2481 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 CCDC171Q6TFL3 1326 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 A6NJR5 290 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 CA3P07451 260 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 IQCF3P0C7M6 154 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 TXNP10599 105 aaKnown RBP6.88□□□□□ -1.31
GYPB-205ENST00000505583 ATP2A2P16615 1042 aaKnown RBP6.88□□□□□ -1.31
GYPB-205ENST00000505583 KCNQ1P51787 676 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 RRP1P56182 461 aaKnown RBP6.88□□□□□ -1.31
GYPB-205ENST00000505583 CHMP4BP1P59074 171 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 PDE4DQ08499 809 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 TCTN1Q2MV58 587 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 USH1GQ495M9 461 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 PPP4R3BQ5MIZ7 849 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 CCDC62Q6P9F0 684 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 RPUSD2Q8IZ73 545 aaKnown RBP6.88□□□□□ -1.31
GYPB-205ENST00000505583 MICALL1Q8N3F8 863 aa6.88□□□□□ -1.31
GYPB-205ENST00000505583 TAAR1Q96RJ0 339 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms